RNA–Protein interactions for RNA: ENST00000600689.1

UPF1-210, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-210ENST00000600689 OR4K2Q8NGD2 314 aa18.04■□□□□ 0.48
UPF1-210ENST00000600689 UGT2B28Q9BY64 529 aa18.04■□□□□ 0.48
UPF1-210ENST00000600689 ZBTB20Q9HC78 741 aaPredicted RBP18.04■□□□□ 0.48
UPF1-210ENST00000600689 PRM3Q9NNZ6 103 aa18.04■□□□□ 0.48
UPF1-210ENST00000600689 TAS2R13Q9NYV9 303 aa18.04■□□□□ 0.48
UPF1-210ENST00000600689 INTS6Q9UL03 887 aaKnown RBP18.04■□□□□ 0.48
UPF1-210ENST00000600689 PCDHB14Q9Y5E9 798 aa18.04■□□□□ 0.48
UPF1-210ENST00000600689 A0A1W2PQH9 124 aa18.03■□□□□ 0.48
UPF1-210ENST00000600689 A8MV72 311 aaPredicted RBP18.03■□□□□ 0.48
UPF1-210ENST00000600689 M0QZ92 97 aa18.03■□□□□ 0.48
UPF1-210ENST00000600689 MUSKO15146 869 aa18.03■□□□□ 0.48
UPF1-210ENST00000600689 AKR1A1P14550 325 aa18.03■□□□□ 0.48
UPF1-210ENST00000600689 CD40LGP29965 261 aa18.03■□□□□ 0.48
UPF1-210ENST00000600689 DCTP40126 519 aa18.03■□□□□ 0.48
UPF1-210ENST00000600689 HK3P52790 923 aa18.03■□□□□ 0.48
UPF1-210ENST00000600689 PIK3R6Q5UE93 754 aa18.03■□□□□ 0.48
UPF1-210ENST00000600689 C10orf111Q8N326 155 aa18.03■□□□□ 0.48
UPF1-210ENST00000600689 TTC30BQ8N4P2 665 aa18.03■□□□□ 0.48
UPF1-210ENST00000600689 LINGO1Q96FE5 620 aa18.03■□□□□ 0.48
UPF1-210ENST00000600689 C3orf18Q9UK00 162 aa18.03■□□□□ 0.48
UPF1-210ENST00000600689 PCTPQ9UKL6 214 aa18.03■□□□□ 0.48
UPF1-210ENST00000600689 TRPM7Q96QT4 1865 aa18.03■□□□□ 0.48
UPF1-210ENST00000600689 LOC100506127A0A0U1RQW1 187 aa18.03■□□□□ 0.48
UPF1-210ENST00000600689 CXCR6O00574 342 aa18.03■□□□□ 0.48
UPF1-210ENST00000600689 TULP3O75386 442 aa18.03■□□□□ 0.48
UPF1-210ENST00000600689 PGLSO95336 258 aa18.03■□□□□ 0.48
UPF1-210ENST00000600689 WISP3O95389 354 aaPredicted RBP18.03■□□□□ 0.48
UPF1-210ENST00000600689 ALOX12P18054 663 aa18.03■□□□□ 0.48
UPF1-210ENST00000600689 SERPINB10P48595 397 aa18.03■□□□□ 0.48
UPF1-210ENST00000600689 PPP2R2BQ00005 443 aa18.03■□□□□ 0.48
UPF1-210ENST00000600689 EPS8Q12929 822 aa18.03■□□□□ 0.48
UPF1-210ENST00000600689 RAP1GAP2Q684P5 730 aa18.03■□□□□ 0.48
UPF1-210ENST00000600689 AKAP14Q86UN6 197 aa18.03■□□□□ 0.48
UPF1-210ENST00000600689 OR6Q1Q8NGQ2 317 aa18.03■□□□□ 0.48
UPF1-210ENST00000600689 KIAA1191Q96A73 305 aa18.03■□□□□ 0.48
UPF1-210ENST00000600689 ZHX1-C8orf76Q96EF9 292 aa18.03■□□□□ 0.48
UPF1-210ENST00000600689 RBM4BQ9BQ04 359 aaKnown RBP18.03■□□□□ 0.48
UPF1-210ENST00000600689 RBM4Q9BWF3 364 aaKnown RBP18.03■□□□□ 0.48
UPF1-210ENST00000600689 MUC13Q9H3R2 512 aa18.03■□□□□ 0.48
UPF1-210ENST00000600689 ACTL8Q9H568 366 aa18.03■□□□□ 0.48
UPF1-210ENST00000600689 VNN3Q9NY84 501 aa18.03■□□□□ 0.48
UPF1-210ENST00000600689 hCG_2039718K7EN88 272 aa18.02■□□□□ 0.48
UPF1-210ENST00000600689 TLR5O60602 858 aa18.02■□□□□ 0.48
UPF1-210ENST00000600689 FAM20BO75063 409 aa18.02■□□□□ 0.48
UPF1-210ENST00000600689 GDF5P43026 501 aa18.02■□□□□ 0.48
UPF1-210ENST00000600689 MASP1P48740 699 aa18.02■□□□□ 0.48
UPF1-210ENST00000600689 LHX1P48742 406 aa18.02■□□□□ 0.48
UPF1-210ENST00000600689 COPZ1P61923 177 aa18.02■□□□□ 0.48
UPF1-210ENST00000600689 CRHR2Q13324 411 aa18.02■□□□□ 0.48
UPF1-210ENST00000600689 SPANXN4Q5MJ08 99 aa18.02■□□□□ 0.48
UPF1-210ENST00000600689 NECAB2Q7Z6G3 386 aa18.02■□□□□ 0.48
UPF1-210ENST00000600689 IFNL1Q8IU54 200 aa18.02■□□□□ 0.48
UPF1-210ENST00000600689 OR56A4Q8NGH8 313 aa18.02■□□□□ 0.48
UPF1-210ENST00000600689 GIPC2Q8TF65 315 aa18.02■□□□□ 0.48
UPF1-210ENST00000600689 TFB2MQ9H5Q4 396 aaKnown RBP18.02■□□□□ 0.48
UPF1-210ENST00000600689 RNF167Q9H6Y7 350 aa18.02■□□□□ 0.48
UPF1-210ENST00000600689 FARSBQ9NSD9 589 aaKnown RBP18.02■□□□□ 0.48
UPF1-210ENST00000600689 ANKMY1Q9P2S6 941 aa18.02■□□□□ 0.48
UPF1-210ENST00000600689 ERVK-11Q9UQG0 969 aa18.02■□□□□ 0.48
UPF1-210ENST00000600689 MGEA5O60502 916 aa18.02■□□□□ 0.48
UPF1-210ENST00000600689 MLYCDO95822 493 aa18.02■□□□□ 0.48
UPF1-210ENST00000600689 ATXN1LP0C7T5 689 aaKnown RBP18.02■□□□□ 0.48
UPF1-210ENST00000600689 EFEMP1Q12805 493 aa18.02■□□□□ 0.48
UPF1-210ENST00000600689 ABRAXAS2Q15018 415 aa18.02■□□□□ 0.48
UPF1-210ENST00000600689 HIST2H2ACQ16777 129 aaPredicted RBP18.02■□□□□ 0.48
UPF1-210ENST00000600689 THOC7Q6I9Y2 204 aaKnown RBP18.02■□□□□ 0.48
UPF1-210ENST00000600689 LRRC8DQ7L1W4 858 aa18.02■□□□□ 0.48
UPF1-210ENST00000600689 B3GNT8Q7Z7M8 397 aa18.02■□□□□ 0.48
UPF1-210ENST00000600689 GPSM1Q86YR5 675 aa18.02■□□□□ 0.48
UPF1-210ENST00000600689 ARMC8Q8IUR7 673 aa18.02■□□□□ 0.48
UPF1-210ENST00000600689 CFAP52Q8N1V2 620 aa18.02■□□□□ 0.48
UPF1-210ENST00000600689 S100ZQ8WXG8 99 aa18.02■□□□□ 0.48
UPF1-210ENST00000600689 ZIC5Q96T25 663 aa18.02■□□□□ 0.48
UPF1-210ENST00000600689 TP63Q9H3D4 680 aaPredicted RBP18.02■□□□□ 0.48
UPF1-210ENST00000600689 MAGEE1Q9HCI5 957 aa18.02■□□□□ 0.48
UPF1-210ENST00000600689 SLC6A13Q9NSD5 602 aa18.02■□□□□ 0.48
UPF1-210ENST00000600689 SMPD4Q9NXE4 827 aa18.02■□□□□ 0.48
UPF1-210ENST00000600689 MROH6A6NGR9 719 aa18.02■□□□□ 0.47
UPF1-210ENST00000600689 FGF10O15520 208 aaPredicted RBP18.02■□□□□ 0.47
UPF1-210ENST00000600689 RECQL5O94762 991 aaPredicted RBP18.02■□□□□ 0.47
UPF1-210ENST00000600689 PEX11BO96011 259 aa18.02■□□□□ 0.47
UPF1-210ENST00000600689 DNTTP04053 509 aa18.02■□□□□ 0.47
UPF1-210ENST00000600689 CD36P16671 472 aa18.02■□□□□ 0.47
UPF1-210ENST00000600689 TRPC1P48995 793 aa18.02■□□□□ 0.47
UPF1-210ENST00000600689 ALDH7A1P49419 539 aaKnown RBP18.02■□□□□ 0.47
UPF1-210ENST00000600689 ILF2Q12905 390 aaKnown RBP18.02■□□□□ 0.47
UPF1-210ENST00000600689 CLCA4Q14CN2 919 aa18.02■□□□□ 0.47
UPF1-210ENST00000600689 MAPKAPK3Q16644 382 aa18.02■□□□□ 0.47
UPF1-210ENST00000600689 BEND5Q7L4P6 421 aa18.02■□□□□ 0.47
UPF1-210ENST00000600689 DCP2Q8IU60 420 aaKnown RBP18.02■□□□□ 0.47
UPF1-210ENST00000600689 PYCR2Q96C36 320 aa18.02■□□□□ 0.47
UPF1-210ENST00000600689 DSN1Q9H410 356 aa18.02■□□□□ 0.47
UPF1-210ENST00000600689 PCDHGA10Q9Y5H3 936 aa18.02■□□□□ 0.47
UPF1-210ENST00000600689 TRPV2Q9Y5S1 764 aa18.02■□□□□ 0.47
UPF1-210ENST00000600689 MIA3Q5JRA6 1907 aa18.02■□□□□ 0.47
UPF1-210ENST00000600689 TSC2P49815 1807 aa18.01■□□□□ 0.47
UPF1-210ENST00000600689 TYW5A2RUC4 315 aaKnown RBP18.01■□□□□ 0.47
UPF1-210ENST00000600689 MOXD2PA6NHM9 499 aa18.01■□□□□ 0.47
UPF1-210ENST00000600689 VPS4BO75351 444 aa18.01■□□□□ 0.47
UPF1-210ENST00000600689 C1QCP02747 245 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms