RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 EIF2S3LQ2VIR3 472 aaKnown RBP16.68■□□□□ 0.26
SMG9-210ENST00000600097 PRR30Q53SZ7 412 aaPredicted RBP16.68■□□□□ 0.26
SMG9-210ENST00000600097 DAAM2Q86T65 1068 aa16.68■□□□□ 0.26
SMG9-210ENST00000600097 FERD3LQ96RJ6 166 aa16.68■□□□□ 0.26
SMG9-210ENST00000600097 CHP1Q99653 195 aa16.68■□□□□ 0.26
SMG9-210ENST00000600097 C19orf43Q9BQ61 176 aa16.68■□□□□ 0.26
SMG9-210ENST00000600097 C17orf62Q9BQA9 187 aa16.68■□□□□ 0.26
SMG9-210ENST00000600097 FERMT1Q9BQL6 677 aa16.68■□□□□ 0.26
SMG9-210ENST00000600097 GBA3Q9H227 469 aa16.68■□□□□ 0.26
SMG9-210ENST00000600097 NHEJ1Q9H9Q4 299 aaPredicted RBP16.68■□□□□ 0.26
SMG9-210ENST00000600097 LUZP4Q9P127 313 aa16.68■□□□□ 0.26
SMG9-210ENST00000600097 FKBPLQ9UIM3 349 aa16.68■□□□□ 0.26
SMG9-210ENST00000600097 CRLS1Q9UJA2 301 aa16.68■□□□□ 0.26
SMG9-210ENST00000600097 PRRC2CQ9Y520 2896 aaKnown RBP16.68■□□□□ 0.26
SMG9-210ENST00000600097 hCG_1818297A0A087WSY0 165 aa16.67■□□□□ 0.26
SMG9-210ENST00000600097 CCDC66A2RUB6 948 aa16.67■□□□□ 0.26
SMG9-210ENST00000600097 IFRD1O00458 451 aaPredicted RBP16.67■□□□□ 0.26
SMG9-210ENST00000600097 DDX3YO15523 660 aaKnown RBP16.67■□□□□ 0.26
SMG9-210ENST00000600097 CBFA2T2O43439 604 aa16.67■□□□□ 0.26
SMG9-210ENST00000600097 ZRANB2O95218 330 aaKnown RBP eCLIP16.67■□□□□ 0.26
SMG9-210ENST00000600097 CRTAMO95727 393 aa16.67■□□□□ 0.26
SMG9-210ENST00000600097 ST6GAL1P15907 406 aa16.67■□□□□ 0.26
SMG9-210ENST00000600097 HADHAP40939 763 aa16.67■□□□□ 0.26
SMG9-210ENST00000600097 XIAPP98170 497 aa16.67■□□□□ 0.26
SMG9-210ENST00000600097 MRPL49Q13405 166 aaKnown RBP16.67■□□□□ 0.26
SMG9-210ENST00000600097 ATP1A4Q13733 1029 aa16.67■□□□□ 0.26
SMG9-210ENST00000600097 PTCHD3Q3KNS1 767 aa16.67■□□□□ 0.26
SMG9-210ENST00000600097 VWA5B1Q5TIE3 1220 aa16.67■□□□□ 0.26
SMG9-210ENST00000600097 FAM69BQ5VUD6 431 aa16.67■□□□□ 0.26
SMG9-210ENST00000600097 ITPRIPL1Q6GPH6 555 aa16.67■□□□□ 0.26
SMG9-210ENST00000600097 ZNF449Q6P9G9 518 aa16.67■□□□□ 0.26
SMG9-210ENST00000600097 SARM1Q6SZW1 724 aa16.67■□□□□ 0.26
SMG9-210ENST00000600097 RANBP10Q6VN20 620 aa16.67■□□□□ 0.26
SMG9-210ENST00000600097 GPR135Q8IZ08 494 aa16.67■□□□□ 0.26
SMG9-210ENST00000600097 RCOR2Q8IZ40 523 aa16.67■□□□□ 0.26
SMG9-210ENST00000600097 LILRA3Q8N6C8 439 aaPredicted RBP16.67■□□□□ 0.26
SMG9-210ENST00000600097 PRR7Q8TB68 274 aa16.67■□□□□ 0.26
SMG9-210ENST00000600097 NAT14Q8WUY8 206 aa16.67■□□□□ 0.26
SMG9-210ENST00000600097 HAUS1Q96CS2 278 aa16.67■□□□□ 0.26
SMG9-210ENST00000600097 COPS8Q99627 209 aa16.67■□□□□ 0.26
SMG9-210ENST00000600097 FICDQ9BVA6 458 aa16.67■□□□□ 0.26
SMG9-210ENST00000600097 TFB2MQ9H5Q4 396 aaKnown RBP16.67■□□□□ 0.26
SMG9-210ENST00000600097 MVB12BQ9H7P6 319 aa16.67■□□□□ 0.26
SMG9-210ENST00000600097 VPS37BQ9H9H4 285 aa16.67■□□□□ 0.26
SMG9-210ENST00000600097 ABHD10Q9NUJ1 306 aa16.67■□□□□ 0.26
SMG9-210ENST00000600097 A1L4Q6 167 aa16.66■□□□□ 0.26
SMG9-210ENST00000600097 C2orf74A8MZ97 194 aa16.66■□□□□ 0.26
SMG9-210ENST00000600097 BTN3A3O00478 584 aa16.66■□□□□ 0.26
SMG9-210ENST00000600097 BTN3A1O00481 513 aa16.66■□□□□ 0.26
SMG9-210ENST00000600097 ZNF749O43361 778 aa16.66■□□□□ 0.26
SMG9-210ENST00000600097 KLHL41O60662 606 aa16.66■□□□□ 0.26
SMG9-210ENST00000600097 IGHEP01854 428 aa16.66■□□□□ 0.26
SMG9-210ENST00000600097 RNF224P0DH78 156 aa16.66■□□□□ 0.26
SMG9-210ENST00000600097 ATP1B2P14415 290 aaPredicted RBP16.66■□□□□ 0.26
SMG9-210ENST00000600097 ITGALP20701 1170 aa16.66■□□□□ 0.26
SMG9-210ENST00000600097 CD151P48509 253 aa16.66■□□□□ 0.26
SMG9-210ENST00000600097 LMAN1P49257 510 aa16.66■□□□□ 0.26
SMG9-210ENST00000600097 SNX20Q7Z614 316 aa16.66■□□□□ 0.26
SMG9-210ENST00000600097 CCDC50Q8IVM0 306 aa16.66■□□□□ 0.26
SMG9-210ENST00000600097 KATNAL2Q8IYT4 538 aa16.66■□□□□ 0.26
SMG9-210ENST00000600097 IQCKQ8N0W5 287 aa16.66■□□□□ 0.26
SMG9-210ENST00000600097 NXPE1Q8N323 547 aa16.66■□□□□ 0.26
SMG9-210ENST00000600097 RNF214Q8ND24 703 aa16.66■□□□□ 0.26
SMG9-210ENST00000600097 RBM41Q96IZ5 413 aaKnown RBP16.66■□□□□ 0.26
SMG9-210ENST00000600097 TRAPPC9Q96Q05 1148 aa16.66■□□□□ 0.26
SMG9-210ENST00000600097 OR52A5Q9H2C5 316 aa16.66■□□□□ 0.26
SMG9-210ENST00000600097 COG4Q9H9E3 785 aa16.66■□□□□ 0.26
SMG9-210ENST00000600097 AAR2Q9Y312 384 aaKnown RBP16.66■□□□□ 0.26
SMG9-210ENST00000600097 ALG6Q9Y672 507 aa16.66■□□□□ 0.26
SMG9-210ENST00000600097 SEC16AO15027 2179 aa16.65■□□□□ 0.26
SMG9-210ENST00000600097 ALPPP05187 535 aa16.65■□□□□ 0.26
SMG9-210ENST00000600097 CD63P08962 238 aa16.65■□□□□ 0.26
SMG9-210ENST00000600097 SPTBP11277 2137 aa16.65■□□□□ 0.26
SMG9-210ENST00000600097 ADRA1AP35348 466 aa16.65■□□□□ 0.26
SMG9-210ENST00000600097 HADHBP55084 474 aaKnown RBP16.65■□□□□ 0.26
SMG9-210ENST00000600097 RPA4Q13156 261 aa16.65■□□□□ 0.26
SMG9-210ENST00000600097 SSPNQ14714 243 aa16.65■□□□□ 0.26
SMG9-210ENST00000600097 GPR33Q49SQ1 333 aa16.65■□□□□ 0.26
SMG9-210ENST00000600097 ZNF385CQ66K41 422 aaPredicted RBP16.65■□□□□ 0.26
SMG9-210ENST00000600097 BBS12Q6ZW61 710 aa16.65■□□□□ 0.26
SMG9-210ENST00000600097 MAMDC2Q7Z304 686 aaPredicted RBP16.65■□□□□ 0.26
SMG9-210ENST00000600097 MRGPREQ86SM8 312 aa16.65■□□□□ 0.26
SMG9-210ENST00000600097 AMIGO1Q86WK6 493 aa16.65■□□□□ 0.26
SMG9-210ENST00000600097 CLEC1AQ8NC01 280 aa16.65■□□□□ 0.26
SMG9-210ENST00000600097 OR52E1Q8NGJ3 308 aa16.65■□□□□ 0.26
SMG9-210ENST00000600097 N4BP2L2Q92802 583 aaPredicted RBP16.65■□□□□ 0.26
SMG9-210ENST00000600097 FER1L6-AS2Q96M78 137 aa16.65■□□□□ 0.26
SMG9-210ENST00000600097 B3GNT3Q9Y2A9 372 aa16.65■□□□□ 0.26
SMG9-210ENST00000600097 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.65■□□□□ 0.26
SMG9-210ENST00000600097 AP1M2Q9Y6Q5 423 aa16.65■□□□□ 0.26
SMG9-210ENST00000600097 HIVEP3Q5T1R4 2406 aa16.64■□□□□ 0.25
SMG9-210ENST00000600097 WIPF3A6NGB9 483 aa16.64■□□□□ 0.25
SMG9-210ENST00000600097 H7C0C1 242 aa16.64■□□□□ 0.25
SMG9-210ENST00000600097 APOC4-APOC2K7ER74 178 aa16.64■□□□□ 0.25
SMG9-210ENST00000600097 KLF7O75840 302 aaPredicted RBP16.64■□□□□ 0.25
SMG9-210ENST00000600097 APOC2P02655 101 aa16.64■□□□□ 0.25
SMG9-210ENST00000600097 RBL1P28749 1068 aa16.64■□□□□ 0.25
SMG9-210ENST00000600097 OTX2P32243 289 aa16.64■□□□□ 0.25
SMG9-210ENST00000600097 ATP5OP48047 213 aa16.64■□□□□ 0.25
SMG9-210ENST00000600097 RAPSNQ13702 412 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms