RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 CTSAP10619 480 aa22.24■■□□□ 1.15
SRRM1-222ENST00000596378 VARSP26640 1264 aaKnown RBP22.24■■□□□ 1.15
SRRM1-222ENST00000596378 CRY1Q16526 586 aa22.24■■□□□ 1.15
SRRM1-222ENST00000596378 SLC5A9Q2M3M2 681 aa22.24■■□□□ 1.15
SRRM1-222ENST00000596378 SPATS1Q496A3 300 aa22.24■■□□□ 1.15
SRRM1-222ENST00000596378 KRT80Q6KB66 452 aa22.24■■□□□ 1.15
SRRM1-222ENST00000596378 Q6ZVU0 165 aa22.24■■□□□ 1.15
SRRM1-222ENST00000596378 USP45Q70EL2 814 aa22.24■■□□□ 1.15
SRRM1-222ENST00000596378 OTOP2Q7RTS6 562 aa22.24■■□□□ 1.15
SRRM1-222ENST00000596378 BIRC7Q96CA5 298 aa22.24■■□□□ 1.15
SRRM1-222ENST00000596378 TCEAL4Q96EI5 215 aa22.24■■□□□ 1.15
SRRM1-222ENST00000596378 COPS8Q99627 209 aa22.24■■□□□ 1.15
SRRM1-222ENST00000596378 CAAP1Q9H8G2 361 aa22.24■■□□□ 1.15
SRRM1-222ENST00000596378 ZDHHC3Q9NYG2 299 aa22.24■■□□□ 1.15
SRRM1-222ENST00000596378 HS3ST2Q9Y278 367 aa22.24■■□□□ 1.15
SRRM1-222ENST00000596378 NEDD8-MDP1E9PL57 170 aa22.24■■□□□ 1.15
SRRM1-222ENST00000596378 C1SP09871 688 aa22.24■■□□□ 1.15
SRRM1-222ENST00000596378 GGT5P36269 586 aa22.24■■□□□ 1.15
SRRM1-222ENST00000596378 PYCR3Q53H96 274 aa22.24■■□□□ 1.15
SRRM1-222ENST00000596378 KREMEN2Q8NCW0 462 aa22.24■■□□□ 1.15
SRRM1-222ENST00000596378 NCSTNQ92542 709 aa22.24■■□□□ 1.15
SRRM1-222ENST00000596378 CENPNQ96H22 339 aaPredicted RBP22.24■■□□□ 1.15
SRRM1-222ENST00000596378 PPP3R2Q96LZ3 170 aa22.24■■□□□ 1.15
SRRM1-222ENST00000596378 SMOXQ9NWM0 555 aa22.24■■□□□ 1.15
SRRM1-222ENST00000596378 ANAPC2Q9UJX6 822 aa22.24■■□□□ 1.15
SRRM1-222ENST00000596378 PTPRSQ13332 1948 aa22.24■■□□□ 1.15
SRRM1-222ENST00000596378 VILLO15195 856 aa22.23■■□□□ 1.15
SRRM1-222ENST00000596378 MTX2O75431 263 aa22.23■■□□□ 1.15
SRRM1-222ENST00000596378 CXCL14O95715 111 aa22.23■■□□□ 1.15
SRRM1-222ENST00000596378 KIAA0040Q15053 153 aa22.23■■□□□ 1.15
SRRM1-222ENST00000596378 TTLL9Q3SXZ7 439 aa22.23■■□□□ 1.15
SRRM1-222ENST00000596378 LILRA6Q6PI73 481 aa22.23■■□□□ 1.15
SRRM1-222ENST00000596378 KRTCAP2Q8N6L1 136 aa22.23■■□□□ 1.15
SRRM1-222ENST00000596378 FAM47BQ8NA70 645 aa22.23■■□□□ 1.15
SRRM1-222ENST00000596378 CLHC1Q8NHS4 586 aa22.23■■□□□ 1.15
SRRM1-222ENST00000596378 SKA2Q8WVK7 121 aaPredicted RBP22.23■■□□□ 1.15
SRRM1-222ENST00000596378 TFAP2CQ92754 450 aa22.23■■□□□ 1.15
SRRM1-222ENST00000596378 CGREF1Q99674 301 aa22.23■■□□□ 1.15
SRRM1-222ENST00000596378 ANKRD60Q9BZ19 345 aa22.23■■□□□ 1.15
SRRM1-222ENST00000596378 OLAHQ9NV23 265 aa22.23■■□□□ 1.15
SRRM1-222ENST00000596378 KCTD5Q9NXV2 234 aa22.23■■□□□ 1.15
SRRM1-222ENST00000596378 B4GALT6Q9UBX8 382 aa22.23■■□□□ 1.15
SRRM1-222ENST00000596378 TMPRSS11EQ9UL52 423 aa22.23■■□□□ 1.15
SRRM1-222ENST00000596378 RNF103-CHMP3A0A140T963 221 aa22.23■■□□□ 1.15
SRRM1-222ENST00000596378 RGS14O43566 566 aa22.23■■□□□ 1.15
SRRM1-222ENST00000596378 DFNA5O60443 496 aa22.23■■□□□ 1.15
SRRM1-222ENST00000596378 ULK1O75385 1050 aa22.23■■□□□ 1.15
SRRM1-222ENST00000596378 EPB42P16452 691 aa22.23■■□□□ 1.15
SRRM1-222ENST00000596378 JAK1P23458 1154 aa22.23■■□□□ 1.15
SRRM1-222ENST00000596378 HTR1EP28566 365 aa22.23■■□□□ 1.15
SRRM1-222ENST00000596378 PPM1AP35813 382 aa22.23■■□□□ 1.15
SRRM1-222ENST00000596378 ROR2Q01974 943 aaKnown RBP22.23■■□□□ 1.15
SRRM1-222ENST00000596378 HSPA14Q0VDF9 509 aa22.23■■□□□ 1.15
SRRM1-222ENST00000596378 ZXDCQ2QGD7 858 aaPredicted RBP22.23■■□□□ 1.15
SRRM1-222ENST00000596378 INTS11Q5TA45 600 aaKnown RBP22.23■■□□□ 1.15
SRRM1-222ENST00000596378 CWF19L1Q69YN2 538 aaKnown RBP22.23■■□□□ 1.15
SRRM1-222ENST00000596378 METTL3Q86U44 580 aaKnown RBP22.23■■□□□ 1.15
SRRM1-222ENST00000596378 RGL4Q8IZJ4 473 aa22.23■■□□□ 1.15
SRRM1-222ENST00000596378 LIX1Q8N485 282 aa22.23■■□□□ 1.15
SRRM1-222ENST00000596378 GOLM1Q8NBJ4 401 aa22.23■■□□□ 1.15
SRRM1-222ENST00000596378 UBTD2Q8WUN7 234 aa22.23■■□□□ 1.15
SRRM1-222ENST00000596378 ULK4Q96C45 1275 aa22.23■■□□□ 1.15
SRRM1-222ENST00000596378 MUC13Q9H3R2 512 aa22.23■■□□□ 1.15
SRRM1-222ENST00000596378 ASAH2Q9NR71 780 aa22.23■■□□□ 1.15
SRRM1-222ENST00000596378 ARL15Q9NXU5 204 aa22.23■■□□□ 1.15
SRRM1-222ENST00000596378 VAPAQ9P0L0 249 aa22.23■■□□□ 1.15
SRRM1-222ENST00000596378 MAFFQ9ULX9 164 aa22.23■■□□□ 1.15
SRRM1-222ENST00000596378 CROCCQ5TZA2 2017 aa22.23■■□□□ 1.15
SRRM1-222ENST00000596378 ACOX3O15254 700 aa22.22■■□□□ 1.15
SRRM1-222ENST00000596378 STK16O75716 305 aa22.22■■□□□ 1.15
SRRM1-222ENST00000596378 EPORP19235 508 aa22.22■■□□□ 1.15
SRRM1-222ENST00000596378 RPIAP49247 311 aa22.22■■□□□ 1.15
SRRM1-222ENST00000596378 ATP6AP1Q15904 470 aa22.22■■□□□ 1.15
SRRM1-222ENST00000596378 CPSF6Q16630 551 aaKnown RBP eCLIP22.22■■□□□ 1.158e-10■□□□□ 9.4
SRRM1-222ENST00000596378 FAM174BQ3ZCQ3 159 aa22.22■■□□□ 1.15
SRRM1-222ENST00000596378 GLYATQ6IB77 296 aa22.22■■□□□ 1.15
SRRM1-222ENST00000596378 DNAJC14Q6Y2X3 702 aaPredicted RBP22.22■■□□□ 1.15
SRRM1-222ENST00000596378 VRK3Q8IV63 474 aa22.22■■□□□ 1.15
SRRM1-222ENST00000596378 DTWD1Q8N5C7 304 aa22.22■■□□□ 1.15
SRRM1-222ENST00000596378 C19orf43Q9BQ61 176 aa22.22■■□□□ 1.15
SRRM1-222ENST00000596378 EPB41L1Q9H4G0 881 aa22.22■■□□□ 1.15
SRRM1-222ENST00000596378 BRD9Q9H8M2 597 aa22.22■■□□□ 1.15
SRRM1-222ENST00000596378 PDE10AQ9Y233 779 aa22.22■■□□□ 1.15
SRRM1-222ENST00000596378 HELZP42694 1942 aaKnown RBP22.22■■□□□ 1.15
SRRM1-222ENST00000596378 CCDC160A6NGH7 325 aa22.22■■□□□ 1.15
SRRM1-222ENST00000596378 ARNTLO00327 626 aa22.22■■□□□ 1.15
SRRM1-222ENST00000596378 MANBAO00462 879 aa22.22■■□□□ 1.15
SRRM1-222ENST00000596378 SEC22BO75396 215 aa22.22■■□□□ 1.15
SRRM1-222ENST00000596378 RFC2P35250 354 aa22.22■■□□□ 1.15
SRRM1-222ENST00000596378 IMPG1Q17R60 797 aa22.22■■□□□ 1.15
SRRM1-222ENST00000596378 SUSD1Q6UWL2 747 aa22.22■■□□□ 1.15
SRRM1-222ENST00000596378 KLHL23Q8NBE8 558 aa22.22■■□□□ 1.15
SRRM1-222ENST00000596378 TSPAN14Q8NG11 270 aa22.22■■□□□ 1.15
SRRM1-222ENST00000596378 MCCC1Q96RQ3 725 aaPredicted RBP22.22■■□□□ 1.15
SRRM1-222ENST00000596378 RDH14Q9HBH5 336 aa22.22■■□□□ 1.15
SRRM1-222ENST00000596378 EIF3LQ9Y262 564 aaKnown RBP22.22■■□□□ 1.15
SRRM1-222ENST00000596378 TRIM43BA6NCK2 446 aa22.21■■□□□ 1.15
SRRM1-222ENST00000596378 EI24O14681 340 aa22.21■■□□□ 1.15
SRRM1-222ENST00000596378 NPPAP01160 153 aa22.21■■□□□ 1.15
SRRM1-222ENST00000596378 PWP1Q13610 501 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms