RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 UCK1Q9HA47 277 aa10.31□□□□□ -0.76
LIG1-210ENST00000596332 CDV3Q9UKY7 258 aaKnown RBP10.31□□□□□ -0.76
LIG1-210ENST00000596332 CORO1CQ9ULV4 474 aaPredicted RBP10.31□□□□□ -0.76
LIG1-210ENST00000596332 DOLKQ9UPQ8 538 aa10.31□□□□□ -0.76
LIG1-210ENST00000596332 CNOT1A5YKK6 2376 aaKnown RBP10.3□□□□□ -0.76
LIG1-210ENST00000596332 A0A087WUV0 522 aaPredicted RBP10.3□□□□□ -0.76
LIG1-210ENST00000596332 IGHV1OR21-1A0A087WYE8 117 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 CPED1A4D0V7 1026 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 PDZK1P1A8MUH7 402 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 FOXO6A8MYZ6 492 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 GFYI3L273 518 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 PSIP1O75475 530 aaKnown RBP10.3□□□□□ -0.76
LIG1-210ENST00000596332 C1orf105O95561 183 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 TOP3BO95985 862 aaKnown RBP10.3□□□□□ -0.76
LIG1-210ENST00000596332 ALDOAP04075 364 aaKnown RBP10.3□□□□□ -0.76
LIG1-210ENST00000596332 GP1BAP07359 652 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 ITGA2BP08514 1039 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 FTH1P19P0C7X4 201 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 MCM3P25205 808 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 KCNC1P48547 511 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 NOVA1P51513 510 aaKnown RBP10.3□□□□□ -0.76
LIG1-210ENST00000596332 CCL7P80098 99 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 PLOD1Q02809 727 aaPredicted RBP10.3□□□□□ -0.76
LIG1-210ENST00000596332 HHEXQ03014 270 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 ABRQ12979 859 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 NAB1Q13506 487 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 BMPR2Q13873 1038 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 GPR18Q14330 331 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 KLHL38Q2WGJ6 581 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.3□□□□□ -0.76
LIG1-210ENST00000596332 FAM45BPQ6NSW5 357 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 ADGRD1Q6QNK2 874 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 TMEM26Q6ZUK4 368 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 SH2D5Q6ZV89 423 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 NEK10Q6ZWH5 1172 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 OTOAQ7RTW8 1153 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 PIWIL4Q7Z3Z4 852 aaKnown RBP10.3□□□□□ -0.76
LIG1-210ENST00000596332 SPRED1Q7Z699 444 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 CTAGE3PQ8IX95 158 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 MREGQ8N565 214 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 GPATCH11Q8N954 259 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 FAM45AQ8TCE6 357 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 MAPK15Q8TD08 544 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 DENND1AQ8TEH3 1009 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 JPH3Q8WXH2 748 aaPredicted RBP10.3□□□□□ -0.76
LIG1-210ENST00000596332 ASB11Q8WXH4 323 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 MRRFQ96E11 262 aaKnown RBP10.3□□□□□ -0.76
LIG1-210ENST00000596332 UBXN10Q96LJ8 280 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 C12orf66Q96MD2 445 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 PAFAH2Q99487 392 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 CCDC3Q9BQI4 270 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 TBC1D10AQ9BXI6 508 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 NSMCE4AQ9NXX6 385 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.3□□□□□ -0.76
LIG1-210ENST00000596332 SLC24A2Q9UI40 661 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 ADAMTS6Q9UKP5 1117 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 PCDHGA1Q9Y5H4 931 aa10.3□□□□□ -0.76
LIG1-210ENST00000596332 RP1P56715 2156 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 A0A1W2PNU3 283 aaPredicted RBP10.29□□□□□ -0.76
LIG1-210ENST00000596332 KPNA5O15131 536 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 PFDN6O15212 129 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 PHGDHO43175 533 aaKnown RBP10.29□□□□□ -0.76
LIG1-210ENST00000596332 PRICKLE3O43900 615 aaPredicted RBP10.29□□□□□ -0.76
LIG1-210ENST00000596332 OPA1O60313 960 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 TCEA3O75764 348 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 APOA4P06727 396 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 SLC35E2BP0CK96 405 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 MPC1LP0DKB6 136 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 HOXB3P14651 431 aaPredicted RBP10.29□□□□□ -0.76
LIG1-210ENST00000596332 ZNF37AP17032 561 aaPredicted RBP10.29□□□□□ -0.76
LIG1-210ENST00000596332 SDHBP21912 280 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 CSF2RBP32927 897 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 PHBP35232 272 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 SKIV2L2P42285 1042 aaKnown RBP10.29□□□□□ -0.76
LIG1-210ENST00000596332 GPR3P46089 330 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 SIM1P81133 766 aaPredicted RBP10.29□□□□□ -0.76
LIG1-210ENST00000596332 INSM1Q01101 510 aaPredicted RBP10.29□□□□□ -0.76
LIG1-210ENST00000596332 POU4F1Q01851 419 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 PUM1Q14671 1186 aaKnown RBP eCLIP10.29□□□□□ -0.76
LIG1-210ENST00000596332 INAVAQ3KP66 663 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 PPM1JQ5JR12 505 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 N4BP2L1Q5TBK1 243 aaPredicted RBP10.29□□□□□ -0.76
LIG1-210ENST00000596332 NKAIN2Q5VXU1 208 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 EMBQ6PCB8 327 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 CMC1Q7Z7K0 106 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 SLC9B2Q86UD5 537 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 MARCH9Q86YJ5 346 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 LRRC56Q8IYG6 542 aaPredicted RBP10.29□□□□□ -0.76
LIG1-210ENST00000596332 IQCKQ8N0W5 287 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 CYP4X1Q8N118 509 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 LINC01555Q8NAE3 123 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 OR2W6PQ8NHA6 318 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 OR5K2Q8NHB8 316 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 FLVCR1-AS1Q8TAF5 88 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 ZFPM2Q8WW38 1151 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 CDKL2Q92772 493 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 TMEM159Q96B96 161 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 ELMO2Q96JJ3 720 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 GPR78Q96P69 363 aa10.29□□□□□ -0.76
LIG1-210ENST00000596332 SLC32A1Q9H598 525 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms