RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 AKAP7Q9P0M2 348 aaPredicted RBP25.12■■□□□ 1.61
TRIM28-204ENST00000594806 EPHA6Q9UF33 1036 aa25.12■■□□□ 1.61
TRIM28-204ENST00000594806 POLG2Q9UHN1 485 aa25.12■■□□□ 1.61
TRIM28-204ENST00000594806 SPEGQ15772 3267 aa25.11■■□□□ 1.61
TRIM28-204ENST00000594806 PRAMEF33A0A0G2JMD5 474 aa25.11■■□□□ 1.61
TRIM28-204ENST00000594806 HGSO14964 777 aaPredicted RBP25.11■■□□□ 1.61
TRIM28-204ENST00000594806 KDM1AO60341 852 aa25.11■■□□□ 1.61
TRIM28-204ENST00000594806 HAUS5O94927 633 aa25.11■■□□□ 1.61
TRIM28-204ENST00000594806 RPN2P04844 631 aa25.11■■□□□ 1.61
TRIM28-204ENST00000594806 ATP5DP30049 168 aa25.11■■□□□ 1.61
TRIM28-204ENST00000594806 CSF2RBP32927 897 aa25.11■■□□□ 1.61
TRIM28-204ENST00000594806 MAPK9P45984 424 aa25.11■■□□□ 1.61
TRIM28-204ENST00000594806 CFHR1Q03591 330 aa25.11■■□□□ 1.61
TRIM28-204ENST00000594806 MGAT5Q09328 741 aa25.11■■□□□ 1.61
TRIM28-204ENST00000594806 PLCL1Q15111 1095 aa25.11■■□□□ 1.61
TRIM28-204ENST00000594806 ZNF574Q6ZN55 896 aaPredicted RBP25.11■■□□□ 1.61
TRIM28-204ENST00000594806 B3GNT8Q7Z7M8 397 aa25.11■■□□□ 1.61
TRIM28-204ENST00000594806 LSMEM2Q8N112 164 aa25.11■■□□□ 1.61
TRIM28-204ENST00000594806 TMEM121BQ9BXQ6 578 aaPredicted RBP25.11■■□□□ 1.61
TRIM28-204ENST00000594806 TRIT1Q9H3H1 467 aaKnown RBP25.11■■□□□ 1.61
TRIM28-204ENST00000594806 L2HGDHQ9H9P8 463 aa25.11■■□□□ 1.61
TRIM28-204ENST00000594806 ZDHHC18Q9NUE0 388 aa25.11■■□□□ 1.61
TRIM28-204ENST00000594806 MTRF1LQ9UGC7 380 aaKnown RBP25.11■■□□□ 1.61
TRIM28-204ENST00000594806 DMGDHQ9UI17 866 aaKnown RBP25.11■■□□□ 1.61
TRIM28-204ENST00000594806 CORO1CQ9ULV4 474 aaPredicted RBP25.11■■□□□ 1.61
TRIM28-204ENST00000594806 ASF1AQ9Y294 204 aa25.11■■□□□ 1.61
TRIM28-204ENST00000594806 KIF26BQ2KJY2 2108 aa25.1■■□□□ 1.61
TRIM28-204ENST00000594806 IGHV5-10-1A0A0J9YXX1 117 aa25.1■■□□□ 1.61
TRIM28-204ENST00000594806 ESYT3A0FGR9 886 aa25.1■■□□□ 1.61
TRIM28-204ENST00000594806 TMEM8BA6NDV4 472 aa25.1■■□□□ 1.61
TRIM28-204ENST00000594806 NIPSNAP2O75323 286 aa25.1■■□□□ 1.61
TRIM28-204ENST00000594806 THRAP10827 490 aa25.1■■□□□ 1.61
TRIM28-204ENST00000594806 MLLT3P42568 568 aaPredicted RBP25.1■■□□□ 1.61
TRIM28-204ENST00000594806 CAPZBP47756 277 aa25.1■■□□□ 1.61
TRIM28-204ENST00000594806 LSSP48449 732 aa25.1■■□□□ 1.61
TRIM28-204ENST00000594806 MPP1Q00013 466 aa25.1■■□□□ 1.61
TRIM28-204ENST00000594806 TTLL9Q3SXZ7 439 aa25.1■■□□□ 1.61
TRIM28-204ENST00000594806 DUS1LQ6P1R4 473 aaKnown RBP25.1■■□□□ 1.61
TRIM28-204ENST00000594806 TRMT10BQ6PF06 316 aaKnown RBP25.1■■□□□ 1.61
TRIM28-204ENST00000594806 UNQ6494/PRO21346Q6UXR6 183 aa25.1■■□□□ 1.61
TRIM28-204ENST00000594806 UNC5DQ6UXZ4 953 aa25.1■■□□□ 1.61
TRIM28-204ENST00000594806 NAPRTQ6XQN6 538 aa25.1■■□□□ 1.61
TRIM28-204ENST00000594806 TMPRSS9Q7Z410 1059 aa25.1■■□□□ 1.61
TRIM28-204ENST00000594806 CMKLR1Q99788 373 aa25.1■■□□□ 1.61
TRIM28-204ENST00000594806 SEMA6CQ9H3T2 930 aa25.1■■□□□ 1.61
TRIM28-204ENST00000594806 TFB2MQ9H5Q4 396 aaKnown RBP25.1■■□□□ 1.61
TRIM28-204ENST00000594806 POLR1BQ9H9Y6 1135 aa25.1■■□□□ 1.61
TRIM28-204ENST00000594806 OGFRQ9NZT2 677 aa25.1■■□□□ 1.61
TRIM28-204ENST00000594806 ZFATQ9P243 1243 aa25.1■■□□□ 1.61
TRIM28-204ENST00000594806 DKK4Q9UBT3 224 aa25.1■■□□□ 1.61
TRIM28-204ENST00000594806 PCDHGA8Q9Y5G5 932 aa25.1■■□□□ 1.61
TRIM28-204ENST00000594806 MN1Q10571 1320 aaPredicted RBP25.1■■□□□ 1.61
TRIM28-204ENST00000594806 TOX3O15405 576 aaPredicted RBP25.09■■□□□ 1.61
TRIM28-204ENST00000594806 C9P02748 559 aa25.09■■□□□ 1.61
TRIM28-204ENST00000594806 HOXB3P14651 431 aaPredicted RBP25.09■■□□□ 1.61
TRIM28-204ENST00000594806 MAGEA4P43358 317 aa25.09■■□□□ 1.61
TRIM28-204ENST00000594806 GBX1Q14549 363 aa25.09■■□□□ 1.61
TRIM28-204ENST00000594806 PHF19Q5T6S3 580 aa25.09■■□□□ 1.61
TRIM28-204ENST00000594806 UGT3A1Q6NUS8 523 aa25.09■■□□□ 1.61
TRIM28-204ENST00000594806 CNSTQ6PJW8 725 aa25.09■■□□□ 1.61
TRIM28-204ENST00000594806 IGF2-ASQ6U949 168 aa25.09■■□□□ 1.61
TRIM28-204ENST00000594806 SLC26A11Q86WA9 606 aa25.09■■□□□ 1.61
TRIM28-204ENST00000594806 ZBTB2Q8N680 514 aa25.09■■□□□ 1.61
TRIM28-204ENST00000594806 OR5K2Q8NHB8 316 aa25.09■■□□□ 1.61
TRIM28-204ENST00000594806 ZDHHC12Q96GR4 267 aa25.09■■□□□ 1.61
TRIM28-204ENST00000594806 AARSD1Q9BTE6 412 aaKnown RBP25.09■■□□□ 1.61
TRIM28-204ENST00000594806 SPAG6O75602 509 aa25.08■■□□□ 1.61
TRIM28-204ENST00000594806 AHSGP02765 367 aa25.08■■□□□ 1.61
TRIM28-204ENST00000594806 TYRP1P17643 537 aa25.08■■□□□ 1.61
TRIM28-204ENST00000594806 CD9P21926 228 aa25.08■■□□□ 1.61
TRIM28-204ENST00000594806 SKIV2L2P42285 1042 aaKnown RBP25.08■■□□□ 1.61
TRIM28-204ENST00000594806 CSE1LP55060 971 aaKnown RBP25.08■■□□□ 1.61
TRIM28-204ENST00000594806 ZNF549Q6P9A3 640 aa25.08■■□□□ 1.61
TRIM28-204ENST00000594806 CCDC25Q86WR0 208 aa25.08■■□□□ 1.61
TRIM28-204ENST00000594806 OOSP2Q86WS3 158 aa25.08■■□□□ 1.61
TRIM28-204ENST00000594806 PHC3Q8NDX5 983 aa25.08■■□□□ 1.61
TRIM28-204ENST00000594806 LCN9Q8WX39 176 aa25.08■■□□□ 1.61
TRIM28-204ENST00000594806 CDKL2Q92772 493 aa25.08■■□□□ 1.61
TRIM28-204ENST00000594806 CCDC74BQ96LY2 380 aa25.08■■□□□ 1.61
TRIM28-204ENST00000594806 FOPNLQ96NB1 174 aa25.08■■□□□ 1.61
TRIM28-204ENST00000594806 MATN2O00339 956 aa25.07■■□□□ 1.6
TRIM28-204ENST00000594806 VPS26AO75436 327 aa25.07■■□□□ 1.6
TRIM28-204ENST00000594806 CLCN7P51798 805 aa25.07■■□□□ 1.6
TRIM28-204ENST00000594806 CUL1Q13616 776 aa25.07■■□□□ 1.6
TRIM28-204ENST00000594806 DNTTIP2Q5QJE6 756 aaKnown RBP25.07■■□□□ 1.6
TRIM28-204ENST00000594806 C3orf62Q6ZUJ4 267 aa25.07■■□□□ 1.6
TRIM28-204ENST00000594806 NEK10Q6ZWH5 1172 aa25.07■■□□□ 1.6
TRIM28-204ENST00000594806 RAB11FIP2Q7L804 512 aa25.07■■□□□ 1.6
TRIM28-204ENST00000594806 VRK3Q8IV63 474 aa25.07■■□□□ 1.6
TRIM28-204ENST00000594806 DHRS7Q9Y394 339 aa25.07■■□□□ 1.6
TRIM28-204ENST00000594806 AK5Q9Y6K8 562 aa25.07■■□□□ 1.6
TRIM28-204ENST00000594806 CEP295Q9C0D2 2601 aa25.06■■□□□ 1.6
TRIM28-204ENST00000594806 OR5K3A6NET4 321 aa25.06■■□□□ 1.6
TRIM28-204ENST00000594806 EIF3FO00303 357 aaPredicted RBP25.06■■□□□ 1.6
TRIM28-204ENST00000594806 PLD2O14939 933 aa25.06■■□□□ 1.6
TRIM28-204ENST00000594806 CAPN5O15484 640 aaPredicted RBP25.06■■□□□ 1.6
TRIM28-204ENST00000594806 DXOO77932 396 aaKnown RBP25.06■■□□□ 1.6
TRIM28-204ENST00000594806 ANKRD34CP0C6C1 535 aa25.06■■□□□ 1.6
TRIM28-204ENST00000594806 GABRB3P28472 473 aa25.06■■□□□ 1.6
TRIM28-204ENST00000594806 SSTR1P30872 391 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms