RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 CCR3P51677 355 aa20.33■□□□□ 0.85
PNKP-203ENST00000593946 ARFIP2P53365 341 aa20.33■□□□□ 0.85
PNKP-203ENST00000593946 AQP5P55064 265 aa20.33■□□□□ 0.85
PNKP-203ENST00000593946 CDH13P55290 713 aa20.33■□□□□ 0.85
PNKP-203ENST00000593946 FAM83HQ6ZRV2 1179 aaPredicted RBP20.33■□□□□ 0.85
PNKP-203ENST00000593946 MAVSQ7Z434 540 aa20.33■□□□□ 0.85
PNKP-203ENST00000593946 TMEM145Q8NBT3 493 aa20.33■□□□□ 0.85
PNKP-203ENST00000593946 AGR3Q8TD06 166 aa20.33■□□□□ 0.85
PNKP-203ENST00000593946 UBTD2Q8WUN7 234 aa20.33■□□□□ 0.85
PNKP-203ENST00000593946 SCARF2Q96GP6 870 aaPredicted RBP20.33■□□□□ 0.85
PNKP-203ENST00000593946 EGFL8Q99944 293 aa20.33■□□□□ 0.85
PNKP-203ENST00000593946 TRIM54Q9BYV2 358 aa20.33■□□□□ 0.85
PNKP-203ENST00000593946 ZNHIT2Q9UHR6 403 aa20.33■□□□□ 0.85
PNKP-203ENST00000593946 EIF2B4Q9UI10 523 aaKnown RBP20.33■□□□□ 0.85
PNKP-203ENST00000593946 CA5BQ9Y2D0 317 aa20.33■□□□□ 0.85
PNKP-203ENST00000593946 H0Y8X5 98 aa20.33■□□□□ 0.84
PNKP-203ENST00000593946 TAPBPO15533 448 aa20.33■□□□□ 0.84
PNKP-203ENST00000593946 CYP2A7P20853 494 aa20.33■□□□□ 0.84
PNKP-203ENST00000593946 AP1S2P56377 157 aa20.33■□□□□ 0.84
PNKP-203ENST00000593946 PFN3P60673 137 aa20.33■□□□□ 0.84
PNKP-203ENST00000593946 CLCQ05315 142 aa20.33■□□□□ 0.84
PNKP-203ENST00000593946 ABRQ12979 859 aa20.33■□□□□ 0.84
PNKP-203ENST00000593946 RPA4Q13156 261 aa20.33■□□□□ 0.84
PNKP-203ENST00000593946 MBOAT1Q6ZNC8 495 aa20.33■□□□□ 0.84
PNKP-203ENST00000593946 GCNT7Q6ZNI0 430 aa20.33■□□□□ 0.84
PNKP-203ENST00000593946 CUZD1Q86UP6 607 aa20.33■□□□□ 0.84
PNKP-203ENST00000593946 SPATS2Q86XZ4 545 aaKnown RBP20.33■□□□□ 0.84
PNKP-203ENST00000593946 CAMKK1Q8N5S9 505 aa20.33■□□□□ 0.84
PNKP-203ENST00000593946 RLN3Q8WXF3 142 aa20.33■□□□□ 0.84
PNKP-203ENST00000593946 ESAMQ96AP7 390 aa20.33■□□□□ 0.84
PNKP-203ENST00000593946 GPR174Q9BXC1 333 aa20.33■□□□□ 0.84
PNKP-203ENST00000593946 TM7SF3Q9NS93 570 aa20.33■□□□□ 0.84
PNKP-203ENST00000593946 ARL15Q9NXU5 204 aa20.33■□□□□ 0.84
PNKP-203ENST00000593946 ARHGEF33A8MVX0 844 aa20.32■□□□□ 0.84
PNKP-203ENST00000593946 MATN2O00339 956 aa20.32■□□□□ 0.84
PNKP-203ENST00000593946 FSBPO95073 299 aa20.32■□□□□ 0.84
PNKP-203ENST00000593946 ANXA5P08758 320 aa20.32■□□□□ 0.84
PNKP-203ENST00000593946 TSPAN8P19075 237 aa20.32■□□□□ 0.84
PNKP-203ENST00000593946 ZXDAP98168 799 aa20.32■□□□□ 0.84
PNKP-203ENST00000593946 LCP2Q13094 533 aa20.32■□□□□ 0.84
PNKP-203ENST00000593946 NFATC4Q14934 902 aa20.32■□□□□ 0.84
PNKP-203ENST00000593946 C18orf21Q32NC0 220 aaPredicted RBP20.32■□□□□ 0.84
PNKP-203ENST00000593946 SH2D4BQ5SQS7 431 aa20.32■□□□□ 0.84
PNKP-203ENST00000593946 FRMD1Q8N878 549 aa20.32■□□□□ 0.84
PNKP-203ENST00000593946 MCOLN3Q8TDD5 553 aa20.32■□□□□ 0.84
PNKP-203ENST00000593946 BIRC7Q96CA5 298 aa20.32■□□□□ 0.84
PNKP-203ENST00000593946 TMEM79Q9BSE2 394 aa20.32■□□□□ 0.84
PNKP-203ENST00000593946 OR52A5Q9H2C5 316 aa20.32■□□□□ 0.84
PNKP-203ENST00000593946 STN1Q9H668 368 aaKnown RBP20.32■□□□□ 0.84
PNKP-203ENST00000593946 ZBTB26Q9HCK0 441 aa20.32■□□□□ 0.84
PNKP-203ENST00000593946 TNFRSF12AQ9NP84 129 aa20.32■□□□□ 0.84
PNKP-203ENST00000593946 HS3ST3A1Q9Y663 406 aa20.32■□□□□ 0.84
PNKP-203ENST00000593946 NCOR1O75376 2440 aa20.31■□□□□ 0.84
PNKP-203ENST00000593946 DCNP07585 359 aaKnown RBP20.31■□□□□ 0.84
PNKP-203ENST00000593946 HIST1H2AGP0C0S8 130 aaPredicted RBP20.31■□□□□ 0.84
PNKP-203ENST00000593946 HIST1H2ADP20671 130 aa20.31■□□□□ 0.84
PNKP-203ENST00000593946 DMPKQ09013 629 aa20.31■□□□□ 0.84
PNKP-203ENST00000593946 METTL2BQ6P1Q9 378 aaKnown RBP20.31■□□□□ 0.84
PNKP-203ENST00000593946 KIRREL3Q8IZU9 778 aa20.31■□□□□ 0.84
PNKP-203ENST00000593946 FAM160A2Q8N612 972 aaPredicted RBP20.31■□□□□ 0.84
PNKP-203ENST00000593946 HIST1H2AHQ96KK5 128 aa20.31■□□□□ 0.84
PNKP-203ENST00000593946 FOPNLQ96NB1 174 aa20.31■□□□□ 0.84
PNKP-203ENST00000593946 HIST1H2AJQ99878 128 aa20.31■□□□□ 0.84
PNKP-203ENST00000593946 TIMM29Q9BSF4 260 aa20.31■□□□□ 0.84
PNKP-203ENST00000593946 IER2Q9BTL4 223 aa20.31■□□□□ 0.84
PNKP-203ENST00000593946 H2AFJQ9BTM1 129 aa20.31■□□□□ 0.84
PNKP-203ENST00000593946 WWP1Q9H0M0 922 aa20.31■□□□□ 0.84
PNKP-203ENST00000593946 FGF22Q9HCT0 170 aa20.31■□□□□ 0.84
PNKP-203ENST00000593946 WWOXQ9NZC7 414 aa20.31■□□□□ 0.84
PNKP-203ENST00000593946 SUFUQ9UMX1 484 aa20.31■□□□□ 0.84
PNKP-203ENST00000593946 DMTF1Q9Y222 760 aa20.31■□□□□ 0.84
PNKP-203ENST00000593946 SLCO1B7G3V0H7 640 aa20.3■□□□□ 0.84
PNKP-203ENST00000593946 PRAMEF26H0Y7S4 382 aa20.3■□□□□ 0.84
PNKP-203ENST00000593946 PPP6CO00743 305 aa20.3■□□□□ 0.84
PNKP-203ENST00000593946 HDAC3O15379 428 aa20.3■□□□□ 0.84
PNKP-203ENST00000593946 CATP04040 527 aaKnown RBP20.3■□□□□ 0.84
PNKP-203ENST00000593946 ACADLP28330 430 aa20.3■□□□□ 0.84
PNKP-203ENST00000593946 GGT5P36269 586 aa20.3■□□□□ 0.84
PNKP-203ENST00000593946 NUDT1P36639 197 aa20.3■□□□□ 0.84
PNKP-203ENST00000593946 PXNP49023 591 aaPredicted RBP20.3■□□□□ 0.84
PNKP-203ENST00000593946 YPEL5P62699 121 aa20.3■□□□□ 0.84
PNKP-203ENST00000593946 SH3BP2P78314 561 aa20.3■□□□□ 0.84
PNKP-203ENST00000593946 PYCR3Q53H96 274 aa20.3■□□□□ 0.84
PNKP-203ENST00000593946 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.3■□□□□ 0.84
PNKP-203ENST00000593946 METRNLQ641Q3 311 aa20.3■□□□□ 0.84
PNKP-203ENST00000593946 TCAIMQ8N3R3 496 aa20.3■□□□□ 0.84
PNKP-203ENST00000593946 CFAP61Q8NHU2 1237 aa20.3■□□□□ 0.84
PNKP-203ENST00000593946 TRPC4APQ8TEL6 797 aa20.3■□□□□ 0.84
PNKP-203ENST00000593946 CD244Q9BZW8 370 aa20.3■□□□□ 0.84
PNKP-203ENST00000593946 SEMA4BQ9NPR2 832 aaPredicted RBP20.3■□□□□ 0.84
PNKP-203ENST00000593946 DNAJC28Q9NX36 388 aa20.3■□□□□ 0.84
PNKP-203ENST00000593946 VTI1BQ9UEU0 232 aa20.3■□□□□ 0.84
PNKP-203ENST00000593946 CACNA1IQ9P0X4 2223 aa20.3■□□□□ 0.84
PNKP-203ENST00000593946 PRSS38A1L453 326 aa20.3■□□□□ 0.84
PNKP-203ENST00000593946 PABPN1LA6NDY0 278 aaKnown RBP20.3■□□□□ 0.84
PNKP-203ENST00000593946 TMEM233B4DJY2 109 aa20.3■□□□□ 0.84
PNKP-203ENST00000593946 TOR1BO14657 336 aa20.3■□□□□ 0.84
PNKP-203ENST00000593946 MLYCDO95822 493 aa20.3■□□□□ 0.84
PNKP-203ENST00000593946 HSPA7P48741 367 aa20.3■□□□□ 0.84
PNKP-203ENST00000593946 HNMTP50135 292 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms