RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 LATS2Q9NRM7 1088 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 KCND1Q9NSA2 647 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 TLK1Q9UKI8 766 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 TP53TG5Q9Y2B4 290 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 PCDHA3Q9Y5H8 950 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 ARL5AQ9Y689 179 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 COLEC10Q9Y6Z7 277 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 NAV2Q8IVL1 2488 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 UBA6A0AVT1 1052 aaPredicted RBP10.13□□□□□ -0.79
VPS4B-207ENST00000591519 CCDC66A2RUB6 948 aa10.13□□□□□ -0.79
VPS4B-207ENST00000591519 H7C0C1 242 aa10.13□□□□□ -0.79
VPS4B-207ENST00000591519 K7EM74 188 aa10.13□□□□□ -0.79
VPS4B-207ENST00000591519 ZBTB11O95625 1053 aaPredicted RBP10.13□□□□□ -0.79
VPS4B-207ENST00000591519 CRTAMO95727 393 aa10.13□□□□□ -0.79
VPS4B-207ENST00000591519 NTRK1P04629 796 aa10.13□□□□□ -0.79
VPS4B-207ENST00000591519 MSL3P1P0C860 447 aa10.13□□□□□ -0.79
VPS4B-207ENST00000591519 EBLN1P0CF75 366 aa10.13□□□□□ -0.79
VPS4B-207ENST00000591519 CTNNA2P26232 953 aa10.13□□□□□ -0.79
VPS4B-207ENST00000591519 NDUFS1P28331 727 aa10.13□□□□□ -0.79
VPS4B-207ENST00000591519 PTPN7P35236 360 aa10.13□□□□□ -0.79
VPS4B-207ENST00000591519 ATP5OP48047 213 aa10.13□□□□□ -0.79
VPS4B-207ENST00000591519 PDE1BQ01064 536 aa10.13□□□□□ -0.79
VPS4B-207ENST00000591519 KCNAB1Q14722 419 aa10.13□□□□□ -0.79
VPS4B-207ENST00000591519 PLCL1Q15111 1095 aa10.13□□□□□ -0.79
VPS4B-207ENST00000591519 UGT8Q16880 541 aa10.13□□□□□ -0.79
VPS4B-207ENST00000591519 DNTTIP2Q5QJE6 756 aaKnown RBP10.13□□□□□ -0.79
VPS4B-207ENST00000591519 ANKRD20A2Q5SQ80 823 aa10.13□□□□□ -0.79
VPS4B-207ENST00000591519 ANKRD20A1Q5TYW2 823 aa10.13□□□□□ -0.79
VPS4B-207ENST00000591519 ANKRD20A3Q5VUR7 823 aa10.13□□□□□ -0.79
VPS4B-207ENST00000591519 IZUMO3Q5VZ72 239 aa10.13□□□□□ -0.79
VPS4B-207ENST00000591519 ITPRIPL1Q6GPH6 555 aa10.13□□□□□ -0.79
VPS4B-207ENST00000591519 DENND5AQ6IQ26 1287 aa10.13□□□□□ -0.79
VPS4B-207ENST00000591519 SYVN1Q86TM6 617 aa10.13□□□□□ -0.79
VPS4B-207ENST00000591519 TMEM135Q86UB9 458 aa10.13□□□□□ -0.79
VPS4B-207ENST00000591519 OOSP2Q86WS3 158 aa10.13□□□□□ -0.79
VPS4B-207ENST00000591519 UBL4BQ8N7F7 174 aa10.13□□□□□ -0.79
VPS4B-207ENST00000591519 ACTL9Q8TC94 416 aa10.13□□□□□ -0.79
VPS4B-207ENST00000591519 MIB2Q96AX9 1013 aa10.13□□□□□ -0.79
VPS4B-207ENST00000591519 C12orf66Q96MD2 445 aa10.13□□□□□ -0.79
VPS4B-207ENST00000591519 FERMT1Q9BQL6 677 aa10.13□□□□□ -0.79
VPS4B-207ENST00000591519 TWSG1Q9GZX9 223 aa10.13□□□□□ -0.79
VPS4B-207ENST00000591519 ACTL8Q9H568 366 aa10.13□□□□□ -0.79
VPS4B-207ENST00000591519 MLXIPLQ9NP71 852 aa10.13□□□□□ -0.79
VPS4B-207ENST00000591519 IMP3Q9NV31 184 aaKnown RBP10.13□□□□□ -0.79
VPS4B-207ENST00000591519 FEZ2Q9UHY8 353 aaPredicted RBP10.13□□□□□ -0.79
VPS4B-207ENST00000591519 FKBPLQ9UIM3 349 aa10.13□□□□□ -0.79
VPS4B-207ENST00000591519 FARSAQ9Y285 508 aaKnown RBP10.13□□□□□ -0.79
VPS4B-207ENST00000591519 BTRCQ9Y297 605 aa10.13□□□□□ -0.79
VPS4B-207ENST00000591519 CFAP20Q9Y6A4 193 aaKnown RBP10.13□□□□□ -0.79
VPS4B-207ENST00000591519 DOPEY2Q9Y3R5 2298 aa10.13□□□□□ -0.79
VPS4B-207ENST00000591519 RELNP78509 3460 aa10.12□□□□□ -0.79
VPS4B-207ENST00000591519 COL12A1Q99715 3063 aa10.12□□□□□ -0.79
VPS4B-207ENST00000591519 CDC14CA4D256 554 aa10.12□□□□□ -0.79
VPS4B-207ENST00000591519 OR6C74A6NCV1 312 aa10.12□□□□□ -0.79
VPS4B-207ENST00000591519 MATN2O00339 956 aa10.12□□□□□ -0.79
VPS4B-207ENST00000591519 DDX3YO15523 660 aaKnown RBP10.12□□□□□ -0.79
VPS4B-207ENST00000591519 RFPL1O75677 317 aa10.12□□□□□ -0.79
VPS4B-207ENST00000591519 AKT1P31749 480 aa10.12□□□□□ -0.79
VPS4B-207ENST00000591519 HADHAP40939 763 aa10.12□□□□□ -0.79
VPS4B-207ENST00000591519 PRLHRP49683 370 aa10.12□□□□□ -0.79
VPS4B-207ENST00000591519 ARL4DP49703 201 aa10.12□□□□□ -0.79
VPS4B-207ENST00000591519 KPNA2P52292 529 aaKnown RBP10.12□□□□□ -0.79
VPS4B-207ENST00000591519 RPS15P62841 145 aaKnown RBP10.12□□□□□ -0.79
VPS4B-207ENST00000591519 PRPSAP1Q14558 356 aa10.12□□□□□ -0.79
VPS4B-207ENST00000591519 GPR33Q49SQ1 333 aa10.12□□□□□ -0.79
VPS4B-207ENST00000591519 ZNF658BQ4V348 819 aaPredicted RBP10.12□□□□□ -0.79
VPS4B-207ENST00000591519 TMTC4Q5T4D3 741 aa10.12□□□□□ -0.79
VPS4B-207ENST00000591519 FAM199XQ6PEV8 388 aaPredicted RBP10.12□□□□□ -0.79
VPS4B-207ENST00000591519 CERS6Q6ZMG9 384 aa10.12□□□□□ -0.79
VPS4B-207ENST00000591519 ASB18Q6ZVZ8 466 aa10.12□□□□□ -0.79
VPS4B-207ENST00000591519 DET1Q7L5Y6 550 aa10.12□□□□□ -0.79
VPS4B-207ENST00000591519 CFAP206Q8IYR0 622 aa10.12□□□□□ -0.79
VPS4B-207ENST00000591519 TEX19Q8NA77 164 aa10.12□□□□□ -0.79
VPS4B-207ENST00000591519 SLC38A9Q8NBW4 561 aa10.12□□□□□ -0.79
VPS4B-207ENST00000591519 ACVR1CQ8NER5 493 aa10.12□□□□□ -0.79
VPS4B-207ENST00000591519 ULK4Q96C45 1275 aa10.12□□□□□ -0.79
VPS4B-207ENST00000591519 RNF31Q96EP0 1072 aa10.12□□□□□ -0.79
VPS4B-207ENST00000591519 PPP1R2P1Q96PQ5 205 aa10.12□□□□□ -0.79
VPS4B-207ENST00000591519 FICDQ9BVA6 458 aa10.12□□□□□ -0.79
VPS4B-207ENST00000591519 OSBPL8Q9BZF1 889 aa10.12□□□□□ -0.79
VPS4B-207ENST00000591519 SYTL2Q9HCH5 934 aa10.12□□□□□ -0.79
VPS4B-207ENST00000591519 C1GALT1Q9NS00 363 aa10.12□□□□□ -0.79
VPS4B-207ENST00000591519 ANKMY1Q9P2S6 941 aa10.12□□□□□ -0.79
VPS4B-207ENST00000591519 PPP2R2CQ9Y2T4 447 aa10.12□□□□□ -0.79
VPS4B-207ENST00000591519 HEBP2Q9Y5Z4 205 aa10.12□□□□□ -0.79
VPS4B-207ENST00000591519 SEC16AO15027 2179 aa10.12□□□□□ -0.79
VPS4B-207ENST00000591519 IGLV3-16A0A075B6K0 115 aa10.11□□□□□ -0.79
VPS4B-207ENST00000591519 TRBV5-4A0A0C4DH59 114 aa10.11□□□□□ -0.79
VPS4B-207ENST00000591519 H7C0S8 307 aa10.11□□□□□ -0.79
VPS4B-207ENST00000591519 MEN1O00255 615 aa10.11□□□□□ -0.79
VPS4B-207ENST00000591519 LDB2O43679 373 aa10.11□□□□□ -0.79
VPS4B-207ENST00000591519 CPNE3O75131 537 aaKnown RBP10.11□□□□□ -0.79
VPS4B-207ENST00000591519 SCRG1O75711 98 aa10.11□□□□□ -0.79
VPS4B-207ENST00000591519 ZNF189O75820 626 aaPredicted RBP10.11□□□□□ -0.79
VPS4B-207ENST00000591519 KLK3P07288 261 aaPredicted RBP10.11□□□□□ -0.79
VPS4B-207ENST00000591519 RAB40ALP0C0E4 278 aa10.11□□□□□ -0.79
VPS4B-207ENST00000591519 SLC35G4P0C7Q5 338 aa10.11□□□□□ -0.79
VPS4B-207ENST00000591519 RBP3P10745 1247 aa10.11□□□□□ -0.79
VPS4B-207ENST00000591519 RALBP11234 206 aa10.11□□□□□ -0.79
VPS4B-207ENST00000591519 ATP1B2P14415 290 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms