RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 TMLHEQ9NVH6 421 aa16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 OR2AG2A6NM03 316 aa16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 FAM25AB3EWG3 89 aa16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 FAM25CB3EWG5 89 aa16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 FAM25GB3EWG6 89 aa16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 QSOX1O00391 747 aa16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 ANXA4P09525 319 aaPredicted RBP16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 ATP6AP1Q15904 470 aa16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 C6orf136Q5SQH8 315 aa16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 CHST15Q7LFX5 561 aaPredicted RBP16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 TMPRSS11BQ86T26 416 aa16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 KHSRPQ92945 711 aaKnown RBP eCLIP16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 DNAAF2Q9NVR5 837 aaKnown RBP16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 SMOXQ9NWM0 555 aa16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 J3QRK9 145 aa16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 CREB5Q02930 508 aa16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 ARL14EPQ8N8R7 260 aaPredicted RBP16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 OR10Q1Q8NGQ4 319 aa16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 FBXL8Q96CD0 374 aa16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 TOR3AQ9H497 397 aa16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 KRCC1Q9NPI7 259 aaPredicted RBP16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 ERGIC3Q9Y282 383 aa16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 PCDH8O95206 1070 aa16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 RPL3P39023 403 aaKnown RBP16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 RFX3P48380 749 aa16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 SEPHS1P49903 392 aa16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 CBX3Q13185 183 aa16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 MEP1AQ16819 746 aa16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 MPPE1Q53F39 396 aa16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 TRIQKQ629K1 86 aa16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 MINDY1Q8N5J2 469 aa16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 NSUN3Q9H649 340 aaKnown RBP16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 EXD2Q9NVH0 621 aa16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 KDELR3O43731 214 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 OR10H3O60404 316 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 NSG1P42857 185 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 EMX2Q04743 252 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 RAB39AQ14964 217 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 RAET1GQ6H3X3 334 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 PGM2L1Q6PCE3 622 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 UBASH3BQ8TF42 649 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 UBE2E3Q969T4 207 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 TCF25Q9BQ70 676 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 RAB23Q9ULC3 237 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 COL5A3P25940 1745 aaPredicted RBP16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 NEDD8-MDP1E9PL57 170 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 EPOP01588 193 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 PRKACGP22612 351 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 PRKAG1P54619 331 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 MYBPC1Q00872 1141 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 ZDHHC20Q5W0Z9 365 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 PRR23BQ6ZRT6 265 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 CYP2U1Q7Z449 544 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 PHACTR4Q8IZ21 702 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 C2orf15Q8WU43 125 aaKnown RBP16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 L3HYPDHQ96EM0 354 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 MUS81Q96NY9 551 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 RPF2Q9H7B2 306 aaKnown RBP16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 SMURF2Q9HAU4 748 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 ASAH2Q9NR71 780 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 PGAP2Q9UHJ9 254 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 TESMINQ9Y4I5 508 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 TRIM43BA6NCK2 446 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 BMP10O95393 424 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 CYP11A1P05108 521 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 JUNP05412 331 aaKnown RBP16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 IL12AP29459 219 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 KANK2Q63ZY3 851 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 ZNF773Q6PK81 442 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 CACUL1Q86Y37 369 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 PYCR2Q96C36 320 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 GPATCH1Q9BRR8 931 aaKnown RBP16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 COL24A1Q17RW2 1714 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 ARSFP54793 590 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 SP3Q02447 781 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 FNDC3BQ53EP0 1204 aaKnown RBP16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 BLOC1S3Q6QNY0 202 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 CLDN19Q8N6F1 224 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 NACC2Q96BF6 587 aa16.81■□□□□ 0.28
SMARCA4-215ENST00000590574 LOC100130705A0A1B0GUX0 176 aa16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 NME4O00746 187 aa16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 PER2O15055 1255 aa16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 ENO2P09104 434 aaPredicted RBP16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 GK3PQ14409 553 aa16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 LRRC73Q5JTD7 316 aa16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 SPANXN4Q5MJ08 99 aa16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 ADGRF1Q5T601 910 aa16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 CYP4V2Q6ZWL3 525 aaPredicted RBP16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 ZNF280BQ86YH2 543 aa16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 KRT78Q8N1N4 520 aa16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 TAMM41Q96BW9 452 aa16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 Q96MT0 163 aa16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 INTS7Q9NVH2 962 aaKnown RBP16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 CPQQ9Y646 472 aa16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 DEF8Q6ZN54 512 aa16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 ENKURQ8TC29 256 aa16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 GSTO2Q9H4Y5 243 aa16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 EBF1Q9UH73 591 aa16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 LOC730098B7Z3J9 87 aa16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 NPPAP01160 153 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms