RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 ACSL5Q9ULC5 683 aa10.96□□□□□ -0.65
SMAD4-211ENST00000590499 PYCARDQ9ULZ3 195 aa10.96□□□□□ -0.65
SMAD4-211ENST00000590499 C17orf113A0A1B0GUU1 675 aa10.95□□□□□ -0.66
SMAD4-211ENST00000590499 SERTM1A2A2V5 107 aa10.95□□□□□ -0.66
SMAD4-211ENST00000590499 C9orf172C9J069 976 aa10.95□□□□□ -0.66
SMAD4-211ENST00000590499 UBXN7O94888 489 aa10.95□□□□□ -0.66
SMAD4-211ENST00000590499 AP2A2O94973 939 aa10.95□□□□□ -0.66
SMAD4-211ENST00000590499 GAS8O95995 478 aa10.95□□□□□ -0.66
SMAD4-211ENST00000590499 GOT2P00505 430 aaKnown RBP10.95□□□□□ -0.66
SMAD4-211ENST00000590499 C9P02748 559 aa10.95□□□□□ -0.66
SMAD4-211ENST00000590499 JMJD7P0C870 316 aa10.95□□□□□ -0.66
SMAD4-211ENST00000590499 FGF3P11487 239 aaPredicted RBP10.95□□□□□ -0.66
SMAD4-211ENST00000590499 MTHFD1P11586 935 aaKnown RBP10.95□□□□□ -0.66
SMAD4-211ENST00000590499 COILP38432 576 aaPredicted RBP10.95□□□□□ -0.66
SMAD4-211ENST00000590499 HALP42357 657 aa10.95□□□□□ -0.66
SMAD4-211ENST00000590499 ABCG1P45844 678 aa10.95□□□□□ -0.66
SMAD4-211ENST00000590499 CAPZBP47756 277 aa10.95□□□□□ -0.66
SMAD4-211ENST00000590499 GFERP55789 205 aa10.95□□□□□ -0.66
SMAD4-211ENST00000590499 CDK16Q00536 496 aa10.95□□□□□ -0.66
SMAD4-211ENST00000590499 CCDC173Q0VFZ6 552 aa10.95□□□□□ -0.66
SMAD4-211ENST00000590499 CAPRIN2Q6IMN6 1127 aaKnown RBP10.95□□□□□ -0.66
SMAD4-211ENST00000590499 AFTPHQ6ULP2 937 aa10.95□□□□□ -0.66
SMAD4-211ENST00000590499 TAS2R42Q7RTR8 314 aa10.95□□□□□ -0.66
SMAD4-211ENST00000590499 CLDN19Q8N6F1 224 aa10.95□□□□□ -0.66
SMAD4-211ENST00000590499 BMPERQ8N8U9 685 aa10.95□□□□□ -0.66
SMAD4-211ENST00000590499 AGBL5Q8NDL9 886 aa10.95□□□□□ -0.66
SMAD4-211ENST00000590499 NCSTNQ92542 709 aa10.95□□□□□ -0.66
SMAD4-211ENST00000590499 RSC1A1Q92681 617 aa10.95□□□□□ -0.66
SMAD4-211ENST00000590499 ANP32BQ92688 251 aaKnown RBP10.95□□□□□ -0.66
SMAD4-211ENST00000590499 HDAC10Q969S8 669 aa10.95□□□□□ -0.66
SMAD4-211ENST00000590499 PMEPA1Q969W9 287 aa10.95□□□□□ -0.66
SMAD4-211ENST00000590499 MAGOHBQ96A72 148 aaKnown RBP10.95□□□□□ -0.66
SMAD4-211ENST00000590499 CXorf40BQ96DE9 158 aa10.95□□□□□ -0.66
SMAD4-211ENST00000590499 CRELD1Q96HD1 420 aa10.95□□□□□ -0.66
SMAD4-211ENST00000590499 RMDN2Q96LZ7 410 aa10.95□□□□□ -0.66
SMAD4-211ENST00000590499 NAP1L3Q99457 506 aaPredicted RBP10.95□□□□□ -0.66
SMAD4-211ENST00000590499 WWP1Q9H0M0 922 aa10.95□□□□□ -0.66
SMAD4-211ENST00000590499 COG4Q9H9E3 785 aa10.95□□□□□ -0.66
SMAD4-211ENST00000590499 TREX1Q9NSU2 369 aa10.95□□□□□ -0.66
SMAD4-211ENST00000590499 FOXJ2Q9P0K8 574 aa10.95□□□□□ -0.66
SMAD4-211ENST00000590499 PSMD13Q9UNM6 376 aa10.95□□□□□ -0.66
SMAD4-211ENST00000590499 PRSS21Q9Y6M0 314 aa10.95□□□□□ -0.66
SMAD4-211ENST00000590499 KALRNO60229 2985 aa10.95□□□□□ -0.66
SMAD4-211ENST00000590499 B4E171 279 aa10.94□□□□□ -0.66
SMAD4-211ENST00000590499 AGRPO00253 132 aa10.94□□□□□ -0.66
SMAD4-211ENST00000590499 ZNF185O15231 689 aa10.94□□□□□ -0.66
SMAD4-211ENST00000590499 PRAMEF10O60809 474 aa10.94□□□□□ -0.66
SMAD4-211ENST00000590499 PHF2O75151 1096 aa10.94□□□□□ -0.66
SMAD4-211ENST00000590499 TMEM63AO94886 807 aa10.94□□□□□ -0.66
SMAD4-211ENST00000590499 KRT14P02533 472 aa10.94□□□□□ -0.66
SMAD4-211ENST00000590499 ANKRD34CP0C6C1 535 aa10.94□□□□□ -0.66
SMAD4-211ENST00000590499 TSPAN7P41732 249 aa10.94□□□□□ -0.66
SMAD4-211ENST00000590499 NSG1P42857 185 aa10.94□□□□□ -0.66
SMAD4-211ENST00000590499 MAPK9P45984 424 aa10.94□□□□□ -0.66
SMAD4-211ENST00000590499 FNTAP49354 379 aa10.94□□□□□ -0.66
SMAD4-211ENST00000590499 SESN2P58004 480 aaPredicted RBP10.94□□□□□ -0.66
SMAD4-211ENST00000590499 CRADDP78560 199 aa10.94□□□□□ -0.66
SMAD4-211ENST00000590499 SEMA3AQ14563 771 aa10.94□□□□□ -0.66
SMAD4-211ENST00000590499 TRIP13Q15645 432 aaPredicted RBP10.94□□□□□ -0.66
SMAD4-211ENST00000590499 PCID2Q5JVF3 399 aa10.94□□□□□ -0.66
SMAD4-211ENST00000590499 SAMD5Q5TGI4 173 aa10.94□□□□□ -0.66
SMAD4-211ENST00000590499 ANKRD22Q5VYY1 191 aa10.94□□□□□ -0.66
SMAD4-211ENST00000590499 DUS1LQ6P1R4 473 aaKnown RBP10.94□□□□□ -0.66
SMAD4-211ENST00000590499 LRRC8BQ6P9F7 803 aa10.94□□□□□ -0.66
SMAD4-211ENST00000590499 CCDC137Q6PK04 289 aaKnown RBP10.94□□□□□ -0.66
SMAD4-211ENST00000590499 LRRC69Q6ZNQ3 347 aa10.94□□□□□ -0.66
SMAD4-211ENST00000590499 CFAP206Q8IYR0 622 aa10.94□□□□□ -0.66
SMAD4-211ENST00000590499 PPHLN1Q8NEY8 458 aaKnown RBP10.94□□□□□ -0.66
SMAD4-211ENST00000590499 KCNE4Q8WWG9 221 aa10.94□□□□□ -0.66
SMAD4-211ENST00000590499 USP7Q93009 1102 aa10.94□□□□□ -0.66
SMAD4-211ENST00000590499 NAF1Q96HR8 494 aaKnown RBP10.94□□□□□ -0.66
SMAD4-211ENST00000590499 CCM2Q9BSQ5 444 aa10.94□□□□□ -0.66
SMAD4-211ENST00000590499 KIFC1Q9BW19 673 aa10.94□□□□□ -0.66
SMAD4-211ENST00000590499 DPH1Q9BZG8 443 aa10.94□□□□□ -0.66
SMAD4-211ENST00000590499 IL22Q9GZX6 179 aa10.94□□□□□ -0.66
SMAD4-211ENST00000590499 TSPAN10Q9H1Z9 355 aaPredicted RBP10.94□□□□□ -0.66
SMAD4-211ENST00000590499 OR52A5Q9H2C5 316 aa10.94□□□□□ -0.66
SMAD4-211ENST00000590499 MRM3Q9HC36 420 aaKnown RBP10.94□□□□□ -0.66
SMAD4-211ENST00000590499 CHRAC1Q9NRG0 131 aa10.94□□□□□ -0.66
SMAD4-211ENST00000590499 OCIAD1Q9NX40 245 aa10.94□□□□□ -0.66
SMAD4-211ENST00000590499 AKAP7Q9P0M2 348 aaPredicted RBP10.94□□□□□ -0.66
SMAD4-211ENST00000590499 PCDHGA3Q9Y5H0 932 aa10.94□□□□□ -0.66
SMAD4-211ENST00000590499 CFAP20Q9Y6A4 193 aaKnown RBP10.94□□□□□ -0.66
SMAD4-211ENST00000590499 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.93□□□□□ -0.66
SMAD4-211ENST00000590499 AP3B1O00203 1094 aa10.93□□□□□ -0.66
SMAD4-211ENST00000590499 FANCGO15287 622 aa10.93□□□□□ -0.66
SMAD4-211ENST00000590499 OR1I1O60431 355 aa10.93□□□□□ -0.66
SMAD4-211ENST00000590499 GSTM1P09488 218 aa10.93□□□□□ -0.66
SMAD4-211ENST00000590499 SLC35G4P0C7Q5 338 aa10.93□□□□□ -0.66
SMAD4-211ENST00000590499 EPXP11678 715 aa10.93□□□□□ -0.66
SMAD4-211ENST00000590499 TYRP1P17643 537 aa10.93□□□□□ -0.66
SMAD4-211ENST00000590499 TCP1P17987 556 aaKnown RBP10.93□□□□□ -0.66
SMAD4-211ENST00000590499 MGAT1P26572 445 aa10.93□□□□□ -0.66
SMAD4-211ENST00000590499 ARNTP27540 789 aa10.93□□□□□ -0.66
SMAD4-211ENST00000590499 CSTF2P33240 577 aaKnown RBP eCLIP10.93□□□□□ -0.66
SMAD4-211ENST00000590499 LEPRP48357 1165 aaKnown RBP10.93□□□□□ -0.66
SMAD4-211ENST00000590499 NPY2RP49146 381 aa10.93□□□□□ -0.66
SMAD4-211ENST00000590499 VPS41P49754 854 aa10.93□□□□□ -0.66
SMAD4-211ENST00000590499 MAPK10P53779 464 aa10.93□□□□□ -0.66
SMAD4-211ENST00000590499 GSTM4Q03013 218 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms