RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 RAD18Q9NS91 495 aa12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 SLC22A11Q9NSA0 550 aa12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 UBP1Q9NZI7 540 aa12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 SERTAD3Q9UJW9 196 aa12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 FBXL4Q9UKA2 621 aa12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 SPG11Q96JI7 2443 aa12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 MAP1AP78559 2803 aaPredicted RBP12.35□□□□□ -0.43
PRKCSH-210ENST00000589990 ANKHD1Q8IWZ3 2542 aaKnown RBP12.35□□□□□ -0.43
PRKCSH-210ENST00000589990 C19orf84I3L1E1 186 aa12.35□□□□□ -0.43
PRKCSH-210ENST00000589990 KCNJ13O60928 360 aa12.35□□□□□ -0.43
PRKCSH-210ENST00000589990 JRKO75564 520 aa12.35□□□□□ -0.43
PRKCSH-210ENST00000589990 PTGER4P35408 488 aa12.35□□□□□ -0.43
PRKCSH-210ENST00000589990 SSR1P43307 286 aaKnown RBP12.35□□□□□ -0.43
PRKCSH-210ENST00000589990 TDGF1P3P51864 188 aa12.35□□□□□ -0.43
PRKCSH-210ENST00000589990 TAS2R40P59535 323 aa12.35□□□□□ -0.43
PRKCSH-210ENST00000589990 IFI35P80217 286 aaPredicted RBP12.35□□□□□ -0.43
PRKCSH-210ENST00000589990 PIGHQ14442 188 aaPredicted RBP12.35□□□□□ -0.43
PRKCSH-210ENST00000589990 CDSNQ15517 529 aa12.35□□□□□ -0.43
PRKCSH-210ENST00000589990 ZIC1Q15915 447 aa12.35□□□□□ -0.43
PRKCSH-210ENST00000589990 PPP1R2P3Q6NXS1 205 aa12.35□□□□□ -0.43
PRKCSH-210ENST00000589990 MRPL14Q6P1L8 145 aaKnown RBP12.35□□□□□ -0.43
PRKCSH-210ENST00000589990 MICALCLQ6ZW33 695 aa12.35□□□□□ -0.43
PRKCSH-210ENST00000589990 CARFQ8N187 725 aa12.35□□□□□ -0.43
PRKCSH-210ENST00000589990 NIPA2Q8N8Q9 360 aa12.35□□□□□ -0.43
PRKCSH-210ENST00000589990 DDHD1Q8NEL9 900 aa12.35□□□□□ -0.43
PRKCSH-210ENST00000589990 BRSK1Q8TDC3 778 aa12.35□□□□□ -0.43
PRKCSH-210ENST00000589990 IP6K3Q96PC2 410 aa12.35□□□□□ -0.43
PRKCSH-210ENST00000589990 TAAR6Q96RI8 345 aa12.35□□□□□ -0.43
PRKCSH-210ENST00000589990 DPH2Q9BQC3 489 aaPredicted RBP12.35□□□□□ -0.43
PRKCSH-210ENST00000589990 TSPY26PQ9H489 355 aa12.35□□□□□ -0.43
PRKCSH-210ENST00000589990 XKR8Q9H6D3 395 aa12.35□□□□□ -0.43
PRKCSH-210ENST00000589990 RUBCNLQ9H714 662 aa12.35□□□□□ -0.43
PRKCSH-210ENST00000589990 CBX8Q9HC52 389 aa12.35□□□□□ -0.43
PRKCSH-210ENST00000589990 MRPL47Q9HD33 250 aaKnown RBP12.35□□□□□ -0.43
PRKCSH-210ENST00000589990 OLAHQ9NV23 265 aa12.35□□□□□ -0.43
PRKCSH-210ENST00000589990 ANAPC7Q9UJX3 599 aa12.35□□□□□ -0.43
PRKCSH-210ENST00000589990 KLF2Q9Y5W3 355 aaPredicted RBP12.35□□□□□ -0.43
PRKCSH-210ENST00000589990 SNRNP200O75643 2136 aaKnown RBP12.34□□□□□ -0.43
PRKCSH-210ENST00000589990 CCDC66A2RUB6 948 aa12.34□□□□□ -0.43
PRKCSH-210ENST00000589990 AGPSO00116 658 aa12.34□□□□□ -0.43
PRKCSH-210ENST00000589990 SGTAO43765 313 aa12.34□□□□□ -0.43
PRKCSH-210ENST00000589990 PMPCBO75439 489 aa12.34□□□□□ -0.43
PRKCSH-210ENST00000589990 WISP2O76076 250 aa12.34□□□□□ -0.43
PRKCSH-210ENST00000589990 CCDC172P0C7W6 258 aa12.34□□□□□ -0.43
PRKCSH-210ENST00000589990 MSL3P1P0C860 447 aa12.34□□□□□ -0.43
PRKCSH-210ENST00000589990 ITGAXP20702 1163 aa12.34□□□□□ -0.43
PRKCSH-210ENST00000589990 CHRNA4P43681 627 aa12.34□□□□□ -0.43
PRKCSH-210ENST00000589990 GABRA4P48169 554 aa12.34□□□□□ -0.43
PRKCSH-210ENST00000589990 TPM4P67936 248 aa12.34□□□□□ -0.43
PRKCSH-210ENST00000589990 TMPRSS15P98073 1019 aa12.34□□□□□ -0.43
PRKCSH-210ENST00000589990 OTUD4Q01804 1114 aaKnown RBP12.34□□□□□ -0.43
PRKCSH-210ENST00000589990 PPIDQ08752 370 aaKnown RBP12.34□□□□□ -0.43
PRKCSH-210ENST00000589990 Q0VFX4 171 aa12.34□□□□□ -0.43
PRKCSH-210ENST00000589990 PRKAA1Q13131 559 aa12.34□□□□□ -0.43
PRKCSH-210ENST00000589990 AIMP2Q13155 320 aaKnown RBP12.34□□□□□ -0.43
PRKCSH-210ENST00000589990 IQCB1Q15051 598 aa12.34□□□□□ -0.43
PRKCSH-210ENST00000589990 ASIC2Q16515 512 aa12.34□□□□□ -0.43
PRKCSH-210ENST00000589990 CYP2A13Q16696 494 aa12.34□□□□□ -0.43
PRKCSH-210ENST00000589990 ZNF630Q2M218 657 aaPredicted RBP12.34□□□□□ -0.43
PRKCSH-210ENST00000589990 ZNF324BQ6AW86 544 aaPredicted RBP12.34□□□□□ -0.43
PRKCSH-210ENST00000589990 LINC00696Q6ZRV3 163 aa12.34□□□□□ -0.43
PRKCSH-210ENST00000589990 MRGPRGQ86SM5 289 aa12.34□□□□□ -0.43
PRKCSH-210ENST00000589990 LCN9Q8WX39 176 aa12.34□□□□□ -0.43
PRKCSH-210ENST00000589990 PTERQ96BW5 349 aa12.34□□□□□ -0.43
PRKCSH-210ENST00000589990 THAP2Q9H0W7 228 aa12.34□□□□□ -0.43
PRKCSH-210ENST00000589990 ISCUQ9H1K1 167 aa12.34□□□□□ -0.43
PRKCSH-210ENST00000589990 SRMSQ9H3Y6 488 aa12.34□□□□□ -0.43
PRKCSH-210ENST00000589990 IFT80Q9P2H3 777 aaPredicted RBP12.34□□□□□ -0.43
PRKCSH-210ENST00000589990 GPN3Q9UHW5 284 aaPredicted RBP12.34□□□□□ -0.43
PRKCSH-210ENST00000589990 FBN3Q75N90 2809 aa12.34□□□□□ -0.43
PRKCSH-210ENST00000589990 MGAT4DA6NG13 374 aa12.33□□□□□ -0.44
PRKCSH-210ENST00000589990 GOLGA6L19H0YKK7 550 aa12.33□□□□□ -0.44
PRKCSH-210ENST00000589990 SOCS6O14544 535 aa12.33□□□□□ -0.44
PRKCSH-210ENST00000589990 PRICKLE3O43900 615 aaPredicted RBP12.33□□□□□ -0.44
PRKCSH-210ENST00000589990 OR2B3O76000 313 aa12.33□□□□□ -0.44
PRKCSH-210ENST00000589990 KLHL18O94889 574 aa12.33□□□□□ -0.44
PRKCSH-210ENST00000589990 NDST3O95803 873 aa12.33□□□□□ -0.44
PRKCSH-210ENST00000589990 SLC35G4P0C7Q5 338 aa12.33□□□□□ -0.44
PRKCSH-210ENST00000589990 COX6B1P14854 86 aa12.33□□□□□ -0.44
PRKCSH-210ENST00000589990 HMGCLP35914 325 aa12.33□□□□□ -0.44
PRKCSH-210ENST00000589990 DCDP81605 110 aaKnown RBP12.33□□□□□ -0.44
PRKCSH-210ENST00000589990 GSE1Q14687 1217 aa12.33□□□□□ -0.44
PRKCSH-210ENST00000589990 PPP2R5EQ16537 467 aa12.33□□□□□ -0.44
PRKCSH-210ENST00000589990 LDLRAP1Q5SW96 308 aa12.33□□□□□ -0.44
PRKCSH-210ENST00000589990 PRAMEF13Q5VWM6 474 aa12.33□□□□□ -0.44
PRKCSH-210ENST00000589990 RHBDD2Q6NTF9 364 aa12.33□□□□□ -0.44
PRKCSH-210ENST00000589990 FAM180AQ6UWF9 173 aa12.33□□□□□ -0.44
PRKCSH-210ENST00000589990 BNC2Q6ZN30 1099 aaPredicted RBP12.33□□□□□ -0.44
PRKCSH-210ENST00000589990 LUZP1Q86V48 1076 aa12.33□□□□□ -0.44
PRKCSH-210ENST00000589990 ADGRF3Q8IZF5 1079 aa12.33□□□□□ -0.44
PRKCSH-210ENST00000589990 ZNF655Q8N720 491 aaPredicted RBP12.33□□□□□ -0.44
PRKCSH-210ENST00000589990 AMER2Q8N7J2 671 aa12.33□□□□□ -0.44
PRKCSH-210ENST00000589990 KCTD6Q8NC69 237 aa12.33□□□□□ -0.44
PRKCSH-210ENST00000589990 PHC3Q8NDX5 983 aa12.33□□□□□ -0.44
PRKCSH-210ENST00000589990 ZFPM2Q8WW38 1151 aa12.33□□□□□ -0.44
PRKCSH-210ENST00000589990 FAF2Q96CS3 445 aa12.33□□□□□ -0.44
PRKCSH-210ENST00000589990 ZNF670Q9BS34 389 aa12.33□□□□□ -0.44
PRKCSH-210ENST00000589990 SYTL2Q9HCH5 934 aa12.33□□□□□ -0.44
PRKCSH-210ENST00000589990 IL17CQ9P0M4 197 aa12.33□□□□□ -0.44
PRKCSH-210ENST00000589990 NDOR1Q9UHB4 597 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms