RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 CNDP1Q96KN2 507 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 HIST1H2AJQ99878 128 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 ELAC2Q9BQ52 826 aaKnown RBP21.78■■□□□ 1.08
ATG4D-209ENST00000588857 H2AFJQ9BTM1 129 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 SLC12A9Q9BXP2 914 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 DRC3Q9H069 523 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 TM7SF3Q9NS93 570 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 SLC23A2Q9UGH3 650 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 SUFUQ9UMX1 484 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 DNAJC16Q9Y2G8 782 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 METTL12A8MUP2 240 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 STX16-NPEPL1H3BU86 382 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 GFYI3L273 518 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 STX16O14662 325 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 LAMTOR5O43504 91 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 ITM2AO43736 263 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 NPHS1O60500 1241 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 LYPLA1O75608 230 aaPredicted RBP21.78■■□□□ 1.08
ATG4D-209ENST00000588857 GUCA1CO95843 209 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 CYP2A7P20853 494 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 RPIAP49247 311 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 PYCR3Q53H96 274 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 ZNF678Q5SXM1 525 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 GKAP1Q5VSY0 366 aaPredicted RBP21.78■■□□□ 1.08
ATG4D-209ENST00000588857 ABI3BPQ7Z7G0 1075 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 MAML2Q8IZL2 1156 aaPredicted RBP21.78■■□□□ 1.08
ATG4D-209ENST00000588857 CFAP61Q8NHU2 1237 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 DLG3Q92796 817 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 SCARF2Q96GP6 870 aaPredicted RBP21.78■■□□□ 1.08
ATG4D-209ENST00000588857 EGFL8Q99944 293 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 TIMM29Q9BSF4 260 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 C20orf27Q9GZN8 174 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 DPEP2Q9H4A9 486 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 FGF22Q9HCT0 170 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 MRPL40Q9NQ50 206 aaKnown RBP21.78■■□□□ 1.08
ATG4D-209ENST00000588857 ACSS2Q9NR19 701 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 GPSM3Q9Y4H4 160 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 PRSS38A1L453 326 aa21.77■■□□□ 1.08
ATG4D-209ENST00000588857 SUPT7LO94864 414 aa21.77■■□□□ 1.08
ATG4D-209ENST00000588857 FUCA1P04066 466 aa21.77■■□□□ 1.08
ATG4D-209ENST00000588857 ACP5P13686 325 aa21.77■■□□□ 1.08
ATG4D-209ENST00000588857 MAP4P27816 1152 aaKnown RBP21.77■■□□□ 1.08
ATG4D-209ENST00000588857 GNPDA1P46926 289 aa21.77■■□□□ 1.08
ATG4D-209ENST00000588857 OVGP1Q12889 678 aa21.77■■□□□ 1.08
ATG4D-209ENST00000588857 FAM83HQ6ZRV2 1179 aaPredicted RBP21.77■■□□□ 1.08
ATG4D-209ENST00000588857 DEFB119Q8N690 84 aa21.77■■□□□ 1.08
ATG4D-209ENST00000588857 FAM174AQ8TBP5 190 aa21.77■■□□□ 1.08
ATG4D-209ENST00000588857 MCOLN3Q8TDD5 553 aa21.77■■□□□ 1.08
ATG4D-209ENST00000588857 MOCOSQ96EN8 888 aa21.77■■□□□ 1.08
ATG4D-209ENST00000588857 PHOX2BQ99453 314 aa21.77■■□□□ 1.08
ATG4D-209ENST00000588857 ARL15Q9NXU5 204 aa21.77■■□□□ 1.08
ATG4D-209ENST00000588857 PDE10AQ9Y233 779 aa21.77■■□□□ 1.08
ATG4D-209ENST00000588857 TNFRSF10CO14798 259 aa21.76■■□□□ 1.07
ATG4D-209ENST00000588857 KCNJ13O60928 360 aa21.76■■□□□ 1.07
ATG4D-209ENST00000588857 SNUPNO95149 360 aaKnown RBP21.76■■□□□ 1.07
ATG4D-209ENST00000588857 SIX3O95343 332 aaPredicted RBP21.76■■□□□ 1.07
ATG4D-209ENST00000588857 CATP04040 527 aaKnown RBP21.76■■□□□ 1.07
ATG4D-209ENST00000588857 TROVE2P10155 538 aaKnown RBP eCLIP21.76■■□□□ 1.07
ATG4D-209ENST00000588857 CD27P26842 260 aa21.76■■□□□ 1.07
ATG4D-209ENST00000588857 EEF1DP29692 281 aaKnown RBP21.76■■□□□ 1.07
ATG4D-209ENST00000588857 HOXA6P31267 233 aa21.76■■□□□ 1.07
ATG4D-209ENST00000588857 PTK2BQ14289 1009 aa21.76■■□□□ 1.07
ATG4D-209ENST00000588857 SETDB1Q15047 1291 aa21.76■■□□□ 1.07
ATG4D-209ENST00000588857 METRNLQ641Q3 311 aa21.76■■□□□ 1.07
ATG4D-209ENST00000588857 PDPRQ8NCN5 879 aa21.76■■□□□ 1.07
ATG4D-209ENST00000588857 CARS2Q9HA77 564 aaKnown RBP21.76■■□□□ 1.07
ATG4D-209ENST00000588857 AASDHPPTQ9NRN7 309 aa21.76■■□□□ 1.07
ATG4D-209ENST00000588857 KLC4Q9NSK0 619 aa21.76■■□□□ 1.07
ATG4D-209ENST00000588857 KLQ9UEF7 1012 aa21.76■■□□□ 1.07
ATG4D-209ENST00000588857 PSIP1O75475 530 aaKnown RBP21.75■■□□□ 1.07
ATG4D-209ENST00000588857 ANXA5P08758 320 aa21.75■■□□□ 1.07
ATG4D-209ENST00000588857 NAA20P61599 178 aa21.75■■□□□ 1.07
ATG4D-209ENST00000588857 ARL13AQ5H913 290 aaPredicted RBP21.75■■□□□ 1.07
ATG4D-209ENST00000588857 CDKL4Q5MAI5 379 aa21.75■■□□□ 1.07
ATG4D-209ENST00000588857 SULT1C3Q6IMI6 304 aa21.75■■□□□ 1.07
ATG4D-209ENST00000588857 FRMD7Q6ZUT3 714 aa21.75■■□□□ 1.07
ATG4D-209ENST00000588857 SPATA21Q7Z572 469 aa21.75■■□□□ 1.07
ATG4D-209ENST00000588857 OR13H1Q8NG92 308 aa21.75■■□□□ 1.07
ATG4D-209ENST00000588857 OR1E3Q8WZA6 343 aa21.75■■□□□ 1.07
ATG4D-209ENST00000588857 OR2M4Q96R27 311 aa21.75■■□□□ 1.07
ATG4D-209ENST00000588857 SORT1Q99523 831 aa21.75■■□□□ 1.07
ATG4D-209ENST00000588857 TRMOQ9BU70 441 aa21.75■■□□□ 1.07
ATG4D-209ENST00000588857 TRIM55Q9BYV6 548 aa21.75■■□□□ 1.07
ATG4D-209ENST00000588857 ILKAPQ9H0C8 392 aaPredicted RBP21.75■■□□□ 1.07
ATG4D-209ENST00000588857 EML4Q9HC35 981 aaKnown RBP21.75■■□□□ 1.07
ATG4D-209ENST00000588857 FBXO4Q9UKT5 387 aa21.75■■□□□ 1.07
ATG4D-209ENST00000588857 ACSL5Q9ULC5 683 aa21.75■■□□□ 1.07
ATG4D-209ENST00000588857 TNPO3Q9Y5L0 923 aaKnown RBP21.75■■□□□ 1.07
ATG4D-209ENST00000588857 ABCA7Q8IZY2 2146 aa21.75■■□□□ 1.07
ATG4D-209ENST00000588857 CCDC163A0A0D9SF12 145 aa21.74■■□□□ 1.07
ATG4D-209ENST00000588857 MEI4A8MW99 385 aa21.74■■□□□ 1.07
ATG4D-209ENST00000588857 TGDSO95455 350 aa21.74■■□□□ 1.07
ATG4D-209ENST00000588857 SP9P0CG40 484 aa21.74■■□□□ 1.07
ATG4D-209ENST00000588857 ARRB2P32121 409 aa21.74■■□□□ 1.07
ATG4D-209ENST00000588857 NBL1P41271 181 aa21.74■■□□□ 1.07
ATG4D-209ENST00000588857 AP1S2P56377 157 aa21.74■■□□□ 1.07
ATG4D-209ENST00000588857 CDKL1Q00532 357 aa21.74■■□□□ 1.07
ATG4D-209ENST00000588857 DMPKQ09013 629 aa21.74■■□□□ 1.07
ATG4D-209ENST00000588857 DMWDQ09019 674 aa21.74■■□□□ 1.07
ATG4D-209ENST00000588857 SF3A3Q12874 501 aaKnown RBP eCLIP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms