RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 OR8K5Q8NH50 307 aa13.32□□□□□ -0.28
HDAC5-208ENST00000588419 OR1L3Q8NH93 324 aa13.32□□□□□ -0.28
HDAC5-208ENST00000588419 N4BP2L2Q92802 583 aaPredicted RBP13.32□□□□□ -0.28
HDAC5-208ENST00000588419 DNAJC1Q96KC8 554 aaKnown RBP13.32□□□□□ -0.28
HDAC5-208ENST00000588419 CCM2Q9BSQ5 444 aa13.32□□□□□ -0.28
HDAC5-208ENST00000588419 COG4Q9H9E3 785 aa13.32□□□□□ -0.28
HDAC5-208ENST00000588419 G3BP2Q9UN86 482 aaKnown RBP13.32□□□□□ -0.28
HDAC5-208ENST00000588419 BTRCQ9Y297 605 aa13.32□□□□□ -0.28
HDAC5-208ENST00000588419 AAR2Q9Y312 384 aaKnown RBP13.32□□□□□ -0.28
HDAC5-208ENST00000588419 PCDHA13Q9Y5I0 950 aa13.32□□□□□ -0.28
HDAC5-208ENST00000588419 PCSK5Q92824 1860 aa13.31□□□□□ -0.28
HDAC5-208ENST00000588419 ICE1Q9Y2F5 2266 aa13.31□□□□□ -0.28
HDAC5-208ENST00000588419 CLEC18AA5D8T8 446 aa13.31□□□□□ -0.28
HDAC5-208ENST00000588419 KLHL33A6NCF5 533 aa13.31□□□□□ -0.28
HDAC5-208ENST00000588419 MEN1O00255 615 aa13.31□□□□□ -0.28
HDAC5-208ENST00000588419 BTN3A3O00478 584 aa13.31□□□□□ -0.28
HDAC5-208ENST00000588419 PJA2O43164 708 aa13.31□□□□□ -0.28
HDAC5-208ENST00000588419 TMEM63AO94886 807 aa13.31□□□□□ -0.28
HDAC5-208ENST00000588419 RECKO95980 971 aa13.31□□□□□ -0.28
HDAC5-208ENST00000588419 PYGMP11217 842 aa13.31□□□□□ -0.28
HDAC5-208ENST00000588419 OTX2P32243 289 aa13.31□□□□□ -0.28
HDAC5-208ENST00000588419 CDKN1CP49918 316 aaPredicted RBP13.31□□□□□ -0.28
HDAC5-208ENST00000588419 ZNF140P52738 457 aaPredicted RBP13.31□□□□□ -0.28
HDAC5-208ENST00000588419 HADHBP55084 474 aaKnown RBP13.31□□□□□ -0.28
HDAC5-208ENST00000588419 BRD3Q15059 726 aa13.31□□□□□ -0.28
HDAC5-208ENST00000588419 DEFB110Q30KQ9 67 aa13.31□□□□□ -0.28
HDAC5-208ENST00000588419 PRR30Q53SZ7 412 aaPredicted RBP13.31□□□□□ -0.28
HDAC5-208ENST00000588419 PLEKHS1Q5SXH7 462 aa13.31□□□□□ -0.28
HDAC5-208ENST00000588419 FHL5Q5TD97 284 aa13.31□□□□□ -0.28
HDAC5-208ENST00000588419 IZUMO3Q5VZ72 239 aa13.31□□□□□ -0.28
HDAC5-208ENST00000588419 CAPRIN2Q6IMN6 1127 aaKnown RBP13.31□□□□□ -0.28
HDAC5-208ENST00000588419 AADACL2Q6P093 401 aa13.31□□□□□ -0.28
HDAC5-208ENST00000588419 ZNF449Q6P9G9 518 aa13.31□□□□□ -0.28
HDAC5-208ENST00000588419 CLEC18BQ6UXF7 455 aa13.31□□□□□ -0.28
HDAC5-208ENST00000588419 SNX20Q7Z614 316 aa13.31□□□□□ -0.28
HDAC5-208ENST00000588419 TRIM73Q86UV7 250 aa13.31□□□□□ -0.28
HDAC5-208ENST00000588419 TAB3Q8N5C8 712 aaPredicted RBP13.31□□□□□ -0.28
HDAC5-208ENST00000588419 CLEC18CQ8NCF0 446 aa13.31□□□□□ -0.28
HDAC5-208ENST00000588419 OR52E1Q8NGJ3 308 aa13.31□□□□□ -0.28
HDAC5-208ENST00000588419 ZFPM2Q8WW38 1151 aa13.31□□□□□ -0.28
HDAC5-208ENST00000588419 LRRC45Q96CN5 670 aa13.31□□□□□ -0.28
HDAC5-208ENST00000588419 LINC00615Q96LM1 132 aaPredicted RBP13.31□□□□□ -0.28
HDAC5-208ENST00000588419 VPS37BQ9H9H4 285 aa13.31□□□□□ -0.28
HDAC5-208ENST00000588419 LUC7LQ9NQ29 371 aaKnown RBP13.31□□□□□ -0.28
HDAC5-208ENST00000588419 LATS2Q9NRM7 1088 aa13.31□□□□□ -0.28
HDAC5-208ENST00000588419 C1GALT1Q9NS00 363 aa13.31□□□□□ -0.28
HDAC5-208ENST00000588419 PIH1D1Q9NWS0 290 aaKnown RBP13.31□□□□□ -0.28
HDAC5-208ENST00000588419 IRAK4Q9NWZ3 460 aa13.31□□□□□ -0.28
HDAC5-208ENST00000588419 TCFL5Q9UL49 500 aa13.31□□□□□ -0.28
HDAC5-208ENST00000588419 C9J4A7 227 aa13.3□□□□□ -0.28
HDAC5-208ENST00000588419 E7EQ34 232 aa13.3□□□□□ -0.28
HDAC5-208ENST00000588419 MATN2O00339 956 aa13.3□□□□□ -0.28
HDAC5-208ENST00000588419 PDHA2P29803 388 aa13.3□□□□□ -0.28
HDAC5-208ENST00000588419 PRDX3P30048 256 aaKnown RBP13.3□□□□□ -0.28
HDAC5-208ENST00000588419 CTNNA1P35221 906 aaKnown RBP13.3□□□□□ -0.28
HDAC5-208ENST00000588419 ADRA1AP35348 466 aa13.3□□□□□ -0.28
HDAC5-208ENST00000588419 CYLC1P35663 651 aaPredicted RBP13.3□□□□□ -0.28
HDAC5-208ENST00000588419 HADHAP40939 763 aa13.3□□□□□ -0.28
HDAC5-208ENST00000588419 ATP1A4Q13733 1029 aa13.3□□□□□ -0.28
HDAC5-208ENST00000588419 LAMB3Q13751 1172 aa13.3□□□□□ -0.28
HDAC5-208ENST00000588419 FAM198BQ6UWH4 519 aa13.3□□□□□ -0.28
HDAC5-208ENST00000588419 RANBP10Q6VN20 620 aa13.3□□□□□ -0.28
HDAC5-208ENST00000588419 SERPINA9Q86WD7 417 aa13.3□□□□□ -0.28
HDAC5-208ENST00000588419 CARFQ8N187 725 aa13.3□□□□□ -0.28
HDAC5-208ENST00000588419 TC2NQ8N9U0 490 aa13.3□□□□□ -0.28
HDAC5-208ENST00000588419 FDCSPQ8NFU4 85 aa13.3□□□□□ -0.28
HDAC5-208ENST00000588419 SPATA13Q96N96 652 aa13.3□□□□□ -0.28
HDAC5-208ENST00000588419 OSBPL8Q9BZF1 889 aa13.3□□□□□ -0.28
HDAC5-208ENST00000588419 TRIM5Q9C035 493 aa13.3□□□□□ -0.28
HDAC5-208ENST00000588419 SLAMF7Q9NQ25 335 aa13.3□□□□□ -0.28
HDAC5-208ENST00000588419 PCMTD2Q9NV79 361 aa13.3□□□□□ -0.28
HDAC5-208ENST00000588419 ZDHHC3Q9NYG2 299 aa13.3□□□□□ -0.28
HDAC5-208ENST00000588419 ACTR10Q9NZ32 417 aa13.3□□□□□ -0.28
HDAC5-208ENST00000588419 ZNF451Q9Y4E5 1061 aa13.3□□□□□ -0.28
HDAC5-208ENST00000588419 PCDHGA9Q9Y5G4 932 aaKnown RBP13.3□□□□□ -0.28
HDAC5-208ENST00000588419 FLNCQ14315 2725 aa13.3□□□□□ -0.28
HDAC5-208ENST00000588419 ANKRD12Q6UB98 2062 aa13.29□□□□□ -0.28
HDAC5-208ENST00000588419 C2orf74A8MZ97 194 aa13.29□□□□□ -0.28
HDAC5-208ENST00000588419 TPH1P17752 444 aa13.29□□□□□ -0.28
HDAC5-208ENST00000588419 ACRV1P26436 265 aa13.29□□□□□ -0.28
HDAC5-208ENST00000588419 RORAP35398 523 aa13.29□□□□□ -0.28
HDAC5-208ENST00000588419 VAV2P52735 878 aa13.29□□□□□ -0.28
HDAC5-208ENST00000588419 ITGA1P56199 1179 aa13.29□□□□□ -0.28
HDAC5-208ENST00000588419 COPS2P61201 443 aa13.29□□□□□ -0.28
HDAC5-208ENST00000588419 TBX2Q13207 712 aaPredicted RBP13.29□□□□□ -0.28
HDAC5-208ENST00000588419 POU6F1Q14863 301 aa13.29□□□□□ -0.28
HDAC5-208ENST00000588419 SLC9A5Q14940 896 aa13.29□□□□□ -0.28
HDAC5-208ENST00000588419 C4orf17Q53FE4 359 aa13.29□□□□□ -0.28
HDAC5-208ENST00000588419 C1orf189Q5VU69 101 aa13.29□□□□□ -0.28
HDAC5-208ENST00000588419 SARM1Q6SZW1 724 aa13.29□□□□□ -0.28
HDAC5-208ENST00000588419 ARHGEF18Q6ZSZ5 1173 aa13.29□□□□□ -0.28
HDAC5-208ENST00000588419 AMIGO1Q86WK6 493 aa13.29□□□□□ -0.28
HDAC5-208ENST00000588419 LRFN5Q96NI6 719 aa13.29□□□□□ -0.28
HDAC5-208ENST00000588419 NUDT9Q9BW91 350 aa13.29□□□□□ -0.28
HDAC5-208ENST00000588419 NLNQ9BYT8 704 aa13.29□□□□□ -0.28
HDAC5-208ENST00000588419 OR52A5Q9H2C5 316 aa13.29□□□□□ -0.28
HDAC5-208ENST00000588419 SERTAD3Q9UJW9 196 aa13.29□□□□□ -0.28
HDAC5-208ENST00000588419 TDRKHQ9Y2W6 561 aaKnown RBP13.29□□□□□ -0.28
HDAC5-208ENST00000588419 SEC16AO15027 2179 aa13.29□□□□□ -0.28
HDAC5-208ENST00000588419 PCM1Q15154 2024 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 278.6 ms