RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 A0A1W2PQJ5 194 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 TTC26A0AVF1 554 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 NDUFS8O00217 210 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 TFECO14948 347 aaPredicted RBP5.55□□□□□ -1.52
LINC01538-201ENST00000588074 BUB1O43683 1085 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 IDH1O75874 414 aaKnown RBP5.55□□□□□ -1.52
LINC01538-201ENST00000588074 ABHD16AO95870 558 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 AVPP01185 164 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 POMCP01189 267 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 OPN1MWP04001 364 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 IFNA4P05014 189 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 CSH1P0DML2 217 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 CSH2P0DML3 217 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 OPN1MW2P0DN77 364 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 OPN1MW3P0DN78 364 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 MBL2P11226 248 aaPredicted RBP5.55□□□□□ -1.52
LINC01538-201ENST00000588074 TFEBP19484 476 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 IL12AP29459 219 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 PRDX5P30044 214 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 MAGEA4P43358 317 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 PGDP52209 483 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 CAPZA1P52907 286 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 EPHA5P54756 1037 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 ERVK-8P63133 956 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 CNTN2Q02246 1040 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 CDH17Q12864 832 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 KRT31Q15323 416 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 HADHQ16836 314 aaKnown RBP5.55□□□□□ -1.52
LINC01538-201ENST00000588074 FAM171A1Q5VUB5 890 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 ELP2Q6IA86 826 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 TYW3Q6IPR3 259 aaKnown RBP5.55□□□□□ -1.52
LINC01538-201ENST00000588074 CENPUQ71F23 418 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 LINC00523Q86TU6 105 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 GPAT4Q86UL3 456 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 FJX1Q86VR8 437 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 SLC22A16Q86VW1 577 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 NUDCD3Q8IVD9 361 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 FOXP4Q8IVH2 680 aaPredicted RBP5.55□□□□□ -1.52
LINC01538-201ENST00000588074 CHERPQ8IWX8 916 aaKnown RBP5.55□□□□□ -1.52
LINC01538-201ENST00000588074 OR8H3Q8N146 312 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 SIX6OS1Q8N1H7 587 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 CCDC185Q8N715 623 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 ZBTB44Q8NCP5 570 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 LINC00116Q8NCU8 138 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 SPATA20Q8TB22 786 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 FBLIM1Q8WUP2 373 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 ATOH1Q92858 354 aaPredicted RBP5.55□□□□□ -1.52
LINC01538-201ENST00000588074 TCEAL3Q969E4 200 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 ARHGEF26Q96DR7 871 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 MS4A14Q96JA4 679 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 CCDC17Q96LX7 622 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 PI4K2AQ9BTU6 479 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 GTPBP2Q9BX10 602 aaKnown RBP5.55□□□□□ -1.52
LINC01538-201ENST00000588074 DPH1Q9BZG8 443 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 PIGUQ9H490 435 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 COG4Q9H9E3 785 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 GPN2Q9H9Y4 310 aaPredicted RBP5.55□□□□□ -1.52
LINC01538-201ENST00000588074 CXorf21Q9HAI6 301 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 TRPV4Q9HBA0 871 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 SPACA1Q9HBV2 294 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 KLHL1Q9NR64 748 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 THUMPD1Q9NXG2 353 aaKnown RBP5.55□□□□□ -1.52
LINC01538-201ENST00000588074 GMPR2Q9P2T1 348 aaKnown RBP5.55□□□□□ -1.52
LINC01538-201ENST00000588074 CDC14AQ9UNH5 594 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 STX16O14662 325 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 RHOBTB1O94844 696 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 DEXIO95424 95 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 FTCDO95954 541 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 APOA1P02647 267 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 FGGP02679 453 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 AMY1AP04745 511 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 MCF2P10911 925 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 FDPSP14324 419 aaKnown RBP5.55□□□□□ -1.52
LINC01538-201ENST00000588074 NID1P14543 1247 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 CKMT2P17540 419 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 GDI1P31150 447 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 HNRNPH3P31942 346 aaKnown RBP5.55□□□□□ -1.52
LINC01538-201ENST00000588074 ATP5C1P36542 298 aaKnown RBP5.55□□□□□ -1.52
LINC01538-201ENST00000588074 RGS19P49795 217 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 NDST2P52849 883 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 GBX2P52951 348 aaPredicted RBP5.55□□□□□ -1.52
LINC01538-201ENST00000588074 ZNF91Q05481 1191 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 SSX2Q16385 188 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 TMEM44Q2T9K0 475 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 FGD3Q5JSP0 725 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 SFRP5Q5T4F7 317 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 GADL1Q6ZQY3 521 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 RTL4Q6ZR62 310 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 TOM1L2Q6ZVM7 507 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 LHFPL3Q86UP9 236 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 KBTBD6Q86V97 674 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 UNC5CLQ8IV45 518 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 CTAGE3PQ8IX95 158 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 GPALPP1Q8IXQ4 340 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 GPR156Q8NFN8 814 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 OR7G3Q8NG95 312 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 OR6B3Q8NGW1 331 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 POC1BQ8TC44 478 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 BRIX1Q8TDN6 353 aaKnown RBP5.55□□□□□ -1.52
LINC01538-201ENST00000588074 NXPE2Q96DL1 559 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms