RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 GVINP1Q7Z2Y8 2422 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 GOLGA4Q13439 2230 aaKnown RBP10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 EME2A4GXA9 379 aaPredicted RBP10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 PCNX2A6NKB5 2137 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 FOXO6A8MYZ6 492 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 TRIM49D1C9J1S8 452 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 IFRD1O00458 451 aaPredicted RBP10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 MATN4O95460 622 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 VIPP01282 170 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 ALDOAP04075 364 aaKnown RBP10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 CBSLP0DN79 551 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 CKMT1AP12532 417 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 SLC2A4P14672 509 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 STMN1P16949 149 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 ZNF37AP17032 561 aaPredicted RBP10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 CKMT2P17540 419 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 CBSP35520 551 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 FASLGP48023 281 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 CSRP3P50461 194 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 SLC12A2P55011 1212 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 RAB10P61026 200 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 DAB2P98082 770 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 HHEXQ03014 270 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 ILF2Q12905 390 aaKnown RBP10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 PRKG2Q13237 762 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 TTLL9Q3SXZ7 439 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 PPM1JQ5JR12 505 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 EFL1Q7Z2Z2 1120 aaKnown RBP10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 SLC9B2Q86UD5 537 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 CYP4X1Q8N118 509 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 SPATA6LQ8N4H0 392 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 OR5AR1Q8NGP9 310 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 MZB1Q8WU39 189 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 SKA2Q8WVK7 121 aaPredicted RBP10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 HNRNPLLQ8WVV9 542 aaKnown RBP10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 JPH3Q8WXH2 748 aaPredicted RBP10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 CCDC74AQ96AQ1 378 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 ZBTB9Q96C00 473 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 CXorf40BQ96DE9 158 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 LINGO1Q96FE5 620 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 FERD3LQ96RJ6 166 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 GPAMQ9HCL2 828 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 SLC40A1Q9NP59 571 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 SNX15Q9NRS6 342 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 EURLQ9NYK6 297 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 LRIT1Q9P2V4 623 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 PSMC3IPQ9P2W1 217 aaPredicted RBP10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 TBK1Q9UHD2 729 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 IKZF3Q9UKT9 509 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 CDV3Q9UKY7 258 aaKnown RBP10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 ASF1AQ9Y294 204 aa10.44□□□□□ -0.74
SMARCA4-213ENST00000587988 TLDC2A0PJX2 215 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 KRT87PA6NCN2 255 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 GIPC1O14908 333 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 TNFSF14O43557 240 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 NUDT21O43809 227 aaKnown RBP10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 TCEA3O75764 348 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 KRT38O76015 456 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 C2P06681 752 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 SNRPAP09012 282 aaKnown RBP10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 SLC35E2BP0CK96 405 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 TPBGLP0DKB5 382 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 MPC1LP0DKB6 136 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 H2AFXP16104 143 aaPredicted RBP10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 GLB1P16278 677 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 CSRP1P21291 193 aaKnown RBP10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 ACP1P24666 158 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 ATP5DP30049 168 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 MAGEA12P43365 314 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 BDKRB1P46663 353 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 RPIAP49247 311 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 ACADVLP49748 655 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 IL2P60568 153 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 DLG1Q12959 904 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 TRIP6Q15654 476 aaKnown RBP10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 CCSMST1Q4G0I0 132 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 FBXO38Q6PIJ6 1188 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 NEK10Q6ZWH5 1172 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 RAPH1Q70E73 1250 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 TDRPQ86YL5 185 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 RASGRP3Q8IV61 690 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 TRIM48Q8IWZ4 208 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 IQCKQ8N0W5 287 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 Q8N9G6 341 aaPredicted RBP10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 IFI44Q8TCB0 444 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 DLG3Q92796 817 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 ISL2Q96A47 359 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 TSPAN17Q96FV3 270 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 ZIM3Q96PE6 472 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 CDC6Q99741 560 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 HGH1Q9BTY7 390 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 TBC1D10AQ9BXI6 508 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 UNKQ9C0B0 810 aaKnown RBP10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 POPDC3Q9HBV1 291 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 POT1Q9NUX5 634 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 TOR4AQ9NXH8 423 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 CIDEBQ9UHD4 219 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 ADAMTS6Q9UKP5 1117 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 ASXL3Q9C0F0 2248 aa10.43□□□□□ -0.74
SMARCA4-213ENST00000587988 RP1P56715 2156 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms