RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 BMP1P13497 986 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 SLC2A4P14672 509 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 IDSP22304 550 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 CCND1P24385 295 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 TARSP26639 723 aaKnown RBP6.06□□□□□ -1.44
LIG3-206ENST00000586058 IGFALSP35858 605 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 GMPRP36959 345 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 RPS9P46781 194 aaKnown RBP6.06□□□□□ -1.44
LIG3-206ENST00000586058 RABIFP47224 123 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 CCR5P51681 352 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 PGGT1BP53609 377 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 YPEL5P62699 121 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 PHEXP78562 749 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 B4GALNT1Q00973 533 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 CLCQ05315 142 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 SF3A3Q12874 501 aaKnown RBP eCLIP6.06□□□□□ -1.441e-7■■■■□ 19.8
LIG3-206ENST00000586058 CDC16Q13042 620 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 IFT88Q13099 833 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 LRP8Q14114 963 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 PDCD2Q16342 344 aaPredicted RBP6.06□□□□□ -1.44
LIG3-206ENST00000586058 WSCD2Q2TBF2 565 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 TMEM259Q4ZIN3 620 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 ACSBG2Q5FVE4 666 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 ARL13AQ5H913 290 aaPredicted RBP6.06□□□□□ -1.44
LIG3-206ENST00000586058 KIAA0895LQ68EN5 471 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 NXNQ6DKJ4 435 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 TMEM207Q6UWW9 146 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 SLC36A4Q6YBV0 504 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 Q6ZS52 159 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 GPRIN3Q6ZVF9 776 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 ADGRG6Q86SQ4 1221 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 CUZD1Q86UP6 607 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 TRIM74Q86UV6 250 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 MYLK4Q86YV6 388 aaPredicted RBP6.06□□□□□ -1.44
LIG3-206ENST00000586058 DDIASQ8IXT1 998 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 CFAP206Q8IYR0 622 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 PHACTR4Q8IZ21 702 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 SLC22A15Q8IZD6 547 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 SPEM1Q8N4L4 309 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 CAMKK1Q8N5S9 505 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 ZNF781Q8N8C0 355 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 PNPLA1Q8N8W4 532 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 SNX31Q8N9S9 440 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 TP53I13Q8NBR0 393 aaPredicted RBP6.06□□□□□ -1.44
LIG3-206ENST00000586058 PJA1Q8NG27 643 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 OR2L2Q8NH16 312 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 LKAAEAR1Q8TD35 194 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 UBTD2Q8WUN7 234 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 C10orf82Q8WW14 230 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 KLK6Q92876 244 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 FAM131CQ96AQ9 280 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 VOPP1Q96AW1 172 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 ERP27Q96DN0 273 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 COX14Q96I36 57 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 LINC00615Q96LM1 132 aaPredicted RBP6.06□□□□□ -1.44
LIG3-206ENST00000586058 CCDC138Q96M89 665 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 HHIPQ96QV1 700 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 OR2M4Q96R27 311 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 SLC30A3Q99726 388 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 CCT7Q99832 543 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 MYOCQ99972 504 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 HGH1Q9BTY7 390 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 TUBB6Q9BUF5 446 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 APOOQ9BUR5 198 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 NUSAP1Q9BXS6 441 aaKnown RBP6.06□□□□□ -1.44
LIG3-206ENST00000586058 TEX101Q9BY14 249 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 PCED1AQ9H1Q7 454 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 SLC6A17Q9H1V8 727 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 TRIT1Q9H3H1 467 aaKnown RBP6.06□□□□□ -1.44
LIG3-206ENST00000586058 ACTR5Q9H9F9 607 aaPredicted RBP6.06□□□□□ -1.44
LIG3-206ENST00000586058 SEMA4BQ9NPR2 832 aaPredicted RBP6.06□□□□□ -1.44
LIG3-206ENST00000586058 TCF7L2Q9NQB0 619 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 ITM2CQ9NQX7 267 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 AASDHPPTQ9NRN7 309 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 RIC8BQ9NVN3 520 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 USP36Q9P275 1121 aaKnown RBP6.06□□□□□ -1.44
LIG3-206ENST00000586058 ATXN10Q9UBB4 475 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 KLQ9UEF7 1012 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 EIF2B4Q9UI10 523 aaKnown RBP6.06□□□□□ -1.44
LIG3-206ENST00000586058 HCN2Q9UL51 889 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 ACSL5Q9ULC5 683 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 MED16Q9Y2X0 877 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 OR1A2Q9Y585 309 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 HEBP2Q9Y5Z4 205 aa6.06□□□□□ -1.44
LIG3-206ENST00000586058 PRSS38A1L453 326 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 NEMP2A6NFY4 417 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 H0YHG0 523 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 K7EPI3 171 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 K7ESM1 405 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 CLGNO14967 610 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 AZIN1O14977 448 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 KLK8O60259 260 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 GPC4O75487 556 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 STK16O75716 305 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 POP7O75817 140 aaKnown RBP6.05□□□□□ -1.44
LIG3-206ENST00000586058 SLCO2B1O94956 709 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 WDR47O94967 919 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 TSPAN12O95859 305 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 SOD1P00441 154 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 IGLV3-19P01714 112 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms