RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 KCNJ1P48048 391 aa12.05□□□□□ -0.48
SS18-225ENST00000585121 PREPP48147 710 aa12.05□□□□□ -0.48
SS18-225ENST00000585121 PPP1CAP62136 330 aa12.05□□□□□ -0.48
SS18-225ENST00000585121 HSD11B2P80365 405 aa12.05□□□□□ -0.48
SS18-225ENST00000585121 ACVR1Q04771 509 aa12.05□□□□□ -0.48
SS18-225ENST00000585121 BRD3Q15059 726 aa12.05□□□□□ -0.48
SS18-225ENST00000585121 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.05□□□□□ -0.48
SS18-225ENST00000585121 TIPARPQ7Z3E1 657 aaKnown RBP12.05□□□□□ -0.48
SS18-225ENST00000585121 HOOK3Q86VS8 718 aa12.05□□□□□ -0.48
SS18-225ENST00000585121 EXTL1Q92935 676 aa12.05□□□□□ -0.48
SS18-225ENST00000585121 SGSM3Q96HU1 749 aa12.05□□□□□ -0.48
SS18-225ENST00000585121 SLC45A3Q96JT2 553 aa12.05□□□□□ -0.48
SS18-225ENST00000585121 CATSPER2Q96P56 530 aa12.05□□□□□ -0.48
SS18-225ENST00000585121 FCRL4Q96PJ5 515 aa12.05□□□□□ -0.48
SS18-225ENST00000585121 FANCEQ9HB96 536 aa12.05□□□□□ -0.48
SS18-225ENST00000585121 CATSPERZQ9NTU4 200 aa12.05□□□□□ -0.48
SS18-225ENST00000585121 PRSS21Q9Y6M0 314 aa12.05□□□□□ -0.48
SS18-225ENST00000585121 RPS6KL1Q9Y6S9 549 aa12.05□□□□□ -0.48
SS18-225ENST00000585121 PIEZO2Q9H5I5 2752 aa12.04□□□□□ -0.48
SS18-225ENST00000585121 SDK2Q58EX2 2172 aa12.04□□□□□ -0.48
SS18-225ENST00000585121 ATMQ13315 3056 aa12.04□□□□□ -0.48
SS18-225ENST00000585121 LOC101059948A0A1B0GTJ6 334 aa12.04□□□□□ -0.48
SS18-225ENST00000585121 PFDN6O15212 129 aa12.04□□□□□ -0.48
SS18-225ENST00000585121 FOLR1P15328 257 aa12.04□□□□□ -0.48
SS18-225ENST00000585121 WT1P19544 449 aaPredicted RBP12.04□□□□□ -0.48
SS18-225ENST00000585121 STAT5AP42229 794 aa12.04□□□□□ -0.48
SS18-225ENST00000585121 ARCN1P48444 511 aaKnown RBP12.04□□□□□ -0.48
SS18-225ENST00000585121 CYP4F2P78329 520 aa12.04□□□□□ -0.48
SS18-225ENST00000585121 PRKG2Q13237 762 aa12.04□□□□□ -0.48
SS18-225ENST00000585121 BOP1Q14137 746 aaKnown RBP12.04□□□□□ -0.48
SS18-225ENST00000585121 TBR1Q16650 682 aa12.04□□□□□ -0.48
SS18-225ENST00000585121 ZNF658BQ4V348 819 aaPredicted RBP12.04□□□□□ -0.48
SS18-225ENST00000585121 ZNF843Q8N446 348 aa12.04□□□□□ -0.48
SS18-225ENST00000585121 GALNT6Q8NCL4 622 aa12.04□□□□□ -0.48
SS18-225ENST00000585121 PHC3Q8NDX5 983 aa12.04□□□□□ -0.48
SS18-225ENST00000585121 OR8K5Q8NH50 307 aa12.04□□□□□ -0.48
SS18-225ENST00000585121 HGH1Q9BTY7 390 aa12.04□□□□□ -0.48
SS18-225ENST00000585121 SLC12A9Q9BXP2 914 aa12.04□□□□□ -0.48
SS18-225ENST00000585121 TFB2MQ9H5Q4 396 aaKnown RBP12.04□□□□□ -0.48
SS18-225ENST00000585121 CHRAC1Q9NRG0 131 aa12.04□□□□□ -0.48
SS18-225ENST00000585121 C1GALT1Q9NS00 363 aa12.04□□□□□ -0.48
SS18-225ENST00000585121 POLG2Q9UHN1 485 aa12.04□□□□□ -0.48
SS18-225ENST00000585121 ASF1AQ9Y294 204 aa12.04□□□□□ -0.48
SS18-225ENST00000585121 ZNF106Q9H2Y7 1883 aaKnown RBP12.04□□□□□ -0.48
SS18-225ENST00000585121 C2orf74A8MZ97 194 aa12.03□□□□□ -0.48
SS18-225ENST00000585121 OR1I1O60431 355 aa12.03□□□□□ -0.48
SS18-225ENST00000585121 EBLN1P0CF75 366 aa12.03□□□□□ -0.48
SS18-225ENST00000585121 TPSB2P20231 275 aa12.03□□□□□ -0.48
SS18-225ENST00000585121 TTPAP49638 278 aa12.03□□□□□ -0.48
SS18-225ENST00000585121 KPNA2P52292 529 aaKnown RBP12.03□□□□□ -0.48
SS18-225ENST00000585121 TUBB4BP68371 445 aa12.03□□□□□ -0.48
SS18-225ENST00000585121 TUBB2AQ13885 445 aa12.03□□□□□ -0.48
SS18-225ENST00000585121 KCNAB1Q14722 419 aa12.03□□□□□ -0.48
SS18-225ENST00000585121 TPSAB1Q15661 275 aa12.03□□□□□ -0.48
SS18-225ENST00000585121 LRRC8BQ6P9F7 803 aa12.03□□□□□ -0.48
SS18-225ENST00000585121 BORAQ6PGQ7 559 aa12.03□□□□□ -0.48
SS18-225ENST00000585121 MICALCLQ6ZW33 695 aa12.03□□□□□ -0.48
SS18-225ENST00000585121 ZNF605Q86T29 641 aa12.03□□□□□ -0.48
SS18-225ENST00000585121 AMIGO1Q86WK6 493 aa12.03□□□□□ -0.48
SS18-225ENST00000585121 TBC1D21Q8IYX1 336 aa12.03□□□□□ -0.48
SS18-225ENST00000585121 UNC5BQ8IZJ1 945 aa12.03□□□□□ -0.48
SS18-225ENST00000585121 D2HGDHQ8N465 521 aa12.03□□□□□ -0.48
SS18-225ENST00000585121 OTUD6BQ8N6M0 293 aa12.03□□□□□ -0.48
SS18-225ENST00000585121 PRELID2Q8N945 189 aa12.03□□□□□ -0.48
SS18-225ENST00000585121 OR52E1Q8NGJ3 308 aa12.03□□□□□ -0.48
SS18-225ENST00000585121 GSDMBQ8TAX9 411 aa12.03□□□□□ -0.48
SS18-225ENST00000585121 MAGOHBQ96A72 148 aaKnown RBP12.03□□□□□ -0.48
SS18-225ENST00000585121 ZNF778Q96MU6 729 aa12.03□□□□□ -0.48
SS18-225ENST00000585121 TUBB2BQ9BVA1 445 aa12.03□□□□□ -0.48
SS18-225ENST00000585121 FGF21Q9NSA1 209 aa12.03□□□□□ -0.48
SS18-225ENST00000585121 KCND1Q9NSA2 647 aa12.03□□□□□ -0.48
SS18-225ENST00000585121 KCND3Q9UK17 655 aa12.03□□□□□ -0.48
SS18-225ENST00000585121 POMT2Q9UKY4 750 aa12.03□□□□□ -0.48
SS18-225ENST00000585121 PADI1Q9ULC6 663 aa12.03□□□□□ -0.48
SS18-225ENST00000585121 PCDHB3Q9Y5E6 796 aa12.03□□□□□ -0.48
SS18-225ENST00000585121 PRMT5O14744 637 aaPredicted RBP12.02□□□□□ -0.48
SS18-225ENST00000585121 CD3EAPO15446 510 aaKnown RBP12.02□□□□□ -0.48
SS18-225ENST00000585121 KIF5CO60282 957 aa12.02□□□□□ -0.48
SS18-225ENST00000585121 NDUFS3O75489 264 aa12.02□□□□□ -0.48
SS18-225ENST00000585121 C1QL1O75973 258 aa12.02□□□□□ -0.48
SS18-225ENST00000585121 RPN2P04844 631 aa12.02□□□□□ -0.48
SS18-225ENST00000585121 ZNF28P17035 718 aa12.02□□□□□ -0.48
SS18-225ENST00000585121 TCN2P20062 427 aa12.02□□□□□ -0.48
SS18-225ENST00000585121 DLSTP36957 453 aa12.02□□□□□ -0.48
SS18-225ENST00000585121 GPS1Q13098 491 aa12.02□□□□□ -0.48
SS18-225ENST00000585121 TMED2Q15363 201 aa12.02□□□□□ -0.48
SS18-225ENST00000585121 TRIP13Q15645 432 aaPredicted RBP12.02□□□□□ -0.48
SS18-225ENST00000585121 PTRHD1Q6GMV3 140 aaKnown RBP12.02□□□□□ -0.48
SS18-225ENST00000585121 ZNF534Q76KX8 674 aa12.02□□□□□ -0.48
SS18-225ENST00000585121 SDCCAG8Q86SQ7 713 aaPredicted RBP12.02□□□□□ -0.48
SS18-225ENST00000585121 MPP5Q8N3R9 675 aa12.02□□□□□ -0.48
SS18-225ENST00000585121 RASGEF1CQ8N431 466 aa12.02□□□□□ -0.48
SS18-225ENST00000585121 ASZ1Q8WWH4 475 aa12.02□□□□□ -0.48
SS18-225ENST00000585121 CARD6Q9BX69 1037 aa12.02□□□□□ -0.48
SS18-225ENST00000585121 MRM3Q9HC36 420 aaKnown RBP12.02□□□□□ -0.48
SS18-225ENST00000585121 SYTL2Q9HCH5 934 aa12.02□□□□□ -0.48
SS18-225ENST00000585121 TTC7AQ9ULT0 858 aaPredicted RBP12.02□□□□□ -0.48
SS18-225ENST00000585121 BTRCQ9Y297 605 aa12.02□□□□□ -0.48
SS18-225ENST00000585121 TDRKHQ9Y2W6 561 aaKnown RBP12.02□□□□□ -0.48
SS18-225ENST00000585121 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.02□□□□□ -0.484e-6■■■□□ 17.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms