RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	HTRA2	O43464	458 aa	Predicted RBP	11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	ALDOC	P09972	364 aa	Known RBP	11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	ATF4	P18848	351 aa	Predicted RBP	11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	TAGLN2	P37802	199 aa	Known RBP	11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	NR1H2	P55055	460 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	CDKN2D	P55273	166 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	PRKCQ	Q04759	706 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	EFEMP1	Q12805	493 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	HERC3	Q15034	1050 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	ZIK1	Q3SY52	487 aa	Predicted RBP	11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	C6orf10	Q5SRN2	563 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	DCP1B	Q8IZD4	617 aa	Known RBP	11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	EFHB	Q8N7U6	833 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	PRR7	Q8TB68	274 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	ASB9	Q96DX5	294 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	CYP2S1	Q96SQ9	504 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	SEPHS2	Q99611	448 aa		11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	NYNRIN	Q9P2P1	1898 aa	Known RBP	11.43	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	PITPNM1	O00562	1244 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	CRYZL1	O95825	349 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	GALT	P07902	379 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	HOXB1	P14653	301 aa	Predicted RBP	11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	KEL	P23276	732 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	NOS3	P29474	1203 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	ADRA1A	P35348	466 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	HNMT	P50135	292 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	SLC26A5	P58743	744 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	PPP1R8	Q12972	351 aa	Known RBP	11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	PTPRR	Q15256	657 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	PSMD5	Q16401	504 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	SPATS1	Q496A3	300 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	CYHR1	Q6ZMK1	362 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	RNF19B	Q6ZMZ0	732 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	CPSF7	Q8N684	471 aa	Known RBP	11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	AUTS2	Q8WXX7	1259 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	RMND5B	Q96G75	393 aa	Predicted RBP	11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	HAUS8	Q9BT25	410 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	HGH1	Q9BTY7	390 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	BBS2	Q9BXC9	721 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	CRISPLD1	Q9H336	500 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	ZNF696	Q9H7X3	374 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	RSL24D1	Q9UHA3	163 aa	Known RBP	11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	IPO11	Q9UI26	975 aa	Known RBP	11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	OGDHL	Q9ULD0	1010 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	FAF1	Q9UNN5	650 aa	Predicted RBP	11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	DOLK	Q9UPQ8	538 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	TRAF6	Q9Y4K3	522 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	CCDC162P	A2VCL2	907 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	ANKRD34B	A5PLL1	514 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	ZSCAN5B	A6NJL1	495 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	ZBBX	A8MT70	800 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	ADAM12	O43184	909 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	AP1G1	O43747	822 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	IGLV3-25	P01717	112 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	SNRPB2	P08579	225 aa	Known RBP	11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	PIM1	P11309	404 aa	Predicted RBP	11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	JAK1	P23458	1154 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	OR1D2	P34982	312 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	ARL1	P40616	181 aa	Predicted RBP	11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	NFKB2	Q00653	900 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	APOF	Q13790	326 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	NEDD8	Q15843	81 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	NDUFA5	Q16718	116 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	RABL3	Q5HYI8	236 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	TBCEL	Q5QJ74	424 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	KLHL35	Q6PF15	583 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	ZNF574	Q6ZN55	896 aa	Predicted RBP	11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	DHFR2	Q86XF0	187 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	FUNDC1	Q8IVP5	155 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	CARF	Q8N187	725 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	PSMG2	Q969U7	264 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	IL12RB2	Q99665	862 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	CCDC28B	Q9BUN5	200 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	LTB4R2	Q9NPC1	389 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	SPAG4	Q9NPE6	437 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	SMOX	Q9NWM0	555 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	SLAMF8	Q9P0V8	285 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	FAM8A1	Q9UBU6	413 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	CHTOP	Q9Y3Y2	248 aa	Known RBP	11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	PCDHB5	Q9Y5E4	795 aa		11.42	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063		A0A1B0GWJ7	208 aa		11.41	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	MATN3	O15232	486 aa		11.41	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	NRP2	O60462	931 aa		11.41	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	GPR37L1	O60883	481 aa		11.41	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	CLN5	O75503	358 aa		11.41	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	SRP72	O76094	671 aa	Known RBP	11.41	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	IPO13	O94829	963 aa	Known RBP	11.41	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	H6PD	O95479	791 aa		11.41	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	F9	P00740	461 aa		11.41	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	TYMP	P19971	482 aa		11.41	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	ATP5F1	P24539	256 aa	Predicted RBP	11.41	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	RHD	Q02161	417 aa		11.41	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	PFKFB4	Q16877	469 aa		11.41	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	TTC33	Q6PID6	262 aa	Predicted RBP	11.41	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	FIBCD1	Q8N539	461 aa		11.41	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	HDAC10	Q969S8	669 aa		11.41	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	RMDN1	Q96DB5	314 aa		11.41	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	ZFR	Q96KR1	1074 aa	Known RBP	11.41	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	TMEM74	Q96NL1	305 aa		11.41	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	FCRL5	Q96RD9	977 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms