RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 IGDCC3Q8IVU1 814 aa24.28■■□□□ 1.48
TSEN54-209ENST00000583454 KIF18AQ8NI77 898 aa24.28■■□□□ 1.48
TSEN54-209ENST00000583454 PWWP2AQ96N64 755 aa24.28■■□□□ 1.48
TSEN54-209ENST00000583454 SLC38A3Q99624 504 aa24.28■■□□□ 1.48
TSEN54-209ENST00000583454 P2RY12Q9H244 342 aa24.28■■□□□ 1.48
TSEN54-209ENST00000583454 COG4Q9H9E3 785 aa24.28■■□□□ 1.48
TSEN54-209ENST00000583454 SLC40A1Q9NP59 571 aa24.28■■□□□ 1.48
TSEN54-209ENST00000583454 WDR70Q9NW82 654 aa24.28■■□□□ 1.48
TSEN54-209ENST00000583454 TMEM9Q9P0T7 183 aa24.28■■□□□ 1.48
TSEN54-209ENST00000583454 PSMD13Q9UNM6 376 aa24.28■■□□□ 1.48
TSEN54-209ENST00000583454 PCDHGA4Q9Y5G9 962 aa24.28■■□□□ 1.48
TSEN54-209ENST00000583454 FAM169AQ9Y6X4 670 aa24.28■■□□□ 1.48
TSEN54-209ENST00000583454 F8W8V4 182 aa24.27■■□□□ 1.48
TSEN54-209ENST00000583454 J3QKU1 62 aa24.27■■□□□ 1.48
TSEN54-209ENST00000583454 PRMT5O14744 637 aaPredicted RBP24.27■■□□□ 1.48
TSEN54-209ENST00000583454 VIPP01282 170 aa24.27■■□□□ 1.48
TSEN54-209ENST00000583454 FTH1P02794 183 aa24.27■■□□□ 1.48
TSEN54-209ENST00000583454 THRAP10827 490 aa24.27■■□□□ 1.48
TSEN54-209ENST00000583454 CD82P27701 267 aa24.27■■□□□ 1.48
TSEN54-209ENST00000583454 RPA4Q13156 261 aa24.27■■□□□ 1.48
TSEN54-209ENST00000583454 HIF1AQ16665 826 aa24.27■■□□□ 1.48
TSEN54-209ENST00000583454 BBS9Q3SYG4 887 aa24.27■■□□□ 1.48
TSEN54-209ENST00000583454 CAPRIN2Q6IMN6 1127 aaKnown RBP24.27■■□□□ 1.48
TSEN54-209ENST00000583454 ZNF761Q86XN6 746 aaPredicted RBP24.27■■□□□ 1.48
TSEN54-209ENST00000583454 RBM12BQ8IXT5 1001 aaKnown RBP24.27■■□□□ 1.48
TSEN54-209ENST00000583454 OR4D9Q8NGE8 314 aa24.27■■□□□ 1.48
TSEN54-209ENST00000583454 LRRC39Q96DD0 335 aa24.27■■□□□ 1.48
TSEN54-209ENST00000583454 LDHAL6BQ9BYZ2 381 aaPredicted RBP24.27■■□□□ 1.48
TSEN54-209ENST00000583454 WWP1Q9H0M0 922 aa24.27■■□□□ 1.48
TSEN54-209ENST00000583454 POT1Q9NUX5 634 aa24.27■■□□□ 1.48
TSEN54-209ENST00000583454 KCNK4Q9NYG8 393 aa24.27■■□□□ 1.48
TSEN54-209ENST00000583454 FAM8A1Q9UBU6 413 aa24.27■■□□□ 1.48
TSEN54-209ENST00000583454 PCDHGA3Q9Y5H0 932 aa24.27■■□□□ 1.48
TSEN54-209ENST00000583454 LILRA5A6NI73 299 aa24.26■■□□□ 1.47
TSEN54-209ENST00000583454 NDUFS3O75489 264 aa24.26■■□□□ 1.47
TSEN54-209ENST00000583454 TTC4O95801 387 aa24.26■■□□□ 1.47
TSEN54-209ENST00000583454 OGNP20774 298 aaKnown RBP24.26■■□□□ 1.47
TSEN54-209ENST00000583454 RPS3P23396 243 aaKnown RBP eCLIP24.26■■□□□ 1.47
TSEN54-209ENST00000583454 EPHA4P54764 986 aa24.26■■□□□ 1.47
TSEN54-209ENST00000583454 ARL4CP56559 192 aa24.26■■□□□ 1.47
TSEN54-209ENST00000583454 GPLD1P80108 840 aa24.26■■□□□ 1.47
TSEN54-209ENST00000583454 LONRF1Q17RB8 773 aa24.26■■□□□ 1.47
TSEN54-209ENST00000583454 TMEM26Q6ZUK4 368 aa24.26■■□□□ 1.47
TSEN54-209ENST00000583454 LRRC6Q86X45 466 aa24.26■■□□□ 1.47
TSEN54-209ENST00000583454 TRIM48Q8IWZ4 208 aa24.26■■□□□ 1.47
TSEN54-209ENST00000583454 CXorf40BQ96DE9 158 aa24.26■■□□□ 1.47
TSEN54-209ENST00000583454 RMDN2Q96LZ7 410 aa24.26■■□□□ 1.47
TSEN54-209ENST00000583454 INSM2Q96T92 566 aaPredicted RBP24.26■■□□□ 1.47
TSEN54-209ENST00000583454 CARD6Q9BX69 1037 aa24.26■■□□□ 1.47
TSEN54-209ENST00000583454 OR52A5Q9H2C5 316 aa24.26■■□□□ 1.47
TSEN54-209ENST00000583454 DPH5Q9H2P9 285 aa24.26■■□□□ 1.47
TSEN54-209ENST00000583454 TEX264Q9Y6I9 313 aa24.26■■□□□ 1.47
TSEN54-209ENST00000583454 LIN7AO14910 233 aaPredicted RBP24.25■■□□□ 1.47
TSEN54-209ENST00000583454 TRA2AQ13595 282 aaKnown RBP eCLIP24.25■■□□□ 1.47
TSEN54-209ENST00000583454 CRYMQ14894 314 aa24.25■■□□□ 1.47
TSEN54-209ENST00000583454 MANEAQ5SRI9 462 aa24.25■■□□□ 1.47
TSEN54-209ENST00000583454 RNF187Q5TA31 235 aaPredicted RBP24.25■■□□□ 1.47
TSEN54-209ENST00000583454 CILP2Q8IUL8 1156 aa24.25■■□□□ 1.47
TSEN54-209ENST00000583454 LMNTD2Q8IXW0 634 aa24.25■■□□□ 1.47
TSEN54-209ENST00000583454 OTUD6BQ8N6M0 293 aa24.25■■□□□ 1.47
TSEN54-209ENST00000583454 SERBP1Q8NC51 408 aaKnown RBP eCLIP24.25■■□□□ 1.47
TSEN54-209ENST00000583454 SPDYE1Q8NFV5 336 aaPredicted RBP24.25■■□□□ 1.47
TSEN54-209ENST00000583454 LPGAT1Q92604 370 aa24.25■■□□□ 1.47
TSEN54-209ENST00000583454 EXTL1Q92935 676 aa24.25■■□□□ 1.47
TSEN54-209ENST00000583454 WDR83Q9BRX9 315 aaKnown RBP24.25■■□□□ 1.47
TSEN54-209ENST00000583454 PLAC1Q9HBJ0 212 aa24.25■■□□□ 1.47
TSEN54-209ENST00000583454 GRHL1Q9NZI5 618 aa24.25■■□□□ 1.47
TSEN54-209ENST00000583454 IL1RAPL1Q9NZN1 696 aa24.25■■□□□ 1.47
TSEN54-209ENST00000583454 PDP2Q9P2J9 529 aa24.25■■□□□ 1.47
TSEN54-209ENST00000583454 UTP11Q9Y3A2 253 aaKnown RBP24.25■■□□□ 1.47
TSEN54-209ENST00000583454 FLNCQ14315 2725 aa24.25■■□□□ 1.47
TSEN54-209ENST00000583454 E7ESA3 106 aa24.24■■□□□ 1.47
TSEN54-209ENST00000583454 PFDN6O15212 129 aa24.24■■□□□ 1.47
TSEN54-209ENST00000583454 ITGB2P05107 769 aa24.24■■□□□ 1.47
TSEN54-209ENST00000583454 SLC35G4P0C7Q5 338 aa24.24■■□□□ 1.47
TSEN54-209ENST00000583454 MTHFD1P11586 935 aaKnown RBP24.24■■□□□ 1.47
TSEN54-209ENST00000583454 MPSTP25325 297 aa24.24■■□□□ 1.47
TSEN54-209ENST00000583454 ELK3P41970 407 aa24.24■■□□□ 1.47
TSEN54-209ENST00000583454 CD151P48509 253 aa24.24■■□□□ 1.47
TSEN54-209ENST00000583454 ADARP55265 1226 aaKnown RBP24.24■■□□□ 1.47
TSEN54-209ENST00000583454 CALCOCO2Q13137 446 aa24.24■■□□□ 1.47
TSEN54-209ENST00000583454 THOC5Q13769 683 aaKnown RBP24.24■■□□□ 1.47
TSEN54-209ENST00000583454 SPANXN3Q5MJ09 141 aa24.24■■□□□ 1.47
TSEN54-209ENST00000583454 CENPUQ71F23 418 aa24.24■■□□□ 1.47
TSEN54-209ENST00000583454 ELMO1Q92556 727 aa24.24■■□□□ 1.47
TSEN54-209ENST00000583454 TAAR9Q96RI9 348 aa24.24■■□□□ 1.47
TSEN54-209ENST00000583454 RAB17Q9H0T7 212 aa24.24■■□□□ 1.47
TSEN54-209ENST00000583454 EPB41L1Q9H4G0 881 aa24.24■■□□□ 1.47
TSEN54-209ENST00000583454 C20orf96Q9NUD7 363 aaPredicted RBP24.24■■□□□ 1.47
TSEN54-209ENST00000583454 AKAP7Q9P0M2 348 aaPredicted RBP24.24■■□□□ 1.47
TSEN54-209ENST00000583454 SLC5A10A0PJK1 596 aa24.23■■□□□ 1.47
TSEN54-209ENST00000583454 S1PR4O95977 384 aa24.23■■□□□ 1.47
TSEN54-209ENST00000583454 PDHA2P29803 388 aa24.23■■□□□ 1.47
TSEN54-209ENST00000583454 PLOD1Q02809 727 aaPredicted RBP24.23■■□□□ 1.47
TSEN54-209ENST00000583454 ZNF449Q6P9G9 518 aa24.23■■□□□ 1.47
TSEN54-209ENST00000583454 UNC5BQ8IZJ1 945 aa24.23■■□□□ 1.47
TSEN54-209ENST00000583454 MMGT1Q8N4V1 131 aa24.23■■□□□ 1.47
TSEN54-209ENST00000583454 BMPERQ8N8U9 685 aa24.23■■□□□ 1.47
TSEN54-209ENST00000583454 MNS1Q8NEH6 495 aa24.23■■□□□ 1.47
TSEN54-209ENST00000583454 OR10G6Q8NH81 332 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms