RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 ACAP2Q15057 778 aa16■□□□□ 0.15
CDK5RAP3-228ENST00000583363 TSNAXIP1Q2TAA8 658 aa16■□□□□ 0.15
CDK5RAP3-228ENST00000583363 SYTL3Q4VX76 610 aa16■□□□□ 0.15
CDK5RAP3-228ENST00000583363 PRAMEF14Q5SWL7 426 aa16■□□□□ 0.15
CDK5RAP3-228ENST00000583363 LRRC8EQ6NSJ5 796 aa16■□□□□ 0.15
CDK5RAP3-228ENST00000583363 C16orf46Q6P387 395 aa16■□□□□ 0.15
CDK5RAP3-228ENST00000583363 PIWIL4Q7Z3Z4 852 aaKnown RBP16■□□□□ 0.15
CDK5RAP3-228ENST00000583363 RABEPKQ7Z6M1 372 aa16■□□□□ 0.15
CDK5RAP3-228ENST00000583363 CCL4L1Q8NHW4 92 aa16■□□□□ 0.15
CDK5RAP3-228ENST00000583363 TCP10LQ8TDR4 215 aa16■□□□□ 0.15
CDK5RAP3-228ENST00000583363 TSNARE1Q96NA8 513 aa16■□□□□ 0.15
CDK5RAP3-228ENST00000583363 UNKQ9C0B0 810 aaKnown RBP16■□□□□ 0.15
CDK5RAP3-228ENST00000583363 OR52A5Q9H2C5 316 aa16■□□□□ 0.15
CDK5RAP3-228ENST00000583363 SMOC1Q9H4F8 434 aa16■□□□□ 0.15
CDK5RAP3-228ENST00000583363 TFB2MQ9H5Q4 396 aaKnown RBP16■□□□□ 0.15
CDK5RAP3-228ENST00000583363 IKZF3Q9UKT9 509 aa16■□□□□ 0.15
CDK5RAP3-228ENST00000583363 SNX11Q9Y5W9 270 aa16■□□□□ 0.15
CDK5RAP3-228ENST00000583363 H3BM21 787 aa15.99■□□□□ 0.15
CDK5RAP3-228ENST00000583363 ZBTB14O43829 449 aa15.99■□□□□ 0.15
CDK5RAP3-228ENST00000583363 MATN4O95460 622 aa15.99■□□□□ 0.15
CDK5RAP3-228ENST00000583363 CTSEP14091 401 aa15.99■□□□□ 0.15
CDK5RAP3-228ENST00000583363 IDSP22304 550 aa15.99■□□□□ 0.15
CDK5RAP3-228ENST00000583363 AK4P27144 223 aaPredicted RBP15.99■□□□□ 0.15
CDK5RAP3-228ENST00000583363 ACADLP28330 430 aa15.99■□□□□ 0.15
CDK5RAP3-228ENST00000583363 RPA3P35244 121 aaPredicted RBP15.99■□□□□ 0.15
CDK5RAP3-228ENST00000583363 RXRGP48443 463 aa15.99■□□□□ 0.15
CDK5RAP3-228ENST00000583363 ABRQ12979 859 aa15.99■□□□□ 0.15
CDK5RAP3-228ENST00000583363 PLA2G2CQ5R387 149 aa15.99■□□□□ 0.15
CDK5RAP3-228ENST00000583363 CAPRIN2Q6IMN6 1127 aaKnown RBP15.99■□□□□ 0.15
CDK5RAP3-228ENST00000583363 KLC3Q6P597 504 aa15.99■□□□□ 0.15
CDK5RAP3-228ENST00000583363 WASH2PQ6VEQ5 465 aa15.99■□□□□ 0.15
CDK5RAP3-228ENST00000583363 RASGRP3Q8IV61 690 aa15.99■□□□□ 0.15
CDK5RAP3-228ENST00000583363 MYO1HQ8N1T3 1032 aa15.99■□□□□ 0.15
CDK5RAP3-228ENST00000583363 TMEM151AQ8N4L1 468 aa15.99■□□□□ 0.15
CDK5RAP3-228ENST00000583363 DENND1AQ8TEH3 1009 aa15.99■□□□□ 0.15
CDK5RAP3-228ENST00000583363 KIAA1191Q96A73 305 aa15.99■□□□□ 0.15
CDK5RAP3-228ENST00000583363 PTERQ96BW5 349 aa15.99■□□□□ 0.15
CDK5RAP3-228ENST00000583363 GSDMCQ9BYG8 508 aa15.99■□□□□ 0.15
CDK5RAP3-228ENST00000583363 C12orf65Q9H3J6 166 aaKnown RBP15.99■□□□□ 0.15
CDK5RAP3-228ENST00000583363 CAPN10Q9HC96 672 aa15.99■□□□□ 0.15
CDK5RAP3-228ENST00000583363 WASH6PQ9NQA3 447 aa15.99■□□□□ 0.15
CDK5RAP3-228ENST00000583363 ANGPTL2Q9UKU9 493 aa15.99■□□□□ 0.15
CDK5RAP3-228ENST00000583363 EMCNQ9ULC0 261 aa15.99■□□□□ 0.15
CDK5RAP3-228ENST00000583363 PCDHGA5Q9Y5G8 931 aa15.99■□□□□ 0.15
CDK5RAP3-228ENST00000583363 CHD6Q8TD26 2715 aa15.99■□□□□ 0.15
CDK5RAP3-228ENST00000583363 PI4KAP42356 2102 aa15.98■□□□□ 0.15
CDK5RAP3-228ENST00000583363 LRP4O75096 1905 aa15.98■□□□□ 0.15
CDK5RAP3-228ENST00000583363 CCDC189A1A4V9 331 aa15.98■□□□□ 0.15
CDK5RAP3-228ENST00000583363 GFYI3L273 518 aa15.98■□□□□ 0.15
CDK5RAP3-228ENST00000583363 CDC7O00311 574 aa15.98■□□□□ 0.15
CDK5RAP3-228ENST00000583363 RBP1P09455 135 aa15.98■□□□□ 0.15
CDK5RAP3-228ENST00000583363 GLRBP48167 497 aa15.98■□□□□ 0.15
CDK5RAP3-228ENST00000583363 KCNC1P48547 511 aa15.98■□□□□ 0.15
CDK5RAP3-228ENST00000583363 HNRNPKP61978 463 aaKnown RBP eCLIP15.98■□□□□ 0.15
CDK5RAP3-228ENST00000583363 PPP2R2AP63151 447 aa15.98■□□□□ 0.15
CDK5RAP3-228ENST00000583363 ILF3Q12906 894 aaKnown RBP eCLIP15.98■□□□□ 0.15
CDK5RAP3-228ENST00000583363 STPG1Q5TH74 334 aa15.98■□□□□ 0.15
CDK5RAP3-228ENST00000583363 SLC23A3Q6PIS1 610 aa15.98■□□□□ 0.15
CDK5RAP3-228ENST00000583363 LVRNQ6Q4G3 990 aa15.98■□□□□ 0.15
CDK5RAP3-228ENST00000583363 ABRAXAS1Q6UWZ7 409 aa15.98■□□□□ 0.15
CDK5RAP3-228ENST00000583363 FSTL5Q8N475 847 aaPredicted RBP15.98■□□□□ 0.15
CDK5RAP3-228ENST00000583363 ASB11Q8WXH4 323 aa15.98■□□□□ 0.15
CDK5RAP3-228ENST00000583363 SCYL1Q96KG9 808 aa15.98■□□□□ 0.15
CDK5RAP3-228ENST00000583363 MRPL57Q9BQC6 102 aaKnown RBP15.98■□□□□ 0.15
CDK5RAP3-228ENST00000583363 ZDHHC5Q9C0B5 715 aa15.98■□□□□ 0.15
CDK5RAP3-228ENST00000583363 PRDM8Q9NQV8 689 aa15.98■□□□□ 0.15
CDK5RAP3-228ENST00000583363 SPASTQ9UBP0 616 aa15.98■□□□□ 0.15
CDK5RAP3-228ENST00000583363 APOBEC3BQ9UH17 382 aaKnown RBP15.98■□□□□ 0.15
CDK5RAP3-228ENST00000583363 TSR3Q9UJK0 312 aaKnown RBP15.98■□□□□ 0.15
CDK5RAP3-228ENST00000583363 PCOLCE2Q9UKZ9 415 aa15.98■□□□□ 0.15
CDK5RAP3-228ENST00000583363 SLC6A14Q9UN76 642 aa15.98■□□□□ 0.15
CDK5RAP3-228ENST00000583363 WDR37Q9Y2I8 494 aa15.98■□□□□ 0.15
CDK5RAP3-228ENST00000583363 FRYQ5TBA9 3013 aa15.98■□□□□ 0.15
CDK5RAP3-228ENST00000583363 TMEM120BA0PK00 339 aa15.97■□□□□ 0.15
CDK5RAP3-228ENST00000583363 TARM1B6A8C7 271 aa15.97■□□□□ 0.15
CDK5RAP3-228ENST00000583363 TM9SF1O15321 606 aa15.97■□□□□ 0.15
CDK5RAP3-228ENST00000583363 SLC16A5O15375 505 aa15.97■□□□□ 0.15
CDK5RAP3-228ENST00000583363 PLIN3O60664 434 aa15.97■□□□□ 0.15
CDK5RAP3-228ENST00000583363 CELA2BP08218 269 aaPredicted RBP15.97■□□□□ 0.15
CDK5RAP3-228ENST00000583363 SBK3P0C264 359 aa15.97■□□□□ 0.15
CDK5RAP3-228ENST00000583363 TFEBP19484 476 aa15.97■□□□□ 0.15
CDK5RAP3-228ENST00000583363 RPL10P27635 214 aaKnown RBP15.97■□□□□ 0.15
CDK5RAP3-228ENST00000583363 HPDP32754 393 aaPredicted RBP15.97■□□□□ 0.15
CDK5RAP3-228ENST00000583363 ACTR1BP42025 376 aa15.97■□□□□ 0.15
CDK5RAP3-228ENST00000583363 KPNA2P52292 529 aaKnown RBP15.97■□□□□ 0.15
CDK5RAP3-228ENST00000583363 ACTR1AP61163 376 aa15.97■□□□□ 0.15
CDK5RAP3-228ENST00000583363 C1orf61Q13536 156 aa15.97■□□□□ 0.15
CDK5RAP3-228ENST00000583363 OR4D1Q15615 310 aa15.97■□□□□ 0.15
CDK5RAP3-228ENST00000583363 ZNF423Q2M1K9 1284 aa15.97■□□□□ 0.15
CDK5RAP3-228ENST00000583363 CCDC153Q494R4 210 aa15.97■□□□□ 0.15
CDK5RAP3-228ENST00000583363 PRRT3Q5FWE3 981 aa15.97■□□□□ 0.15
CDK5RAP3-228ENST00000583363 TECRLQ5HYJ1 363 aa15.97■□□□□ 0.15
CDK5RAP3-228ENST00000583363 RHEBL1Q8TAI7 183 aa15.97■□□□□ 0.15
CDK5RAP3-228ENST00000583363 STAG3L4Q8TBR4 150 aa15.97■□□□□ 0.15
CDK5RAP3-228ENST00000583363 ELF4Q99607 663 aaPredicted RBP15.97■□□□□ 0.15
CDK5RAP3-228ENST00000583363 LRRC61Q9BV99 259 aa15.97■□□□□ 0.15
CDK5RAP3-228ENST00000583363 IQCGQ9H095 443 aaKnown RBP15.97■□□□□ 0.15
CDK5RAP3-228ENST00000583363 WWP1Q9H0M0 922 aa15.97■□□□□ 0.15
CDK5RAP3-228ENST00000583363 OSGEPL1Q9H4B0 414 aa15.97■□□□□ 0.15
CDK5RAP3-228ENST00000583363 ALG9Q9H6U8 611 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms