RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 ANKRD20A2Q5SQ80 823 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 ANKRD20A1Q5TYW2 823 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 ANKRD20A3Q5VUR7 823 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 PDPK2PQ6A1A2 396 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 TCTN3Q6NUS6 607 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 CYB5D1Q6P9G0 228 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 CLEC18BQ6UXF7 455 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 PRSS42Q7Z5A4 293 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 ADGRG6Q86SQ4 1221 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 CAND1Q86VP6 1230 aaKnown RBP9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 IGDCC3Q8IVU1 814 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 RBM12BQ8IXT5 1001 aaKnown RBP9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 AGGF1Q8N302 714 aaeCLIP9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 TAB3Q8N5C8 712 aaPredicted RBP9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 TEX19Q8NA77 164 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 CLEC18CQ8NCF0 446 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 GPR26Q8NDV2 337 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 GLYATL1Q969I3 302 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 RNF31Q96EP0 1072 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 ELMO2Q96JJ3 720 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 TTC25Q96NG3 672 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 SERPINB12Q96P63 405 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 OR6C1Q96RD1 312 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 TIMM29Q9BSF4 260 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 ZNF624Q9P2J8 865 aaPredicted RBP9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 NFKBIL1Q9UBC1 381 aaPredicted RBP9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 KCND3Q9UK17 655 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 NOVA2Q9UNW9 492 aaKnown RBP9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 DNAJC16Q9Y2G8 782 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 SLC30A1Q9Y6M5 507 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 DOPEY2Q9Y3R5 2298 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 ZNF106Q9H2Y7 1883 aaKnown RBP9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 TLDC2A0PJX2 215 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 CDC14CA4D256 554 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 GOLGA6L10A6NI86 522 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 E7EVH7 732 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 KCNK1O00180 336 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 PPP1R12AO14974 1030 aaPredicted RBP9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 MTSS1O43312 755 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 VEGFDO43915 354 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 BANF1O75531 89 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 RFPL1O75677 317 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 SLC4A1P02730 911 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 MT-ND3P03897 115 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 FGF5P12034 268 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 TPSB2P20231 275 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 NR1D1P20393 614 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 IDSP22304 550 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 MAGEA3P43357 314 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 CAPZBP47756 277 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 SH3BP2P78314 561 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 BASP1P80723 227 aaKnown RBP9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 AP1B1Q10567 949 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 ZBTB17Q13105 803 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 DNASE1L3Q13609 305 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 TPSAB1Q15661 275 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 HP1BP3Q5SSJ5 553 aaPredicted RBP9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 CACHD1Q5VU97 1274 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 ABRAXAS1Q6UWZ7 409 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 ASB18Q6ZVZ8 466 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 PPP1R3BQ86XI6 285 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 TDRPQ86YL5 185 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 KLHDC8BQ8IXV7 354 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 PDIK1LQ8N165 341 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 ZNF567Q8N184 647 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 RSC1A1Q92681 617 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 MIB2Q96AX9 1013 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 EID2BQ96D98 161 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 CXorf40BQ96DE9 158 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 ZDHHC12Q96GR4 267 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 CCDC77Q9BR77 488 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 GPR63Q9BZJ6 419 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 TWSG1Q9GZX9 223 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 MAGEE1Q9HCI5 957 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 EURLQ9NYK6 297 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 SLC23A2Q9UGH3 650 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 LNPEPQ9UIQ6 1025 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 PADI1Q9ULC6 663 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 MAN2B2Q9Y2E5 1009 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 ZNF711Q9Y462 761 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 TEX264Q9Y6I9 313 aa9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 TLN1Q9Y490 2541 aaKnown RBP9.51□□□□□ -0.89
CDK5RAP3-227ENST00000583352 A0A087WUV0 522 aaPredicted RBP9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 PIPSLA2A3N6 862 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 RGS16O15492 202 aaPredicted RBP9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 KIF1CO43896 1103 aaKnown RBP9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 MTX2O75431 263 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 SPAG6O75602 509 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 CREG1O75629 220 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 CDK14O94921 469 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 RECKO95980 971 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 AGTP01019 485 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 PIRTP0C851 137 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 VCLP18206 1134 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 PTPN3P26045 913 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 RPL10P27635 214 aaKnown RBP9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 GCAP28676 217 aa9.5□□□□□ -0.89
CDK5RAP3-227ENST00000583352 CD68P34810 354 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms