RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	GALNT13	Q8IUC8	556 aa		4.69	□□□□□ -1.66
MSI2-216	ENST00000582772	GTPBP3	Q969Y2	492 aa	Known RBP	4.69	□□□□□ -1.66
MSI2-216	ENST00000582772	SAAL1	Q96ER3	474 aa		4.69	□□□□□ -1.66
MSI2-216	ENST00000582772	NPAS2	Q99743	824 aa		4.69	□□□□□ -1.66
MSI2-216	ENST00000582772	GATA5	Q9BWX5	397 aa	Predicted RBP	4.69	□□□□□ -1.66
MSI2-216	ENST00000582772	TLR10	Q9BXR5	811 aa		4.69	□□□□□ -1.66
MSI2-216	ENST00000582772	KRTAP4-5	Q9BYR2	181 aa		4.69	□□□□□ -1.66
MSI2-216	ENST00000582772	SLC7A5P2	Q9GIP4	190 aa		4.69	□□□□□ -1.66
MSI2-216	ENST00000582772	CATSPERB	Q9H7T0	1116 aa		4.69	□□□□□ -1.66
MSI2-216	ENST00000582772	SP110	Q9HB58	689 aa		4.69	□□□□□ -1.66
MSI2-216	ENST00000582772	SLC40A1	Q9NP59	571 aa		4.69	□□□□□ -1.66
MSI2-216	ENST00000582772	PCDH12	Q9NPG4	1184 aa		4.69	□□□□□ -1.66
MSI2-216	ENST00000582772	KLHL1	Q9NR64	748 aa		4.69	□□□□□ -1.66
MSI2-216	ENST00000582772	SLC22A11	Q9NSA0	550 aa		4.69	□□□□□ -1.66
MSI2-216	ENST00000582772	TFIP11	Q9UBB9	837 aa	Known RBP	4.69	□□□□□ -1.66
MSI2-216	ENST00000582772	SERTAD3	Q9UJW9	196 aa		4.69	□□□□□ -1.66
MSI2-216	ENST00000582772	ZKSCAN5	Q9Y2L8	839 aa		4.69	□□□□□ -1.66
MSI2-216	ENST00000582772	MFHAS1	Q9Y4C4	1052 aa		4.69	□□□□□ -1.66
MSI2-216	ENST00000582772	NSG1	A0A0A6YYJ2	146 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	SLC5A10	A0PJK1	596 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	FAM234B	A2RU67	622 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	TMEM150C	B9EJG8	249 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	KRIT1	O00522	736 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	WNT7A	O00755	349 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	MAP2K7	O14733	419 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	IKBKB	O14920	756 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	TIMM23	O14925	209 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	PFKFB2	O60825	505 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	WFS1	O76024	890 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	NEURL1	O76050	574 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	VIP	P01282	170 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	APOE	P02649	317 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	TPH1	P17752	444 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	CEACAM8	P31997	349 aa	Predicted RBP	4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	SLC19A1	P41440	591 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	NSG1	P42857	185 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	CDH4	P55283	916 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	MARS	P56192	900 aa	Known RBP	4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	MYL6	P60660	151 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	LSM11	P83369	360 aa	Known RBP eCLIP	4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	ZNF33B	Q06732	778 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	PAK1	Q13153	545 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	GPR18	Q14330	331 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	ANKRD1	Q15327	319 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	TAF5	Q15542	800 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	NKG7	Q16617	165 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	SLC5A12	Q1EHB4	618 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	ATP13A4	Q4VNC1	1196 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	RNF20	Q5VTR2	975 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	AFMID	Q63HM1	303 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	FBXL22	Q6P050	247 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	KLHL35	Q6PF15	583 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	LIPI	Q6XZB0	460 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	SEM1	Q6ZVN7	128 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	ABHD13	Q7L211	337 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	KCNK18	Q7Z418	384 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	CAND1	Q86VP6	1230 aa	Known RBP	4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	HORMAD2	Q8N7B1	307 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	SYT14	Q8NB59	555 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	NAXE	Q8NCW5	288 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	OR6K2	Q8NGY2	324 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	MUC7	Q8TAX7	377 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	GTF3A	Q92664	365 aa	Known RBP	4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	PROX1	Q92786	737 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	BRF1	Q92994	677 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	UBE2F	Q969M7	185 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	PIK3IP1	Q96FE7	263 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	DOCK7	Q96N67	2140 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	OCSTAMP	Q9BR26	566 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	AGXT2	Q9BYV1	514 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	IMPG2	Q9BZV3	1241 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	TM6SF2	Q9BZW4	377 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	PARVG	Q9HBI0	331 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	ZNF624	Q9P2J8	865 aa	Predicted RBP	4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	DHCR7	Q9UBM7	475 aa	Known RBP	4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	CCDC39	Q9UFE4	941 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	ATP8A1	Q9Y2Q0	1164 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	PCDHGB3	Q9Y5G1	929 aa		4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	4.68	□□□□□ -1.66
MSI2-216	ENST00000582772	EXPH5	Q8NEV8	1989 aa		4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	UBA6	A0AVT1	1052 aa	Predicted RBP	4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	KCNU1	A8MYU2	1149 aa		4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	HS3ST1	O14792	307 aa		4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	SUN1	O94901	812 aa		4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	LETM1	O95202	739 aa	Predicted RBP	4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	ADCY5	O95622	1261 aa		4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	MOCS2	O96007	188 aa	Predicted RBP	4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	ELFN1	P0C7U0	828 aa		4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	ITGAM	P11215	1152 aa		4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	PIM1	P11309	404 aa	Predicted RBP	4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	GABRA1	P14867	456 aa		4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	ITGAX	P20702	1163 aa		4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	CD96	P40200	585 aa		4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	DNA2	P51530	1060 aa		4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	DAOA	P59103	153 aa		4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	SNRPD1	P62314	119 aa	Known RBP	4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	PTS	Q03393	145 aa		4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	BIRC3	Q13489	604 aa		4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	KRT32	Q14532	448 aa		4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	ZNF394	Q53GI3	561 aa		4.67	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms