RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 NAA15Q9BXJ9 866 aaKnown RBP7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 SLC7A5P2Q9GIP4 190 aa7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 KLHL25Q9H0H3 589 aa7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 DHX35Q9H5Z1 703 aaKnown RBP7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 C1GALT1Q9NS00 363 aa7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 ETNK2Q9NVF9 386 aa7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 PKD2L2Q9NZM6 624 aa7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 IFT80Q9P2H3 777 aaPredicted RBP7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 DHCR7Q9UBM7 475 aaKnown RBP7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 NDOR1Q9UHB4 597 aa7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 GPN3Q9UHW5 284 aaPredicted RBP7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 SLC24A2Q9UI40 661 aa7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 SERTAD3Q9UJW9 196 aa7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 POMT2Q9UKY4 750 aa7.41□□□□□ -1.22
SMARCE1-217ENST00000580654 GTF3C1Q12789 2109 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 TRAV17A0A0B4J275 112 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 BICDL2A1A5D9 508 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 RGSL1A5PLK6 1076 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 ADAM10O14672 748 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 ZNHIT1O43257 154 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 CDK14O94921 469 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 SLCO2B1O94956 709 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 SMC2O95347 1197 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 F10P00742 488 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 MTHFD1P11586 935 aaKnown RBP7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 SOX11P35716 441 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 GABRA4P48169 554 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 EPHB1P54762 984 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 CASP6P55212 293 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 ARG2P78540 354 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 DCDP81605 110 aaKnown RBP7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 DSC2Q02487 901 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 FOLH1Q04609 750 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 RBPJQ06330 500 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 TFF3Q07654 80 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 DMPKQ09013 629 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 QPCTQ16769 361 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 FAM20CQ8IXL6 584 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 LINC00528Q8N1L1 170 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 TEX26Q8N6G2 289 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 C3orf20Q8ND61 904 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 LPCAT1Q8NF37 534 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 DNAJB8Q8NHS0 232 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 NACC2Q96BF6 587 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 ITPKCQ96DU7 683 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 SNRNP25Q9BV90 132 aaKnown RBP7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 PITPNM3Q9BZ71 974 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 SPRTNQ9H040 489 aaPredicted RBP7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 VPS16Q9H269 839 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 CBX8Q9HC52 389 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 FAM60AQ9NP50 221 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 NT5MQ9NPB1 228 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 ZNF358Q9NW07 568 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 CWC15Q9P013 229 aaKnown RBP7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 ST6GALNAC2Q9UJ37 374 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 DNPEPQ9ULA0 475 aa7.4□□□□□ -1.22
SMARCE1-217ENST00000580654 INTS1Q8N201 2190 aaKnown RBP7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 BTN3A3O00478 584 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 DAPK3O43293 454 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 PRAMEF2O60811 474 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 RASAL1O95294 804 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 CRYABP02511 175 aaKnown RBP7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 HEXAP06865 529 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 CD63P08962 238 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 UGT1A4P22310 534 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 PRDX3P30048 256 aaKnown RBP7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 PPP1R2P41236 205 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 CTSCP53634 463 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 DCDC1P59894 354 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 CDR2Q01850 454 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 GUCA2AQ02747 115 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 NIPAL4Q0D2K0 466 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 NFE2L1Q14494 772 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 DEFB110Q30KQ9 67 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 TUBB8Q3ZCM7 444 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 NKAIN1Q4KMZ8 207 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 ANKRD20A8PQ5CZ79 823 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 PPP6R3Q5H9R7 873 aaPredicted RBP7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 MARC1Q5VT66 337 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 KLHDC7AQ5VTJ3 777 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 IRAK1BP1Q5VVH5 260 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 ALG1LQ6GMV1 187 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 ARMC6Q6NXE6 501 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 SPPL2CQ8IUH8 684 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 TRAPPC5Q8IUR0 188 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 DMRTC2Q8IXT2 367 aaPredicted RBP7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 TRAM1L1Q8N609 369 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 AMER2Q8N7J2 671 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 DNAAF3Q8N9W5 541 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 WFDC11Q8NEX6 87 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 OR11G2Q8NGC1 345 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 OR4E2Q8NGC2 313 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 ARRDC2Q8TBH0 407 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 PROKR1Q8TCW9 393 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 NUDT8Q8WV74 236 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 ZNF592Q92610 1267 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 HAS2Q92819 552 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 SDCCAG3Q96C92 435 aa7.39□□□□□ -1.23
SMARCE1-217ENST00000580654 MCEEQ96PE7 176 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms