RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 ALG6Q9Y672 507 aa17.39■□□□□ 0.37
MKS1-209ENST00000580127 ARL5AQ9Y689 179 aa17.39■□□□□ 0.37
MKS1-209ENST00000580127 AP1M2Q9Y6Q5 423 aa17.39■□□□□ 0.37
MKS1-209ENST00000580127 PEX12O00623 359 aa17.38■□□□□ 0.37
MKS1-209ENST00000580127 GAPDHSO14556 408 aaPredicted RBP17.38■□□□□ 0.37
MKS1-209ENST00000580127 GPR39O43194 453 aa17.38■□□□□ 0.37
MKS1-209ENST00000580127 ZNF189O75820 626 aaPredicted RBP17.38■□□□□ 0.37
MKS1-209ENST00000580127 GSTM1P09488 218 aa17.38■□□□□ 0.37
MKS1-209ENST00000580127 ATP1B2P14415 290 aaPredicted RBP17.38■□□□□ 0.37
MKS1-209ENST00000580127 GSTM4Q03013 218 aa17.38■□□□□ 0.37
MKS1-209ENST00000580127 LLGL1Q15334 1064 aa17.38■□□□□ 0.37
MKS1-209ENST00000580127 GPR33Q49SQ1 333 aa17.38■□□□□ 0.37
MKS1-209ENST00000580127 DUS1LQ6P1R4 473 aaKnown RBP17.38■□□□□ 0.37
MKS1-209ENST00000580127 RANBP10Q6VN20 620 aa17.38■□□□□ 0.37
MKS1-209ENST00000580127 KATNAL2Q8IYT4 538 aa17.38■□□□□ 0.37
MKS1-209ENST00000580127 FDCSPQ8NFU4 85 aa17.38■□□□□ 0.37
MKS1-209ENST00000580127 PRR7Q8TB68 274 aa17.38■□□□□ 0.37
MKS1-209ENST00000580127 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.38■□□□□ 0.37
MKS1-209ENST00000580127 QKIQ96PU8 341 aaKnown RBP eCLIP17.38■□□□□ 0.37
MKS1-209ENST00000580127 CHP1Q99653 195 aa17.38■□□□□ 0.37
MKS1-209ENST00000580127 FICDQ9BVA6 458 aa17.38■□□□□ 0.37
MKS1-209ENST00000580127 MFRPQ9BY79 579 aa17.38■□□□□ 0.37
MKS1-209ENST00000580127 GBA3Q9H227 469 aa17.38■□□□□ 0.37
MKS1-209ENST00000580127 TFB2MQ9H5Q4 396 aaKnown RBP17.38■□□□□ 0.37
MKS1-209ENST00000580127 ABHD10Q9NUJ1 306 aa17.38■□□□□ 0.37
MKS1-209ENST00000580127 FEZ2Q9UHY8 353 aaPredicted RBP17.38■□□□□ 0.37
MKS1-209ENST00000580127 RELNP78509 3460 aa17.37■□□□□ 0.37
MKS1-209ENST00000580127 CTNNA2P26232 953 aa17.37■□□□□ 0.37
MKS1-209ENST00000580127 RORAP35398 523 aa17.37■□□□□ 0.37
MKS1-209ENST00000580127 CETN2P41208 172 aa17.37■□□□□ 0.37
MKS1-209ENST00000580127 RPA4Q13156 261 aa17.37■□□□□ 0.37
MKS1-209ENST00000580127 ELOAQ14241 798 aaKnown RBP17.37■□□□□ 0.37
MKS1-209ENST00000580127 SSPNQ14714 243 aa17.37■□□□□ 0.37
MKS1-209ENST00000580127 PTPRCAPQ14761 206 aa17.37■□□□□ 0.37
MKS1-209ENST00000580127 NCF4Q15080 339 aa17.37■□□□□ 0.37
MKS1-209ENST00000580127 EIF2S3LQ2VIR3 472 aaKnown RBP17.37■□□□□ 0.37
MKS1-209ENST00000580127 FBXO38Q6PIJ6 1188 aa17.37■□□□□ 0.37
MKS1-209ENST00000580127 SNX20Q7Z614 316 aa17.37■□□□□ 0.37
MKS1-209ENST00000580127 AMIGO1Q86WK6 493 aa17.37■□□□□ 0.37
MKS1-209ENST00000580127 IQCKQ8N0W5 287 aa17.37■□□□□ 0.37
MKS1-209ENST00000580127 NXPE1Q8N323 547 aa17.37■□□□□ 0.37
MKS1-209ENST00000580127 CLEC1AQ8NC01 280 aa17.37■□□□□ 0.37
MKS1-209ENST00000580127 OR1L3Q8NH93 324 aa17.37■□□□□ 0.37
MKS1-209ENST00000580127 TM9SF4Q92544 642 aa17.37■□□□□ 0.37
MKS1-209ENST00000580127 HAUS1Q96CS2 278 aa17.37■□□□□ 0.37
MKS1-209ENST00000580127 RMDN2Q96LZ7 410 aa17.37■□□□□ 0.37
MKS1-209ENST00000580127 SMAD5Q99717 465 aaKnown RBP17.37■□□□□ 0.37
MKS1-209ENST00000580127 LUC7LQ9NQ29 371 aaKnown RBP17.37■□□□□ 0.37
MKS1-209ENST00000580127 PCMTD2Q9NV79 361 aa17.37■□□□□ 0.37
MKS1-209ENST00000580127 FKBPLQ9UIM3 349 aa17.37■□□□□ 0.37
MKS1-209ENST00000580127 hCG_1818297A0A087WSY0 165 aa17.36■□□□□ 0.37
MKS1-209ENST00000580127 TCP11X1B4DZS4 312 aa17.36■□□□□ 0.37
MKS1-209ENST00000580127 APOC4-APOC2K7ER74 178 aa17.36■□□□□ 0.37
MKS1-209ENST00000580127 KDM1AO60341 852 aa17.36■□□□□ 0.37
MKS1-209ENST00000580127 IPO13O94829 963 aaKnown RBP17.36■□□□□ 0.37
MKS1-209ENST00000580127 APOC2P02655 101 aa17.36■□□□□ 0.37
MKS1-209ENST00000580127 PRLHRP49683 370 aa17.36■□□□□ 0.37
MKS1-209ENST00000580127 HADHBP55084 474 aaKnown RBP17.36■□□□□ 0.37
MKS1-209ENST00000580127 COPS2P61201 443 aa17.36■□□□□ 0.37
MKS1-209ENST00000580127 KYNUQ16719 465 aa17.36■□□□□ 0.37
MKS1-209ENST00000580127 VWA5B1Q5TIE3 1220 aa17.36■□□□□ 0.37
MKS1-209ENST00000580127 LYPLAL1Q5VWZ2 237 aa17.36■□□□□ 0.37
MKS1-209ENST00000580127 DAAM2Q86T65 1068 aa17.36■□□□□ 0.37
MKS1-209ENST00000580127 CNGA4Q8IV77 575 aa17.36■□□□□ 0.37
MKS1-209ENST00000580127 ZBTB2Q8N680 514 aa17.36■□□□□ 0.37
MKS1-209ENST00000580127 TCTN2Q96GX1 697 aa17.36■□□□□ 0.37
MKS1-209ENST00000580127 ALS2CR12Q96Q35 445 aa17.36■□□□□ 0.37
MKS1-209ENST00000580127 NUDT9Q9BW91 350 aa17.36■□□□□ 0.37
MKS1-209ENST00000580127 PITPNM3Q9BZ71 974 aa17.36■□□□□ 0.37
MKS1-209ENST00000580127 CREBBPQ92793 2442 aa17.35■□□□□ 0.37
MKS1-209ENST00000580127 AGAP14A8MT82 685 aa17.35■□□□□ 0.37
MKS1-209ENST00000580127 ZNF749O43361 778 aa17.35■□□□□ 0.37
MKS1-209ENST00000580127 SEMA7AO75326 666 aa17.35■□□□□ 0.37
MKS1-209ENST00000580127 LCA5LO95447 670 aa17.35■□□□□ 0.37
MKS1-209ENST00000580127 PTMSP20962 102 aa17.35■□□□□ 0.37
MKS1-209ENST00000580127 CA5AP35218 305 aa17.35■□□□□ 0.37
MKS1-209ENST00000580127 MAGEA1P43355 309 aa17.35■□□□□ 0.37
MKS1-209ENST00000580127 ABRQ12979 859 aa17.35■□□□□ 0.37
MKS1-209ENST00000580127 PRAMEF17Q5VTA0 474 aa17.35■□□□□ 0.37
MKS1-209ENST00000580127 MLIPQ5VWP3 458 aa17.35■□□□□ 0.37
MKS1-209ENST00000580127 SLC6A19Q695T7 634 aa17.35■□□□□ 0.37
MKS1-209ENST00000580127 LCN10Q6JVE6 187 aa17.35■□□□□ 0.37
MKS1-209ENST00000580127 BBS12Q6ZW61 710 aa17.35■□□□□ 0.37
MKS1-209ENST00000580127 CDKL3Q8IVW4 592 aaPredicted RBP17.35■□□□□ 0.37
MKS1-209ENST00000580127 TFGQ92734 400 aaPredicted RBP17.35■□□□□ 0.37
MKS1-209ENST00000580127 PPM1MQ96MI6 270 aa17.35■□□□□ 0.37
MKS1-209ENST00000580127 TRAPPC9Q96Q05 1148 aa17.35■□□□□ 0.37
MKS1-209ENST00000580127 HEMGNQ9BXL5 484 aa17.35■□□□□ 0.37
MKS1-209ENST00000580127 ZDHHC3Q9NYG2 299 aa17.35■□□□□ 0.37
MKS1-209ENST00000580127 PIKFYVEQ9Y2I7 2098 aa17.35■□□□□ 0.37
MKS1-209ENST00000580127 SHANK1Q9Y566 2161 aa17.35■□□□□ 0.37
MKS1-209ENST00000580127 F8W8V4 182 aa17.34■□□□□ 0.37
MKS1-209ENST00000580127 BTN3A1O00481 513 aa17.34■□□□□ 0.37
MKS1-209ENST00000580127 OR2B3O76000 313 aa17.34■□□□□ 0.37
MKS1-209ENST00000580127 ST6GAL1P15907 406 aa17.34■□□□□ 0.37
MKS1-209ENST00000580127 RBL1P28749 1068 aa17.34■□□□□ 0.37
MKS1-209ENST00000580127 OTX2P32243 289 aa17.34■□□□□ 0.37
MKS1-209ENST00000580127 XIAPP98170 497 aa17.34■□□□□ 0.37
MKS1-209ENST00000580127 ATP1A4Q13733 1029 aa17.34■□□□□ 0.37
MKS1-209ENST00000580127 PTCHD3Q3KNS1 767 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms