RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 KLC3Q6P597 504 aa11.03□□□□□ -0.64
CDK5RAP3-210ENST00000578733 FBXO38Q6PIJ6 1188 aa11.03□□□□□ -0.64
CDK5RAP3-210ENST00000578733 UNC5DQ6UXZ4 953 aa11.03□□□□□ -0.64
CDK5RAP3-210ENST00000578733 FAM83HQ6ZRV2 1179 aaPredicted RBP11.03□□□□□ -0.64
CDK5RAP3-210ENST00000578733 PDZD3Q86UT5 571 aa11.03□□□□□ -0.64
CDK5RAP3-210ENST00000578733 NRROSQ86YC3 692 aa11.03□□□□□ -0.64
CDK5RAP3-210ENST00000578733 GATAD2AQ86YP4 633 aa11.03□□□□□ -0.64
CDK5RAP3-210ENST00000578733 GOLGA6L1Q8N7Z2 621 aa11.03□□□□□ -0.64
CDK5RAP3-210ENST00000578733 ARL10Q8N8L6 244 aa11.03□□□□□ -0.64
CDK5RAP3-210ENST00000578733 CCL4L1Q8NHW4 92 aa11.03□□□□□ -0.64
CDK5RAP3-210ENST00000578733 EPS8L3Q8TE67 593 aaKnown RBP11.03□□□□□ -0.64
CDK5RAP3-210ENST00000578733 SETD7Q8WTS6 366 aaKnown RBP11.03□□□□□ -0.64
CDK5RAP3-210ENST00000578733 SH3KBP1Q96B97 665 aa11.03□□□□□ -0.64
CDK5RAP3-210ENST00000578733 CXorf40BQ96DE9 158 aa11.03□□□□□ -0.64
CDK5RAP3-210ENST00000578733 LINGO1Q96FE5 620 aa11.03□□□□□ -0.64
CDK5RAP3-210ENST00000578733 C12orf66Q96MD2 445 aa11.03□□□□□ -0.64
CDK5RAP3-210ENST00000578733 OLFM1Q99784 485 aa11.03□□□□□ -0.64
CDK5RAP3-210ENST00000578733 WWP1Q9H0M0 922 aa11.03□□□□□ -0.64
CDK5RAP3-210ENST00000578733 IL21RQ9HBE5 538 aa11.03□□□□□ -0.64
CDK5RAP3-210ENST00000578733 PARD6AQ9NPB6 346 aa11.03□□□□□ -0.64
CDK5RAP3-210ENST00000578733 PRDM8Q9NQV8 689 aa11.03□□□□□ -0.64
CDK5RAP3-210ENST00000578733 SNX15Q9NRS6 342 aa11.03□□□□□ -0.64
CDK5RAP3-210ENST00000578733 POT1Q9NUX5 634 aa11.03□□□□□ -0.64
CDK5RAP3-210ENST00000578733 UCKL1Q9NWZ5 548 aa11.03□□□□□ -0.64
CDK5RAP3-210ENST00000578733 TBC1D29Q9UFV1 150 aa11.03□□□□□ -0.64
CDK5RAP3-210ENST00000578733 PSMD13Q9UNM6 376 aa11.03□□□□□ -0.64
CDK5RAP3-210ENST00000578733 ACOT9Q9Y305 439 aa11.03□□□□□ -0.64
CDK5RAP3-210ENST00000578733 NFS1Q9Y697 457 aa11.03□□□□□ -0.64
CDK5RAP3-210ENST00000578733 LAMA1P25391 3075 aa11.03□□□□□ -0.64
CDK5RAP3-210ENST00000578733 CHD8Q9HCK8 2581 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 CACNA1GO43497 2377 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 PRR19A6NJB7 356 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 ZBTB14O43829 449 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 CATP04040 527 aaKnown RBP11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 C8GP07360 202 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 CELA2BP08218 269 aaPredicted RBP11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 HIST1H2AGP0C0S8 130 aaPredicted RBP11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 ZNF37AP17032 561 aaPredicted RBP11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 XRCC1P18887 633 aaPredicted RBP11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 HIST1H2ADP20671 130 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 CYP2A7P20853 494 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 GCAP28676 217 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 DAB2P98082 770 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 FAM83EQ2M2I3 478 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 TSNAXIP1Q2TAA8 658 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 C14orf28Q4W4Y0 310 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 CEP85LQ5SZL2 805 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 IYDQ6PHW0 289 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 PAQR3Q6TCH7 311 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 TIFABQ6ZNK6 161 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 LCA5Q86VQ0 697 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 CPNE9Q8IYJ1 553 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 SLC25A45Q8N413 288 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 EID2Q8N6I1 236 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 OR2I1PQ8NGU4 316 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 OR2W6PQ8NHA6 318 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 ACMSDQ8TDX5 336 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 RHBDD1Q8TEB9 315 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 TFGQ92734 400 aaPredicted RBP11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 PDLIM5Q96HC4 596 aaKnown RBP11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 HIST1H2AHQ96KK5 128 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 ZIM3Q96PE6 472 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 HIST1H2AJQ99878 128 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 H2AFJQ9BTM1 129 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 TRIM54Q9BYV2 358 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 VPS11Q9H270 941 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 OR52A5Q9H2C5 316 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 TRIT1Q9H3H1 467 aaKnown RBP11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 MVB12BQ9H7P6 319 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 CAB39LQ9H9S4 337 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 NMRAL1Q9HBL8 299 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 IMP3Q9NV31 184 aaKnown RBP11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 SENP1Q9P0U3 644 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 GULP1Q9UBP9 304 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 POLG2Q9UHN1 485 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 ASF1AQ9Y294 204 aa11.02□□□□□ -0.65
CDK5RAP3-210ENST00000578733 A0A096LPK6 155 aa11.01□□□□□ -0.65
CDK5RAP3-210ENST00000578733 CCDC189A1A4V9 331 aa11.01□□□□□ -0.65
CDK5RAP3-210ENST00000578733 C4orf47A7E2U8 309 aa11.01□□□□□ -0.65
CDK5RAP3-210ENST00000578733 CDX4O14627 284 aaPredicted RBP11.01□□□□□ -0.65
CDK5RAP3-210ENST00000578733 SLC16A5O15375 505 aa11.01□□□□□ -0.65
CDK5RAP3-210ENST00000578733 PHGDHO43175 533 aaKnown RBP11.01□□□□□ -0.65
CDK5RAP3-210ENST00000578733 MTHFD1P11586 935 aaKnown RBP11.01□□□□□ -0.65
CDK5RAP3-210ENST00000578733 COL6A2P12110 1019 aa11.01□□□□□ -0.65
CDK5RAP3-210ENST00000578733 PDHA2P29803 388 aa11.01□□□□□ -0.65
CDK5RAP3-210ENST00000578733 LIMK1P53667 647 aa11.01□□□□□ -0.65
CDK5RAP3-210ENST00000578733 ZNF844Q08AG5 666 aa11.01□□□□□ -0.65
CDK5RAP3-210ENST00000578733 SP140Q13342 867 aa11.01□□□□□ -0.65
CDK5RAP3-210ENST00000578733 GBX1Q14549 363 aa11.01□□□□□ -0.65
CDK5RAP3-210ENST00000578733 NR0B2Q15466 257 aa11.01□□□□□ -0.65
CDK5RAP3-210ENST00000578733 RPE65Q16518 533 aa11.01□□□□□ -0.65
CDK5RAP3-210ENST00000578733 ZNF658BQ4V348 819 aaPredicted RBP11.01□□□□□ -0.65
CDK5RAP3-210ENST00000578733 ACSBG2Q5FVE4 666 aa11.01□□□□□ -0.65
CDK5RAP3-210ENST00000578733 STPG1Q5TH74 334 aa11.01□□□□□ -0.65
CDK5RAP3-210ENST00000578733 CAPRIN2Q6IMN6 1127 aaKnown RBP11.01□□□□□ -0.65
CDK5RAP3-210ENST00000578733 OGFOD3Q6PK18 319 aa11.01□□□□□ -0.65
CDK5RAP3-210ENST00000578733 NAPRTQ6XQN6 538 aa11.01□□□□□ -0.65
CDK5RAP3-210ENST00000578733 FRA10AC1Q70Z53 315 aa11.01□□□□□ -0.65
CDK5RAP3-210ENST00000578733 KANSL1Q7Z3B3 1105 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms