RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 METRNLQ641Q3 311 aa13.63□□□□□ -0.23
PPP4R1-206ENST00000577779 ACAD10Q6JQN1 1059 aa13.63□□□□□ -0.23
PPP4R1-206ENST00000577779 MEX3BQ6ZN04 569 aaKnown RBP13.63□□□□□ -0.23
PPP4R1-206ENST00000577779 TMC3Q7Z5M5 1100 aa13.63□□□□□ -0.23
PPP4R1-206ENST00000577779 BRSK1Q8TDC3 778 aa13.63□□□□□ -0.23
PPP4R1-206ENST00000577779 THOC3Q96J01 351 aaKnown RBP13.63□□□□□ -0.23
PPP4R1-206ENST00000577779 LMF1Q96S06 567 aa13.63□□□□□ -0.23
PPP4R1-206ENST00000577779 AGPAT1Q99943 283 aa13.63□□□□□ -0.23
PPP4R1-206ENST00000577779 NDC1Q9BTX1 674 aa13.63□□□□□ -0.23
PPP4R1-206ENST00000577779 PITPNM3Q9BZ71 974 aa13.63□□□□□ -0.23
PPP4R1-206ENST00000577779 TRIM7Q9C029 511 aa13.63□□□□□ -0.23
PPP4R1-206ENST00000577779 ZCCHC2Q9C0B9 1178 aaKnown RBP13.63□□□□□ -0.23
PPP4R1-206ENST00000577779 SRMSQ9H3Y6 488 aa13.63□□□□□ -0.23
PPP4R1-206ENST00000577779 SEMA3GQ9NS98 782 aa13.63□□□□□ -0.23
PPP4R1-206ENST00000577779 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.63□□□□□ -0.23
PPP4R1-206ENST00000577779 TXLNGQ9NUQ3 528 aa13.63□□□□□ -0.23
PPP4R1-206ENST00000577779 DHCR7Q9UBM7 475 aaKnown RBP13.63□□□□□ -0.23
PPP4R1-206ENST00000577779 ZNF711Q9Y462 761 aa13.63□□□□□ -0.23
PPP4R1-206ENST00000577779 AKAP6Q13023 2319 aa13.62□□□□□ -0.23
PPP4R1-206ENST00000577779 TMEM191CA6NGB0 347 aa13.62□□□□□ -0.23
PPP4R1-206ENST00000577779 TMEM200CA6NKL6 621 aa13.62□□□□□ -0.23
PPP4R1-206ENST00000577779 SOCS6O14544 535 aa13.62□□□□□ -0.23
PPP4R1-206ENST00000577779 EPHB6O15197 1021 aa13.62□□□□□ -0.23
PPP4R1-206ENST00000577779 KLHL18O94889 574 aa13.62□□□□□ -0.23
PPP4R1-206ENST00000577779 HLA-DQB2P05538 268 aa13.62□□□□□ -0.23
PPP4R1-206ENST00000577779 PVRP15151 417 aa13.62□□□□□ -0.23
PPP4R1-206ENST00000577779 CTSCP53634 463 aa13.62□□□□□ -0.23
PPP4R1-206ENST00000577779 CSNK1G2P78368 415 aa13.62□□□□□ -0.23
PPP4R1-206ENST00000577779 TIGD7Q6NT04 549 aaPredicted RBP13.62□□□□□ -0.23
PPP4R1-206ENST00000577779 TGIF2LYQ8IUE0 185 aa13.62□□□□□ -0.23
PPP4R1-206ENST00000577779 BEND7Q8N7W2 519 aaPredicted RBP13.62□□□□□ -0.23
PPP4R1-206ENST00000577779 RASGEF1AQ8N9B8 481 aa13.62□□□□□ -0.23
PPP4R1-206ENST00000577779 SPRTNQ9H040 489 aaPredicted RBP13.62□□□□□ -0.23
PPP4R1-206ENST00000577779 CLSTN2Q9H4D0 955 aa13.62□□□□□ -0.23
PPP4R1-206ENST00000577779 DEF6Q9H4E7 631 aa13.62□□□□□ -0.23
PPP4R1-206ENST00000577779 RYDENQ9NUL5 291 aaKnown RBP13.62□□□□□ -0.23
PPP4R1-206ENST00000577779 COLEC10Q9Y6Z7 277 aa13.62□□□□□ -0.23
PPP4R1-206ENST00000577779 TRAV17A0A0B4J275 112 aa13.61□□□□□ -0.23
PPP4R1-206ENST00000577779 DYTNA2CJ06 578 aa13.61□□□□□ -0.23
PPP4R1-206ENST00000577779 OR2AG2A6NM03 316 aa13.61□□□□□ -0.23
PPP4R1-206ENST00000577779 SLC19A2O60779 497 aa13.61□□□□□ -0.23
PPP4R1-206ENST00000577779 CRYABP02511 175 aaKnown RBP13.61□□□□□ -0.23
PPP4R1-206ENST00000577779 MMP2P08253 660 aa13.61□□□□□ -0.23
PPP4R1-206ENST00000577779 SLC35G4P0C7Q5 338 aa13.61□□□□□ -0.23
PPP4R1-206ENST00000577779 KLK2P20151 261 aa13.61□□□□□ -0.23
PPP4R1-206ENST00000577779 MST1P26927 711 aa13.61□□□□□ -0.23
PPP4R1-206ENST00000577779 IL1R2P27930 398 aa13.61□□□□□ -0.23
PPP4R1-206ENST00000577779 NDUFS1P28331 727 aa13.61□□□□□ -0.23
PPP4R1-206ENST00000577779 PPP2R2AP63151 447 aa13.61□□□□□ -0.23
PPP4R1-206ENST00000577779 SRSF11Q05519 484 aaKnown RBP13.61□□□□□ -0.23
PPP4R1-206ENST00000577779 BECN1Q14457 450 aa13.61□□□□□ -0.23
PPP4R1-206ENST00000577779 TUBB8Q3ZCM7 444 aa13.61□□□□□ -0.23
PPP4R1-206ENST00000577779 TMEM220Q6QAJ8 160 aa13.61□□□□□ -0.23
PPP4R1-206ENST00000577779 KIRREL2Q6UWL6 708 aa13.61□□□□□ -0.23
PPP4R1-206ENST00000577779 MLKLQ8NB16 471 aa13.61□□□□□ -0.23
PPP4R1-206ENST00000577779 CHDHQ8NE62 594 aaPredicted RBP13.61□□□□□ -0.23
PPP4R1-206ENST00000577779 LCN9Q8WX39 176 aa13.61□□□□□ -0.23
PPP4R1-206ENST00000577779 NANOS1Q8WY41 292 aaKnown RBP13.61□□□□□ -0.23
PPP4R1-206ENST00000577779 XPO4Q9C0E2 1151 aaKnown RBP13.61□□□□□ -0.23
PPP4R1-206ENST00000577779 ENKD1Q9H0I2 346 aa13.61□□□□□ -0.23
PPP4R1-206ENST00000577779 GSX1Q9H4S2 264 aaPredicted RBP13.61□□□□□ -0.23
PPP4R1-206ENST00000577779 MAGEE1Q9HCI5 957 aa13.61□□□□□ -0.23
PPP4R1-206ENST00000577779 TAS2R14Q9NYV8 317 aa13.61□□□□□ -0.23
PPP4R1-206ENST00000577779 ABI3Q9P2A4 366 aa13.61□□□□□ -0.23
PPP4R1-206ENST00000577779 FAM8A1Q9UBU6 413 aa13.61□□□□□ -0.23
PPP4R1-206ENST00000577779 TINAGQ9UJW2 476 aa13.61□□□□□ -0.23
PPP4R1-206ENST00000577779 HS3ST3B1Q9Y662 390 aa13.61□□□□□ -0.23
PPP4R1-206ENST00000577779 DNMT3AQ9Y6K1 912 aaPredicted RBP13.61□□□□□ -0.23
PPP4R1-206ENST00000577779 TMCO5BA8MYB1 307 aa13.6□□□□□ -0.23
PPP4R1-206ENST00000577779 H3BMH7 237 aa13.6□□□□□ -0.23
PPP4R1-206ENST00000577779 BTN3A1O00481 513 aa13.6□□□□□ -0.23
PPP4R1-206ENST00000577779 ZSCAN9O15535 394 aaPredicted RBP13.6□□□□□ -0.23
PPP4R1-206ENST00000577779 MFSD11O43934 449 aa13.6□□□□□ -0.23
PPP4R1-206ENST00000577779 PCK1P35558 622 aa13.6□□□□□ -0.23
PPP4R1-206ENST00000577779 TNFSF10P50591 281 aa13.6□□□□□ -0.23
PPP4R1-206ENST00000577779 GALNT2Q10471 571 aa13.6□□□□□ -0.23
PPP4R1-206ENST00000577779 C3AR1Q16581 482 aa13.6□□□□□ -0.23
PPP4R1-206ENST00000577779 IFI16Q16666 785 aaKnown RBP13.6□□□□□ -0.23
PPP4R1-206ENST00000577779 DEFB110Q30KQ9 67 aa13.6□□□□□ -0.23
PPP4R1-206ENST00000577779 BOLA3Q53S33 107 aa13.6□□□□□ -0.23
PPP4R1-206ENST00000577779 CSPG4Q6UVK1 2322 aa13.6□□□□□ -0.23
PPP4R1-206ENST00000577779 ZNF655Q8N720 491 aaPredicted RBP13.6□□□□□ -0.23
PPP4R1-206ENST00000577779 ADAMTS18Q8TE60 1221 aa13.6□□□□□ -0.23
PPP4R1-206ENST00000577779 PCDH18Q9HCL0 1135 aa13.6□□□□□ -0.23
PPP4R1-206ENST00000577779 GPAMQ9HCL2 828 aa13.6□□□□□ -0.23
PPP4R1-206ENST00000577779 BPIFA1Q9NP55 256 aa13.6□□□□□ -0.23
PPP4R1-206ENST00000577779 IRAK4Q9NWZ3 460 aa13.6□□□□□ -0.23
PPP4R1-206ENST00000577779 TAB2Q9NYJ8 693 aa13.6□□□□□ -0.23
PPP4R1-206ENST00000577779 PLA2G3Q9NZ20 509 aa13.6□□□□□ -0.23
PPP4R1-206ENST00000577779 ACSL5Q9ULC5 683 aa13.6□□□□□ -0.23
PPP4R1-206ENST00000577779 BTN3A3O00478 584 aa13.59□□□□□ -0.23
PPP4R1-206ENST00000577779 MT-CYBP00156 380 aaPredicted RBP13.59□□□□□ -0.23
PPP4R1-206ENST00000577779 TCF4P15884 667 aa13.59□□□□□ -0.23
PPP4R1-206ENST00000577779 CCNCP24863 283 aa13.59□□□□□ -0.23
PPP4R1-206ENST00000577779 LDLRAP1Q5SW96 308 aa13.59□□□□□ -0.23
PPP4R1-206ENST00000577779 FNBP1LQ5T0N5 605 aa13.59□□□□□ -0.23
PPP4R1-206ENST00000577779 CCDC122Q5T0U0 273 aa13.59□□□□□ -0.23
PPP4R1-206ENST00000577779 HOOK3Q86VS8 718 aa13.59□□□□□ -0.23
PPP4R1-206ENST00000577779 ACBD4Q8NC06 268 aa13.59□□□□□ -0.23
PPP4R1-206ENST00000577779 ACVR1CQ8NER5 493 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms