RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 MTMR11A4FU01 709 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 MEGF11A6BM72 1044 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 CCDC154A6NI56 674 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 SYCE1LA8MT33 242 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 A8MX80 341 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 ACSL4O60488 711 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 ADAMTS4O75173 837 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 OR4F21O95013 312 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 GJB5O95377 273 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 CLIC3O95833 236 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 CKBP12277 381 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 MTHFD2P13995 350 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 PKMP14618 531 aaKnown RBP5.28□□□□□ -1.56
VAPA-203ENST00000577539 ZNF26P17031 533 aaPredicted RBP5.28□□□□□ -1.56
VAPA-203ENST00000577539 CTPS1P17812 591 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 CA8P35219 290 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 PIK3CGP48736 1102 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 NR1H2P55055 460 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 RPL26P61254 145 aaKnown RBP5.28□□□□□ -1.56
VAPA-203ENST00000577539 NRG1Q02297 640 aaPredicted RBP5.28□□□□□ -1.56
VAPA-203ENST00000577539 PRKCQQ04759 706 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 NADSYN1Q6IA69 706 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 AFTPHQ6ULP2 937 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 BVESQ8NE79 360 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 ZFP28Q8NHY6 868 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 METTL6Q8TCB7 284 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 L3HYPDHQ96EM0 354 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 VPS50Q96JG6 964 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 EGFL8Q99944 293 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 KCTD14Q9BQ13 255 aaPredicted RBP5.28□□□□□ -1.56
VAPA-203ENST00000577539 APOL5Q9BWW9 433 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 TFB2MQ9H5Q4 396 aaKnown RBP5.28□□□□□ -1.56
VAPA-203ENST00000577539 LIN28AQ9H9Z2 209 aaKnown RBP5.28□□□□□ -1.56
VAPA-203ENST00000577539 TMEFF2Q9UIK5 374 aaPredicted RBP5.28□□□□□ -1.56
VAPA-203ENST00000577539 RAI2Q9Y5P3 530 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 SLC30A1Q9Y6M5 507 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 ABHD14A-ACY1A0A1B0GW23 586 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 PLOD2O00469 737 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 TRIM24O15164 1050 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 INSIG1O15503 277 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 SNAP91O60641 907 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 GMNNO75496 209 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 SPATA31D3P0C874 917 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 HOXB8P17481 243 aaPredicted RBP5.28□□□□□ -1.56
VAPA-203ENST00000577539 OGNP20774 298 aaKnown RBP5.28□□□□□ -1.56
VAPA-203ENST00000577539 LPOP22079 712 aaPredicted RBP5.28□□□□□ -1.56
VAPA-203ENST00000577539 SLC26A3P40879 764 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 CTSKP43235 329 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 MAPKAPK2P49137 400 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 ACADVLP49748 655 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 ACLYP53396 1101 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 SH3BGRP55822 239 aaPredicted RBP5.28□□□□□ -1.56
VAPA-203ENST00000577539 IL2P60568 153 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 UFM1P61960 85 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 ESRRGP62508 458 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 TRAP1Q12931 704 aaKnown RBP5.28□□□□□ -1.56
VAPA-203ENST00000577539 OTUD3Q5T2D3 398 aaPredicted RBP5.28□□□□□ -1.56
VAPA-203ENST00000577539 RNF219Q5W0B1 726 aaPredicted RBP5.28□□□□□ -1.56
VAPA-203ENST00000577539 PTRHD1Q6GMV3 140 aaKnown RBP5.28□□□□□ -1.56
VAPA-203ENST00000577539 FUT10Q6P4F1 479 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 CYHR1Q6ZMK1 362 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 SPATA31D4Q6ZUB0 917 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 RALGPS2Q86X27 583 aaPredicted RBP5.28□□□□□ -1.56
VAPA-203ENST00000577539 PIANPQ8IYJ0 282 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 CARNMT1Q8N4J0 409 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 METTL25Q8N6Q8 603 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 DBF4BQ8NFT6 615 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 KIAA1191Q96A73 305 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 LRRC58Q96CX6 371 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 ATOH8Q96SQ7 321 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 TM6SF2Q9BZW4 377 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 TUBB1Q9H4B7 451 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 PFDN4Q9NQP4 134 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 TMEM181Q9P2C4 612 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 THEGQ9P2T0 379 aa5.28□□□□□ -1.56
VAPA-203ENST00000577539 PDCD11Q14690 1871 aaKnown RBP5.27□□□□□ -1.57
VAPA-203ENST00000577539 OR6C75A6NL08 312 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 H0Y626 953 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 SOCS2O14508 198 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 SYN3O14994 580 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 ARPC2O15144 300 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 PRODHO43272 600 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 HTRA2O43464 458 aaPredicted RBP5.27□□□□□ -1.57
VAPA-203ENST00000577539 KERAO60938 352 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 TRIM16O95361 564 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 EOMESO95936 686 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 CYBBP04839 570 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 C8BP07358 591 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 IDO1P14902 403 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 ZNF23P17027 643 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 EEF1B2P24534 225 aaKnown RBP5.27□□□□□ -1.57
VAPA-203ENST00000577539 HMOX2P30519 316 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 SLC6A4P31645 630 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 OR1D2P34982 312 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 TPD52P55327 224 aaPredicted RBP5.27□□□□□ -1.57
VAPA-203ENST00000577539 ATP6V0D1P61421 351 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 LIPEQ05469 1076 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 DSC1Q08554 894 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 GALNT1Q10472 559 aaPredicted RBP5.27□□□□□ -1.57
VAPA-203ENST00000577539 LSAMPQ13449 338 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms