RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 ARHGAP40Q5TG30 622 aa14.86□□□□□ -0.03
SMG6-220ENST00000576218 IZUMO3Q5VZ72 239 aa14.86□□□□□ -0.03
SMG6-220ENST00000576218 ARMC3Q5W041 872 aa14.86□□□□□ -0.03
SMG6-220ENST00000576218 KIAA0930Q6ICG6 404 aaPredicted RBP14.86□□□□□ -0.03
SMG6-220ENST00000576218 SYDE1Q6ZW31 735 aaPredicted RBP14.86□□□□□ -0.03
SMG6-220ENST00000576218 PRSS42Q7Z5A4 293 aa14.86□□□□□ -0.03
SMG6-220ENST00000576218 CAND1Q86VP6 1230 aaKnown RBP14.86□□□□□ -0.03
SMG6-220ENST00000576218 LRRC6Q86X45 466 aa14.86□□□□□ -0.03
SMG6-220ENST00000576218 RASGRP3Q8IV61 690 aa14.86□□□□□ -0.03
SMG6-220ENST00000576218 KRT222Q8N1A0 295 aa14.86□□□□□ -0.03
SMG6-220ENST00000576218 IL22RA1Q8N6P7 574 aa14.86□□□□□ -0.03
SMG6-220ENST00000576218 SIDT2Q8NBJ9 832 aaKnown RBP14.86□□□□□ -0.03
SMG6-220ENST00000576218 ASZ1Q8WWH4 475 aa14.86□□□□□ -0.03
SMG6-220ENST00000576218 UBXN4Q92575 508 aa14.86□□□□□ -0.03
SMG6-220ENST00000576218 CRELD1Q96HD1 420 aa14.86□□□□□ -0.03
SMG6-220ENST00000576218 ZPBPQ9BS86 351 aa14.86□□□□□ -0.03
SMG6-220ENST00000576218 B3GNT4Q9C0J1 378 aa14.86□□□□□ -0.03
SMG6-220ENST00000576218 ZNF768Q9H5H4 540 aaKnown RBP14.86□□□□□ -0.03
SMG6-220ENST00000576218 EPHA6Q9UF33 1036 aa14.86□□□□□ -0.03
SMG6-220ENST00000576218 VPS9D1Q9Y2B5 631 aa14.86□□□□□ -0.03
SMG6-220ENST00000576218 FAM237BA0A1B0GVD1 139 aa14.85□□□□□ -0.03
SMG6-220ENST00000576218 TLCD2A6NGC4 264 aa14.85□□□□□ -0.03
SMG6-220ENST00000576218 IQCF5A8MTL0 148 aa14.85□□□□□ -0.03
SMG6-220ENST00000576218 E5RI56 91 aa14.85□□□□□ -0.03
SMG6-220ENST00000576218 CCDC188H7C350 402 aa14.85□□□□□ -0.03
SMG6-220ENST00000576218 MATN2O00339 956 aa14.85□□□□□ -0.03
SMG6-220ENST00000576218 DNALI1O14645 258 aaPredicted RBP14.85□□□□□ -0.03
SMG6-220ENST00000576218 RPN2P04844 631 aa14.85□□□□□ -0.03
SMG6-220ENST00000576218 CDH3P22223 829 aa14.85□□□□□ -0.03
SMG6-220ENST00000576218 PPP1CAP62136 330 aa14.85□□□□□ -0.03
SMG6-220ENST00000576218 MC2RQ01718 297 aa14.85□□□□□ -0.03
SMG6-220ENST00000576218 TGIF1Q15583 401 aa14.85□□□□□ -0.03
SMG6-220ENST00000576218 OTOAQ7RTW8 1153 aa14.85□□□□□ -0.03
SMG6-220ENST00000576218 GPR155Q7Z3F1 870 aa14.85□□□□□ -0.03
SMG6-220ENST00000576218 CREG2Q8IUH2 290 aa14.85□□□□□ -0.03
SMG6-220ENST00000576218 C17orf53Q8N3J3 647 aaPredicted RBP14.85□□□□□ -0.03
SMG6-220ENST00000576218 NAT8LQ8N9F0 302 aa14.85□□□□□ -0.03
SMG6-220ENST00000576218 OR52E1Q8NGJ3 308 aa14.85□□□□□ -0.03
SMG6-220ENST00000576218 CFAP61Q8NHU2 1237 aa14.85□□□□□ -0.03
SMG6-220ENST00000576218 GABPB2Q8TAK5 448 aaPredicted RBP14.85□□□□□ -0.03
SMG6-220ENST00000576218 PMEPA1Q969W9 287 aa14.85□□□□□ -0.03
SMG6-220ENST00000576218 STAMBPL1Q96FJ0 436 aa14.85□□□□□ -0.03
SMG6-220ENST00000576218 ELMO2Q96JJ3 720 aa14.85□□□□□ -0.03
SMG6-220ENST00000576218 OR6C1Q96RD1 312 aa14.85□□□□□ -0.03
SMG6-220ENST00000576218 CCNL2Q96S94 520 aaPredicted RBP14.85□□□□□ -0.03
SMG6-220ENST00000576218 CD180Q99467 661 aa14.85□□□□□ -0.03
SMG6-220ENST00000576218 CARD6Q9BX69 1037 aa14.85□□□□□ -0.03
SMG6-220ENST00000576218 RAB33BQ9H082 229 aa14.85□□□□□ -0.03
SMG6-220ENST00000576218 CCDC68Q9H2F9 335 aa14.85□□□□□ -0.03
SMG6-220ENST00000576218 CPNE5Q9HCH3 593 aa14.85□□□□□ -0.03
SMG6-220ENST00000576218 FBXO8Q9NRD0 319 aa14.85□□□□□ -0.03
SMG6-220ENST00000576218 C20orf96Q9NUD7 363 aaPredicted RBP14.85□□□□□ -0.03
SMG6-220ENST00000576218 RNF14Q9UBS8 474 aa14.85□□□□□ -0.03
SMG6-220ENST00000576218 PCYOX1Q9UHG3 505 aa14.85□□□□□ -0.03
SMG6-220ENST00000576218 POLG2Q9UHN1 485 aa14.85□□□□□ -0.03
SMG6-220ENST00000576218 ACSL6Q9UKU0 697 aa14.85□□□□□ -0.03
SMG6-220ENST00000576218 NEU2Q9Y3R4 380 aa14.85□□□□□ -0.03
SMG6-220ENST00000576218 PCDHGA3Q9Y5H0 932 aa14.85□□□□□ -0.03
SMG6-220ENST00000576218 ADAMTS20P59510 1910 aa14.84□□□□□ -0.03
SMG6-220ENST00000576218 H3BMM5 538 aa14.84□□□□□ -0.03
SMG6-220ENST00000576218 KPNA5O15131 536 aa14.84□□□□□ -0.03
SMG6-220ENST00000576218 OGNP20774 298 aaKnown RBP14.84□□□□□ -0.03
SMG6-220ENST00000576218 FMO4P31512 558 aa14.84□□□□□ -0.03
SMG6-220ENST00000576218 CCR7P32248 378 aa14.84□□□□□ -0.03
SMG6-220ENST00000576218 LONRF1Q17RB8 773 aa14.84□□□□□ -0.03
SMG6-220ENST00000576218 ANKRD20A4Q4UJ75 823 aa14.84□□□□□ -0.03
SMG6-220ENST00000576218 TMTC4Q5T4D3 741 aa14.84□□□□□ -0.03
SMG6-220ENST00000576218 RNASEH2BQ5TBB1 312 aaKnown RBP14.84□□□□□ -0.03
SMG6-220ENST00000576218 ZNF470Q6ECI4 717 aa14.84□□□□□ -0.03
SMG6-220ENST00000576218 NEPROQ6NW34 567 aa14.84□□□□□ -0.03
SMG6-220ENST00000576218 TTC23LQ6PF05 361 aa14.84□□□□□ -0.03
SMG6-220ENST00000576218 AMIGO1Q86WK6 493 aa14.84□□□□□ -0.03
SMG6-220ENST00000576218 TBC1D21Q8IYX1 336 aa14.84□□□□□ -0.03
SMG6-220ENST00000576218 ZSCAN1Q8NBB4 408 aa14.84□□□□□ -0.03
SMG6-220ENST00000576218 OR5AR1Q8NGP9 310 aa14.84□□□□□ -0.03
SMG6-220ENST00000576218 SLCO2A1Q92959 643 aa14.84□□□□□ -0.03
SMG6-220ENST00000576218 TCF12Q99081 682 aa14.84□□□□□ -0.03
SMG6-220ENST00000576218 MAP3K3Q99759 626 aa14.84□□□□□ -0.03
SMG6-220ENST00000576218 ULBP3Q9BZM4 244 aa14.84□□□□□ -0.03
SMG6-220ENST00000576218 TRIM31Q9BZY9 425 aa14.84□□□□□ -0.03
SMG6-220ENST00000576218 XKR8Q9H6D3 395 aa14.84□□□□□ -0.03
SMG6-220ENST00000576218 PDE7BQ9NP56 450 aa14.84□□□□□ -0.03
SMG6-220ENST00000576218 IL1RAPL1Q9NZN1 696 aa14.84□□□□□ -0.03
SMG6-220ENST00000576218 RALYQ9UKM9 306 aaKnown RBP14.84□□□□□ -0.03
SMG6-220ENST00000576218 CRYL1Q9Y2S2 319 aa14.84□□□□□ -0.03
SMG6-220ENST00000576218 PIKFYVEQ9Y2I7 2098 aa14.83□□□□□ -0.03
SMG6-220ENST00000576218 SLC5A10A0PJK1 596 aa14.83□□□□□ -0.04
SMG6-220ENST00000576218 EIF4E1BA6NMX2 242 aaKnown RBP14.83□□□□□ -0.04
SMG6-220ENST00000576218 C2orf74A8MZ97 194 aa14.83□□□□□ -0.04
SMG6-220ENST00000576218 PGAM1P18669 254 aa14.83□□□□□ -0.04
SMG6-220ENST00000576218 CHRM3P20309 590 aa14.83□□□□□ -0.04
SMG6-220ENST00000576218 RPS3P23396 243 aaKnown RBP eCLIP14.83□□□□□ -0.04
SMG6-220ENST00000576218 SHMT2P34897 504 aa14.83□□□□□ -0.04
SMG6-220ENST00000576218 SH3BP2P78314 561 aa14.83□□□□□ -0.04
SMG6-220ENST00000576218 VAC14Q08AM6 782 aa14.83□□□□□ -0.04
SMG6-220ENST00000576218 TUBB3Q13509 450 aa14.83□□□□□ -0.04
SMG6-220ENST00000576218 BBS9Q3SYG4 887 aa14.83□□□□□ -0.04
SMG6-220ENST00000576218 ZNF658BQ4V348 819 aaPredicted RBP14.83□□□□□ -0.04
SMG6-220ENST00000576218 XKR5Q6UX68 686 aa14.83□□□□□ -0.04
SMG6-220ENST00000576218 VASH2Q86V25 355 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms