RNA–Protein interactions for RNA: ENST00000575207.5

VPS53-218, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 4

Gene VPS53, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-218ENST00000575207 LRRC63Q05C16 580 aa15.57■□□□□ 0.08
VPS53-218ENST00000575207 CBLBQ13191 982 aa15.57■□□□□ 0.08
VPS53-218ENST00000575207 PCBP2Q15366 365 aaKnown RBP eCLIP15.57■□□□□ 0.08
VPS53-218ENST00000575207 ZNF766Q5HY98 468 aa15.57■□□□□ 0.08
VPS53-218ENST00000575207 Q5PR19 223 aa15.57■□□□□ 0.08
VPS53-218ENST00000575207 SMYD5Q6GMV2 418 aa15.57■□□□□ 0.08
VPS53-218ENST00000575207 HIBCHQ6NVY1 386 aaPredicted RBP15.57■□□□□ 0.08
VPS53-218ENST00000575207 ARSKQ6UWY0 536 aa15.57■□□□□ 0.08
VPS53-218ENST00000575207 ARHGAP12Q8IWW6 846 aa15.57■□□□□ 0.08
VPS53-218ENST00000575207 PGBD5Q8N414 524 aa15.57■□□□□ 0.08
VPS53-218ENST00000575207 SIRT6Q8N6T7 355 aa15.57■□□□□ 0.08
VPS53-218ENST00000575207 GPT2Q8TD30 523 aa15.57■□□□□ 0.08
VPS53-218ENST00000575207 FAM81BQ96LP2 452 aa15.57■□□□□ 0.08
VPS53-218ENST00000575207 ZNF599Q96NL3 588 aa15.57■□□□□ 0.08
VPS53-218ENST00000575207 MGME1Q9BQP7 344 aa15.57■□□□□ 0.08
VPS53-218ENST00000575207 SPRTNQ9H040 489 aaPredicted RBP15.57■□□□□ 0.08
VPS53-218ENST00000575207 TXLNGQ9NUQ3 528 aa15.57■□□□□ 0.08
VPS53-218ENST00000575207 SLC24A2Q9UI40 661 aa15.57■□□□□ 0.08
VPS53-218ENST00000575207 NOCTQ9UK39 431 aaKnown RBP15.57■□□□□ 0.08
VPS53-218ENST00000575207 A0A1B0GVL5 298 aa15.56■□□□□ 0.08
VPS53-218ENST00000575207 GSAPA4D1B5 854 aa15.56■□□□□ 0.08
VPS53-218ENST00000575207 KCNJ13O60928 360 aa15.56■□□□□ 0.08
VPS53-218ENST00000575207 CD53P19397 219 aa15.56■□□□□ 0.08
VPS53-218ENST00000575207 PRDX3P30048 256 aaKnown RBP15.56■□□□□ 0.08
VPS53-218ENST00000575207 HSF1Q00613 529 aa15.56■□□□□ 0.08
VPS53-218ENST00000575207 PRKAA1Q13131 559 aa15.56■□□□□ 0.08
VPS53-218ENST00000575207 SLC5A12Q1EHB4 618 aa15.56■□□□□ 0.08
VPS53-218ENST00000575207 CCDC71Q8IV32 467 aaPredicted RBP15.56■□□□□ 0.08
VPS53-218ENST00000575207 MESP1Q9BRJ9 268 aa15.56■□□□□ 0.08
VPS53-218ENST00000575207 PDCL3Q9H2J4 239 aa15.56■□□□□ 0.08
VPS53-218ENST00000575207 C2CD4BA6NLJ0 364 aa15.55■□□□□ 0.08
VPS53-218ENST00000575207 ZSCAN9O15535 394 aaPredicted RBP15.55■□□□□ 0.08
VPS53-218ENST00000575207 PHF1O43189 567 aaPredicted RBP15.55■□□□□ 0.08
VPS53-218ENST00000575207 BMP10O95393 424 aa15.55■□□□□ 0.08
VPS53-218ENST00000575207 SERPINA7P05543 415 aa15.55■□□□□ 0.08
VPS53-218ENST00000575207 MTHFD1P11586 935 aaKnown RBP15.55■□□□□ 0.08
VPS53-218ENST00000575207 CUL4AQ13619 759 aa15.55■□□□□ 0.08
VPS53-218ENST00000575207 ZNF569Q5MCW4 686 aa15.55■□□□□ 0.08
VPS53-218ENST00000575207 CXorf67Q86X51 503 aaPredicted RBP15.55■□□□□ 0.08
VPS53-218ENST00000575207 FAM172AQ8WUF8 416 aa15.55■□□□□ 0.08
VPS53-218ENST00000575207 LYSMD1Q96S90 227 aa15.55■□□□□ 0.08
VPS53-218ENST00000575207 KIR3DX1Q9H7L2 352 aa15.55■□□□□ 0.08
VPS53-218ENST00000575207 PLEKHF2Q9H8W4 249 aa15.55■□□□□ 0.08
VPS53-218ENST00000575207 DMRT3Q9NQL9 472 aa15.55■□□□□ 0.08
VPS53-218ENST00000575207 HRH3Q9Y5N1 445 aa15.55■□□□□ 0.08
VPS53-218ENST00000575207 SVEP1Q4LDE5 3571 aa15.55■□□□□ 0.08
VPS53-218ENST00000575207 TTI1O43156 1089 aa15.54■□□□□ 0.08
VPS53-218ENST00000575207 CDK14O94921 469 aa15.54■□□□□ 0.08
VPS53-218ENST00000575207 PEX11BO96011 259 aa15.54■□□□□ 0.08
VPS53-218ENST00000575207 PVRP15151 417 aa15.54■□□□□ 0.08
VPS53-218ENST00000575207 ITGAXP20702 1163 aa15.54■□□□□ 0.08
VPS53-218ENST00000575207 HTR7P34969 479 aa15.54■□□□□ 0.08
VPS53-218ENST00000575207 KIR2DL3P43628 341 aa15.54■□□□□ 0.08
VPS53-218ENST00000575207 GABRA4P48169 554 aa15.54■□□□□ 0.08
VPS53-218ENST00000575207 TLDC1Q6P9B6 456 aa15.54■□□□□ 0.08
VPS53-218ENST00000575207 CAPN12Q6ZSI9 719 aa15.54■□□□□ 0.08
VPS53-218ENST00000575207 MSANTD4Q8NCY6 345 aa15.54■□□□□ 0.08
VPS53-218ENST00000575207 FAM57AQ8TBR7 257 aa15.54■□□□□ 0.08
VPS53-218ENST00000575207 GLYATL1Q969I3 302 aa15.54■□□□□ 0.08
VPS53-218ENST00000575207 Q96MF0 132 aa15.54■□□□□ 0.08
VPS53-218ENST00000575207 FRMD6Q96NE9 622 aa15.54■□□□□ 0.08
VPS53-218ENST00000575207 IMP3Q9NV31 184 aaKnown RBP15.54■□□□□ 0.08
VPS53-218ENST00000575207 PKD2L2Q9NZM6 624 aa15.54■□□□□ 0.08
VPS53-218ENST00000575207 CRIM1Q9NZV1 1036 aa15.54■□□□□ 0.08
VPS53-218ENST00000575207 NXT1Q9UKK6 140 aaKnown RBP15.54■□□□□ 0.08
VPS53-218ENST00000575207 DFFAO00273 331 aa15.53■□□□□ 0.08
VPS53-218ENST00000575207 HCRTR1O43613 425 aa15.53■□□□□ 0.08
VPS53-218ENST00000575207 ACPPP15309 386 aa15.53■□□□□ 0.08
VPS53-218ENST00000575207 CYP11B1P15538 503 aa15.53■□□□□ 0.08
VPS53-218ENST00000575207 HLA-DPA1P20036 260 aa15.53■□□□□ 0.08
VPS53-218ENST00000575207 TTI2Q6NXR4 508 aa15.53■□□□□ 0.08
VPS53-218ENST00000575207 PRSS57Q6UWY2 283 aa15.53■□□□□ 0.08
VPS53-218ENST00000575207 ZNF655Q8N720 491 aaPredicted RBP15.53■□□□□ 0.08
VPS53-218ENST00000575207 SLC20A1Q8WUM9 679 aa15.53■□□□□ 0.08
VPS53-218ENST00000575207 N4BP2L2Q92802 583 aaPredicted RBP15.53■□□□□ 0.08
VPS53-218ENST00000575207 SEC16BQ96JE7 1060 aa15.53■□□□□ 0.08
VPS53-218ENST00000575207 CEP63Q96MT8 703 aa15.53■□□□□ 0.08
VPS53-218ENST00000575207 NAA15Q9BXJ9 866 aaKnown RBP15.53■□□□□ 0.08
VPS53-218ENST00000575207 SOX17Q9H6I2 414 aaPredicted RBP15.53■□□□□ 0.08
VPS53-218ENST00000575207 FAM60AQ9NP50 221 aa15.53■□□□□ 0.08
VPS53-218ENST00000575207 FZD10Q9ULW2 581 aa15.53■□□□□ 0.08
VPS53-218ENST00000575207 PSMD13Q9UNM6 376 aa15.53■□□□□ 0.08
VPS53-218ENST00000575207 FHOD1Q9Y613 1164 aa15.53■□□□□ 0.08
VPS53-218ENST00000575207 MTX2O75431 263 aa15.52■□□□□ 0.08
VPS53-218ENST00000575207 CTSBP07858 339 aa15.52■□□□□ 0.08
VPS53-218ENST00000575207 GCGRP47871 477 aa15.52■□□□□ 0.08
VPS53-218ENST00000575207 TPI1P60174 286 aa15.52■□□□□ 0.08
VPS53-218ENST00000575207 MAXP61244 160 aa15.52■□□□□ 0.08
VPS53-218ENST00000575207 COBLL1Q53SF7 1204 aa15.52■□□□□ 0.08
VPS53-218ENST00000575207 PDPK2PQ6A1A2 396 aa15.52■□□□□ 0.08
VPS53-218ENST00000575207 TRIM65Q6PJ69 517 aa15.52■□□□□ 0.08
VPS53-218ENST00000575207 RIPOR1Q6ZS17 1223 aa15.52■□□□□ 0.08
VPS53-218ENST00000575207 SHISA6Q6ZSJ9 500 aa15.52■□□□□ 0.08
VPS53-218ENST00000575207 LRRC75A-AS1Q8N1F1 130 aa15.52■□□□□ 0.08
VPS53-218ENST00000575207 OR4E2Q8NGC2 313 aa15.52■□□□□ 0.08
VPS53-218ENST00000575207 JOSD2Q8TAC2 188 aa15.52■□□□□ 0.08
VPS53-218ENST00000575207 ZSCAN5AQ9BUG6 496 aa15.52■□□□□ 0.08
VPS53-218ENST00000575207 SARGQ9BW04 601 aa15.52■□□□□ 0.08
VPS53-218ENST00000575207 CHRNA10Q9GZZ6 450 aa15.52■□□□□ 0.08
VPS53-218ENST00000575207 KLHL25Q9H0H3 589 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms