RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 ADGRD1Q6QNK2 874 aa10.39□□□□□ -0.75
LITAF-216ENST00000574848 CRTC3Q6UUV7 619 aa10.39□□□□□ -0.75
LITAF-216ENST00000574848 PCSK4Q6UW60 755 aa10.39□□□□□ -0.75
LITAF-216ENST00000574848 ABRAXAS1Q6UWZ7 409 aa10.39□□□□□ -0.75
LITAF-216ENST00000574848 MICALCLQ6ZW33 695 aa10.39□□□□□ -0.75
LITAF-216ENST00000574848 USP53Q70EK8 1073 aa10.39□□□□□ -0.75
LITAF-216ENST00000574848 TRABD2AQ86V40 505 aa10.39□□□□□ -0.75
LITAF-216ENST00000574848 CAND1Q86VP6 1230 aaKnown RBP10.39□□□□□ -0.75
LITAF-216ENST00000574848 SLC26A11Q86WA9 606 aa10.39□□□□□ -0.75
LITAF-216ENST00000574848 LRRC6Q86X45 466 aa10.39□□□□□ -0.75
LITAF-216ENST00000574848 SRRM1Q8IYB3 904 aaKnown RBP10.39□□□□□ -0.75
LITAF-216ENST00000574848 SLC25A41Q8N5S1 370 aa10.39□□□□□ -0.75
LITAF-216ENST00000574848 BMPERQ8N8U9 685 aa10.39□□□□□ -0.75
LITAF-216ENST00000574848 AGBL5Q8NDL9 886 aa10.39□□□□□ -0.75
LITAF-216ENST00000574848 BRSK1Q8TDC3 778 aa10.39□□□□□ -0.75
LITAF-216ENST00000574848 BLOC1S5Q8TDH9 187 aa10.39□□□□□ -0.75
LITAF-216ENST00000574848 BCAS4Q8TDM0 211 aa10.39□□□□□ -0.75
LITAF-216ENST00000574848 MTBPQ96DY7 904 aa10.39□□□□□ -0.75
LITAF-216ENST00000574848 SLC38A3Q99624 504 aa10.39□□□□□ -0.75
LITAF-216ENST00000574848 DHRS4Q9BTZ2 278 aa10.39□□□□□ -0.75
LITAF-216ENST00000574848 DDA1Q9BW61 102 aa10.39□□□□□ -0.75
LITAF-216ENST00000574848 ZCCHC2Q9C0B9 1178 aaKnown RBP10.39□□□□□ -0.75
LITAF-216ENST00000574848 CCDC134Q9H6E4 229 aa10.39□□□□□ -0.75
LITAF-216ENST00000574848 ARNT2Q9HBZ2 717 aa10.39□□□□□ -0.75
LITAF-216ENST00000574848 BPIFA1Q9NP55 256 aa10.39□□□□□ -0.75
LITAF-216ENST00000574848 KCNK9Q9NPC2 374 aa10.39□□□□□ -0.75
LITAF-216ENST00000574848 KLC4Q9NSK0 619 aa10.39□□□□□ -0.75
LITAF-216ENST00000574848 POT1Q9NUX5 634 aa10.39□□□□□ -0.75
LITAF-216ENST00000574848 BFARQ9NZS9 450 aa10.39□□□□□ -0.75
LITAF-216ENST00000574848 FOXJ2Q9P0K8 574 aa10.39□□□□□ -0.75
LITAF-216ENST00000574848 TMEM9Q9P0T7 183 aa10.39□□□□□ -0.75
LITAF-216ENST00000574848 CPNE7Q9UBL6 633 aa10.39□□□□□ -0.75
LITAF-216ENST00000574848 SLC23A2Q9UGH3 650 aa10.39□□□□□ -0.75
LITAF-216ENST00000574848 ZNF180Q9UJW8 692 aa10.39□□□□□ -0.75
LITAF-216ENST00000574848 PKP3Q9Y446 797 aa10.39□□□□□ -0.75
LITAF-216ENST00000574848 SDK2Q58EX2 2172 aa10.38□□□□□ -0.75
LITAF-216ENST00000574848 GLYATL1P3A0A0U1RQE8 302 aa10.38□□□□□ -0.75
LITAF-216ENST00000574848 TMEM120BA0PK00 339 aa10.38□□□□□ -0.75
LITAF-216ENST00000574848 ERICH4A6NGS2 130 aa10.38□□□□□ -0.75
LITAF-216ENST00000574848 AGAP14A8MT82 685 aa10.38□□□□□ -0.75
LITAF-216ENST00000574848 F5H423 210 aaPredicted RBP10.38□□□□□ -0.75
LITAF-216ENST00000574848 PRPF4O43172 522 aaKnown RBP eCLIP10.38□□□□□ -0.75
LITAF-216ENST00000574848 MTX2O75431 263 aa10.38□□□□□ -0.75
LITAF-216ENST00000574848 BANF1O75531 89 aa10.38□□□□□ -0.75
LITAF-216ENST00000574848 KRT38O76015 456 aa10.38□□□□□ -0.75
LITAF-216ENST00000574848 CDK14O94921 469 aa10.38□□□□□ -0.75
LITAF-216ENST00000574848 FAM107AO95990 144 aa10.38□□□□□ -0.75
LITAF-216ENST00000574848 ANKRD34CP0C6C1 535 aa10.38□□□□□ -0.75
LITAF-216ENST00000574848 FGF3P11487 239 aaPredicted RBP10.38□□□□□ -0.75
LITAF-216ENST00000574848 CCL4P13236 92 aa10.38□□□□□ -0.75
LITAF-216ENST00000574848 NPY2RP49146 381 aa10.38□□□□□ -0.75
LITAF-216ENST00000574848 ARSDP51689 593 aa10.38□□□□□ -0.75
LITAF-216ENST00000574848 TMEM115Q12893 351 aaPredicted RBP10.38□□□□□ -0.75
LITAF-216ENST00000574848 TAF1AQ15573 450 aaPredicted RBP10.38□□□□□ -0.75
LITAF-216ENST00000574848 CHRNA6Q15825 494 aa10.38□□□□□ -0.75
LITAF-216ENST00000574848 SEPT7Q16181 437 aaKnown RBP10.38□□□□□ -0.75
LITAF-216ENST00000574848 SPANXN3Q5MJ09 141 aa10.38□□□□□ -0.75
LITAF-216ENST00000574848 LDLRAP1Q5SW96 308 aa10.38□□□□□ -0.75
LITAF-216ENST00000574848 FAM151BQ6UXP7 276 aa10.38□□□□□ -0.75
LITAF-216ENST00000574848 ARHGAP22Q7Z5H3 698 aa10.38□□□□□ -0.75
LITAF-216ENST00000574848 ZNF761Q86XN6 746 aaPredicted RBP10.38□□□□□ -0.75
LITAF-216ENST00000574848 RBM12BQ8IXT5 1001 aaKnown RBP10.38□□□□□ -0.75
LITAF-216ENST00000574848 DNAAF3Q8N9W5 541 aa10.38□□□□□ -0.75
LITAF-216ENST00000574848 RCBTB1Q8NDN9 531 aa10.38□□□□□ -0.75
LITAF-216ENST00000574848 SLC44A1Q8WWI5 657 aa10.38□□□□□ -0.75
LITAF-216ENST00000574848 TTC9Q92623 222 aa10.38□□□□□ -0.75
LITAF-216ENST00000574848 USP7Q93009 1102 aa10.38□□□□□ -0.75
LITAF-216ENST00000574848 CCNL2Q96S94 520 aaPredicted RBP10.38□□□□□ -0.75
LITAF-216ENST00000574848 FICDQ9BVA6 458 aa10.38□□□□□ -0.75
LITAF-216ENST00000574848 FAM107BQ9H098 131 aa10.38□□□□□ -0.75
LITAF-216ENST00000574848 PRDM8Q9NQV8 689 aa10.38□□□□□ -0.75
LITAF-216ENST00000574848 SCHIP1Q9P0W5 487 aaPredicted RBP10.38□□□□□ -0.75
LITAF-216ENST00000574848 CTNNAL1Q9UBT7 734 aa10.38□□□□□ -0.75
LITAF-216ENST00000574848 KLHL33A6NCF5 533 aa10.37□□□□□ -0.75
LITAF-216ENST00000574848 EBAG9O00559 213 aa10.37□□□□□ -0.75
LITAF-216ENST00000574848 GPR39O43194 453 aa10.37□□□□□ -0.75
LITAF-216ENST00000574848 SNX2O60749 519 aa10.37□□□□□ -0.75
LITAF-216ENST00000574848 AVILO75366 819 aa10.37□□□□□ -0.75
LITAF-216ENST00000574848 ZWINTO95229 277 aa10.37□□□□□ -0.75
LITAF-216ENST00000574848 PRAMEF1O95521 474 aa10.37□□□□□ -0.75
LITAF-216ENST00000574848 C9P02748 559 aa10.37□□□□□ -0.75
LITAF-216ENST00000574848 MT-ND3P03897 115 aa10.37□□□□□ -0.75
LITAF-216ENST00000574848 VCLP18206 1134 aa10.37□□□□□ -0.75
LITAF-216ENST00000574848 LPOP22079 712 aaPredicted RBP10.37□□□□□ -0.75
LITAF-216ENST00000574848 CA5AP35218 305 aa10.37□□□□□ -0.75
LITAF-216ENST00000574848 SLC19A1P41440 591 aa10.37□□□□□ -0.75
LITAF-216ENST00000574848 ZNF140P52738 457 aaPredicted RBP10.37□□□□□ -0.75
LITAF-216ENST00000574848 MAPK10P53779 464 aa10.37□□□□□ -0.75
LITAF-216ENST00000574848 RAB15P59190 212 aa10.37□□□□□ -0.75
LITAF-216ENST00000574848 PDE1BQ01064 536 aa10.37□□□□□ -0.75
LITAF-216ENST00000574848 CDH17Q12864 832 aa10.37□□□□□ -0.75
LITAF-216ENST00000574848 NFATC2Q13469 925 aa10.37□□□□□ -0.75
LITAF-216ENST00000574848 GTF2H3Q13889 308 aa10.37□□□□□ -0.75
LITAF-216ENST00000574848 FRG1Q14331 258 aaKnown RBP10.37□□□□□ -0.75
LITAF-216ENST00000574848 PLA2G4EQ3MJ16 856 aa10.37□□□□□ -0.75
LITAF-216ENST00000574848 GPRC6AQ5T6X5 926 aa10.37□□□□□ -0.75
LITAF-216ENST00000574848 ARHGAP40Q5TG30 622 aa10.37□□□□□ -0.75
LITAF-216ENST00000574848 TMEM164Q5U3C3 297 aa10.37□□□□□ -0.75
LITAF-216ENST00000574848 STEAP4Q687X5 459 aa10.37□□□□□ -0.75
LITAF-216ENST00000574848 KCTD11Q693B1 232 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms