RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 AMD1P17707 334 aa10.77□□□□□ -0.69
CHD3-216ENST00000573936 ITGB6P18564 788 aa10.77□□□□□ -0.69
CHD3-216ENST00000573936 CHRM3P20309 590 aa10.77□□□□□ -0.69
CHD3-216ENST00000573936 AOAHP28039 575 aa10.77□□□□□ -0.69
CHD3-216ENST00000573936 CD1CP29017 333 aa10.77□□□□□ -0.69
CHD3-216ENST00000573936 CCR7P32248 378 aa10.77□□□□□ -0.69
CHD3-216ENST00000573936 LEPRP48357 1165 aaKnown RBP10.77□□□□□ -0.69
CHD3-216ENST00000573936 CARSP49589 748 aaKnown RBP10.77□□□□□ -0.69
CHD3-216ENST00000573936 MGAT5Q09328 741 aa10.77□□□□□ -0.69
CHD3-216ENST00000573936 BOP1Q14137 746 aaKnown RBP10.77□□□□□ -0.69
CHD3-216ENST00000573936 BRD3Q15059 726 aa10.77□□□□□ -0.69
CHD3-216ENST00000573936 AMZ1Q400G9 498 aa10.77□□□□□ -0.69
CHD3-216ENST00000573936 TEDDM1Q5T9Z0 273 aa10.77□□□□□ -0.69
CHD3-216ENST00000573936 UGT3A1Q6NUS8 523 aa10.77□□□□□ -0.69
CHD3-216ENST00000573936 KLHL35Q6PF15 583 aa10.77□□□□□ -0.69
CHD3-216ENST00000573936 ZDHHC24Q6UX98 284 aa10.77□□□□□ -0.69
CHD3-216ENST00000573936 OTOAQ7RTW8 1153 aa10.77□□□□□ -0.69
CHD3-216ENST00000573936 ZNF605Q86T29 641 aa10.77□□□□□ -0.69
CHD3-216ENST00000573936 CCDC25Q86WR0 208 aa10.77□□□□□ -0.69
CHD3-216ENST00000573936 DENND6AQ8IWF6 608 aa10.77□□□□□ -0.69
CHD3-216ENST00000573936 IFT20Q8IY31 132 aa10.77□□□□□ -0.69
CHD3-216ENST00000573936 LILRA3Q8N6C8 439 aaPredicted RBP10.77□□□□□ -0.69
CHD3-216ENST00000573936 DCBLD1Q8N8Z6 715 aa10.77□□□□□ -0.69
CHD3-216ENST00000573936 RMDN2Q96LZ7 410 aa10.77□□□□□ -0.69
CHD3-216ENST00000573936 BIRC8Q96P09 236 aa10.77□□□□□ -0.69
CHD3-216ENST00000573936 FERD3LQ96RJ6 166 aa10.77□□□□□ -0.69
CHD3-216ENST00000573936 FBXO6Q9NRD1 293 aaPredicted RBP10.77□□□□□ -0.69
CHD3-216ENST00000573936 IMP3Q9NV31 184 aaKnown RBP10.77□□□□□ -0.69
CHD3-216ENST00000573936 KLHL42Q9P2K6 505 aa10.77□□□□□ -0.69
CHD3-216ENST00000573936 DMGDHQ9UI17 866 aaKnown RBP10.77□□□□□ -0.69
CHD3-216ENST00000573936 CORO1CQ9ULV4 474 aaPredicted RBP10.77□□□□□ -0.69
CHD3-216ENST00000573936 ARID1BQ8NFD5 2236 aaPredicted RBP10.77□□□□□ -0.69
CHD3-216ENST00000573936 ASXL3Q9C0F0 2248 aa10.77□□□□□ -0.69
CHD3-216ENST00000573936 A0A1W2PQM1 296 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 ESYT3A0FGR9 886 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 IQCF5A8MTL0 148 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 D6RAR5 112 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 CSO75390 466 aaKnown RBP10.76□□□□□ -0.69
CHD3-216ENST00000573936 GPC4O75487 556 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 SPAG6O75602 509 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 UBXN7O94888 489 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 HAUS5O94927 633 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 SLCO2B1O94956 709 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 RPN2P04844 631 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 PDHA2P29803 388 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 MAGEA4P43358 317 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 PREPP48147 710 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 INHBCP55103 352 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 TUBB4BP68371 445 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 HSPA14Q0VDF9 509 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 TARDBPQ13148 414 aaKnown RBP eCLIP10.76□□□□□ -0.69
CHD3-216ENST00000573936 CAMK2BQ13554 666 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 CUL1Q13616 776 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 FASTKD3Q14CZ7 662 aaKnown RBP10.76□□□□□ -0.69
CHD3-216ENST00000573936 TRADDQ15628 312 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 ISXQ2M1V0 245 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 TTLL9Q3SXZ7 439 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 MAP9Q49MG5 647 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 CTSL3PQ5NE16 218 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 WDR74Q6RFH5 385 aaPredicted RBP10.76□□□□□ -0.69
CHD3-216ENST00000573936 XKR5Q6UX68 686 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 C3orf62Q6ZUJ4 267 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 SLC26A11Q86WA9 606 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 TBC1D21Q8IYX1 336 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 UNC5BQ8IZJ1 945 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 KRT222Q8N1A0 295 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 IFT81Q8WYA0 676 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 SLC39A7Q92504 469 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 TFGQ92734 400 aaPredicted RBP10.76□□□□□ -0.69
CHD3-216ENST00000573936 CDKL2Q92772 493 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 KCNJ9Q92806 393 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 WDR83Q9BRX9 315 aaKnown RBP10.76□□□□□ -0.69
CHD3-216ENST00000573936 STRADBQ9C0K7 418 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 ZMYND15Q9H091 742 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 KIR3DX1Q9H7L2 352 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 ZDHHC18Q9NUE0 388 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 MOCS1Q9NZB8 636 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 AKAP7Q9P0M2 348 aaPredicted RBP10.76□□□□□ -0.69
CHD3-216ENST00000573936 ZFATQ9P243 1243 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 POLG2Q9UHN1 485 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 CFAP20Q9Y6A4 193 aaKnown RBP10.76□□□□□ -0.69
CHD3-216ENST00000573936 AK5Q9Y6K8 562 aa10.76□□□□□ -0.69
CHD3-216ENST00000573936 MAST4O15021 2626 aa10.75□□□□□ -0.69
CHD3-216ENST00000573936 AHSGP02765 367 aa10.75□□□□□ -0.69
CHD3-216ENST00000573936 PRB1P04280 392 aa10.75□□□□□ -0.69
CHD3-216ENST00000573936 RHOXF2BP0C7M4 288 aa10.75□□□□□ -0.69
CHD3-216ENST00000573936 ACADLP28330 430 aa10.75□□□□□ -0.69
CHD3-216ENST00000573936 ATP5DP30049 168 aa10.75□□□□□ -0.69
CHD3-216ENST00000573936 CCKBRP32239 447 aa10.75□□□□□ -0.69
CHD3-216ENST00000573936 SKIV2L2P42285 1042 aaKnown RBP10.75□□□□□ -0.69
CHD3-216ENST00000573936 MAPK9P45984 424 aa10.75□□□□□ -0.69
CHD3-216ENST00000573936 MPP1Q00013 466 aa10.75□□□□□ -0.69
CHD3-216ENST00000573936 ZFP36L1Q07352 338 aaKnown RBP10.75□□□□□ -0.69
CHD3-216ENST00000573936 TRA2AQ13595 282 aaKnown RBP eCLIP10.75□□□□□ -0.69
CHD3-216ENST00000573936 GPR18Q14330 331 aa10.75□□□□□ -0.69
CHD3-216ENST00000573936 PLCL1Q15111 1095 aa10.75□□□□□ -0.69
CHD3-216ENST00000573936 ZNF789Q5FWF6 425 aa10.75□□□□□ -0.69
CHD3-216ENST00000573936 TMEM71Q6P5X7 295 aa10.75□□□□□ -0.69
CHD3-216ENST00000573936 TTC23LQ6PF05 361 aa10.75□□□□□ -0.69
CHD3-216ENST00000573936 TRMT10BQ6PF06 316 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms