RNA–Protein interactions for RNA: ENST00000573876.1

NPLOC4-214, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4 BASIC

Gene NPLOC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-214ENST00000573876 TDRPQ86YL5 185 aa12.62□□□□□ -0.39
NPLOC4-214ENST00000573876 CEP97Q8IW35 865 aa12.62□□□□□ -0.39
NPLOC4-214ENST00000573876 CYP4X1Q8N118 509 aa12.62□□□□□ -0.39
NPLOC4-214ENST00000573876 NAGSQ8N159 534 aa12.62□□□□□ -0.39
NPLOC4-214ENST00000573876 SFRP1Q8N474 314 aa12.62□□□□□ -0.39
NPLOC4-214ENST00000573876 ARL14Q8N4G2 192 aa12.62□□□□□ -0.39
NPLOC4-214ENST00000573876 ZBTB2Q8N680 514 aa12.62□□□□□ -0.39
NPLOC4-214ENST00000573876 SLC37A2Q8TED4 501 aa12.62□□□□□ -0.39
NPLOC4-214ENST00000573876 SH3KBP1Q96B97 665 aa12.62□□□□□ -0.39
NPLOC4-214ENST00000573876 CXorf40BQ96DE9 158 aa12.62□□□□□ -0.39
NPLOC4-214ENST00000573876 TSPAN17Q96FV3 270 aa12.62□□□□□ -0.39
NPLOC4-214ENST00000573876 TMEM109Q9BVC6 243 aa12.62□□□□□ -0.39
NPLOC4-214ENST00000573876 WWP1Q9H0M0 922 aa12.62□□□□□ -0.39
NPLOC4-214ENST00000573876 CTNNAL1Q9UBT7 734 aa12.62□□□□□ -0.39
NPLOC4-214ENST00000573876 TRMT6Q9UJA5 497 aaKnown RBP12.62□□□□□ -0.39
NPLOC4-214ENST00000573876 PSMD13Q9UNM6 376 aa12.62□□□□□ -0.39
NPLOC4-214ENST00000573876 APOBEC2Q9Y235 224 aaKnown RBP12.62□□□□□ -0.39
NPLOC4-214ENST00000573876 HEBP2Q9Y5Z4 205 aa12.62□□□□□ -0.39
NPLOC4-214ENST00000573876 UNC13CQ8NB66 2214 aa12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 COL5A1P20908 1838 aaPredicted RBP12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 SPAARA0A1B0GVQ0 90 aa12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 SLC5A10A0PJK1 596 aa12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 A6NCN8 305 aa12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 NUDT21O43809 227 aaKnown RBP12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 CDH16O75309 829 aa12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 GPC4O75487 556 aa12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 EML2O95834 649 aa12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 CDK4P11802 303 aa12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 MYF5P13349 255 aa12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 GLB1P16278 677 aa12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 STMN1P16949 149 aa12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 CD9P21926 228 aa12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 ACP1P24666 158 aa12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 TYK2P29597 1187 aa12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 PREPP48147 710 aa12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 RAB10P61026 200 aa12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 ZNF844Q08AG5 666 aa12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 DNAJC3Q13217 504 aa12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 ILKQ13418 452 aa12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 ZNF460Q14592 562 aa12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 KRT71Q3SY84 523 aa12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 ZNF658BQ4V348 819 aaPredicted RBP12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 PLEKHS1Q5SXH7 462 aa12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 CEP85LQ5SZL2 805 aa12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 GUSBP11Q6P575 273 aa12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 LRIG3Q6UXM1 1119 aa12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 PIM3Q86V86 326 aa12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 C17orf82Q86X59 251 aaPredicted RBP12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 IFI44Q8TCB0 444 aa12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 EEF1AKMT1Q8WVE0 214 aa12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 PATE1Q8WXA2 126 aa12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 C12orf66Q96MD2 445 aa12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 IMP3Q9NV31 184 aaKnown RBP12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 LRIT1Q9P2V4 623 aa12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 CPNE7Q9UBL6 633 aa12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 PCDHGA1Q9Y5H4 931 aa12.61□□□□□ -0.39
NPLOC4-214ENST00000573876 LY6G6EA0A0G2JKS1 128 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 A0A1W2PPM1 405 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 FOXO6A8MYZ6 492 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 PHGDHO43175 533 aaKnown RBP12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 RFPL3O75679 317 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 SLCO2B1O94956 709 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 MT-ND3P03897 115 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 GP1BAP07359 652 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 PNLIPP16233 465 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 XRCC1P18887 633 aaPredicted RBP12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 KRT15P19012 456 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 NDUFS1P28331 727 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 CRABP2P29373 138 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 SLC19A1P41440 591 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 FASLGP48023 281 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 PPM1FP49593 454 aaPredicted RBP12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 ACADVLP49748 655 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 E2F1Q01094 437 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 HHEXQ03014 270 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 ABRQ12979 859 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 CLCA4Q14CN2 919 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 RASA2Q15283 850 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 RPE65Q16518 533 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 ACSBG2Q5FVE4 666 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 PPM1JQ5JR12 505 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 TMEM207Q6UWW9 146 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 XKR5Q6UX68 686 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 CMC1Q7Z7K0 106 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 VRK3Q8IV63 474 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 SFTPA2Q8IWL1 248 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 RBM12BQ8IXT5 1001 aaKnown RBP12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 GIMAP7Q8NHV1 300 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 CD200R1Q8TD46 325 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 ANKRD7Q92527 254 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 CCDC74AQ96AQ1 378 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 MTBPQ96DY7 904 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 RMDN2Q96LZ7 410 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 SLC38A3Q99624 504 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 ABCG4Q9H172 646 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 CENPHQ9H3R5 247 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 SYTL2Q9HCH5 934 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 GPAMQ9HCL2 828 aa12.6□□□□□ -0.39
NPLOC4-214ENST00000573876 POT1Q9NUX5 634 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms