RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 BOP1Q14137 746 aaKnown RBP9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 RPS6KA1Q15418 735 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 CAPRIN2Q6IMN6 1127 aaKnown RBP9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 PWWP2BQ6NUJ5 590 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 FBXO38Q6PIJ6 1188 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 AFTPHQ6ULP2 937 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 SLC13A5Q86YT5 568 aaPredicted RBP9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 PIANPQ8IYJ0 282 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 OR52E1Q8NGJ3 308 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 C9orf43Q8TAL5 461 aaPredicted RBP9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 CT55Q8WUE5 264 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 APOBEC4Q8WW27 367 aaKnown RBP9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 ELMO1Q92556 727 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 TTC1Q99614 292 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 TUBB2BQ9BVA1 445 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 TLR10Q9BXR5 811 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 FRMD8P1Q9BZ68 369 aaPredicted RBP9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 SLC7A5P2Q9GIP4 190 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 TWSG1Q9GZX9 223 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 OR52A5Q9H2C5 316 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 MVB12BQ9H7P6 319 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 ETNK1Q9HBU6 452 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 LZTFL1Q9NQ48 299 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 LHX9Q9NQ69 397 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 RAB6BQ9NRW1 208 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 POMT2Q9UKY4 750 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 POLHQ9Y253 713 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 PIPSLA2A3N6 862 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 CCDC162PA2VCL2 907 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 SLC9B1P1A6NJY1 282 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 TMEM150CB9EJG8 249 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 F8W8V4 182 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 BTN3A1O00481 513 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 LIN7AO14910 233 aaPredicted RBP9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 ARHGAP6O43182 974 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 APRTP07741 180 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 GSTM1P09488 218 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 OR56A5P0C7T3 313 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 ETS1P14921 441 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 PDHA2P29803 388 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 CD151P48509 253 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 CSE1LP55060 971 aaKnown RBP9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 RPS15P62841 145 aaKnown RBP9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 PRAMEP78395 509 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 BASP1P80723 227 aaKnown RBP9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 GSTM4Q03013 218 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 RPA4Q13156 261 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 ITIH4Q14624 930 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 OASLQ15646 514 aaKnown RBP9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 FASTKD1Q53R41 847 aaKnown RBP9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 GSTA5Q7RTV2 222 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 BPHLQ86WA6 291 aaPredicted RBP9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 CARFQ8N187 725 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 D2HGDHQ8N465 521 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 PHC3Q8NDX5 983 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 PPHLN1Q8NEY8 458 aaKnown RBP9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 OR6P1Q8NGX9 317 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 TFGQ92734 400 aaPredicted RBP9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 N4BP2L2Q92802 583 aaPredicted RBP9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 MR1Q95460 341 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 HDAC10Q969S8 669 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 PPM1MQ96MI6 270 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 FCRL4Q96PJ5 515 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 KLHL25Q9H0H3 589 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 ACTL8Q9H568 366 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 CLMPQ9H6B4 373 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 XKR8Q9H6D3 395 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 ZNF71Q9NQZ8 489 aaPredicted RBP9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 C1GALT1Q9NS00 363 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 KCND1Q9NSA2 647 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 SEMA5BQ9P283 1151 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 PAK5Q9P286 719 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 TUBD1Q9UJT1 453 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 ANAPC5Q9UJX4 755 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 ASF1AQ9Y294 204 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 BTRCQ9Y297 605 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 MAN2B2Q9Y2E5 1009 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 TDRKHQ9Y2W6 561 aaKnown RBP9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 MYO18BQ8IUG5 2567 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 FER1L5A0AVI2 2057 aa9.38□□□□□ -0.91
NPLOC4-212ENST00000573328 GOLGA6L3A6NEY3 463 aa9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 MROH6A6NGR9 719 aa9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 C2orf74A8MZ97 194 aa9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 C21orf140B9A014 251 aa9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 NRDCO43847 1150 aa9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 KDM1AO60341 852 aa9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 CREG1O75629 220 aa9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 GOT2P00505 430 aaKnown RBP9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 KLK3P07288 261 aaPredicted RBP9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 CCDC175P0C221 793 aa9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 CYP2A7P20853 494 aa9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 ADRA1DP25100 572 aa9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 FOXN2P32314 431 aa9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 PPARGP37231 505 aaPredicted RBP9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 RPS18P62269 152 aaKnown RBP9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 KCNC4Q03721 635 aa9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 CRTC2Q53ET0 693 aaPredicted RBP9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 LACTB2Q53H82 288 aaPredicted RBP9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 TSTD2Q5T7W7 516 aa9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 MEI1Q5TIA1 1274 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms