RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 ZBTB8OSQ8IWT0 167 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 HACE1Q8IYU2 909 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 PARP16Q8N5Y8 322 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 PLD5Q8N7P1 536 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 C4orf32Q8N8J7 132 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 RNF149Q8NC42 400 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 CNNM3Q8NE01 707 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 GJC3Q8NFK1 279 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 ZCCHC10Q8TBK6 192 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 NOC3LQ8WTT2 800 aaKnown RBP4.04□□□□□ -1.76
NUP88-202ENST00000570937 PRPF31Q8WWY3 499 aaKnown RBP4.04□□□□□ -1.76
NUP88-202ENST00000570937 KIFAP3Q92845 792 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 TMEM143Q96AN5 459 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 ZBTB10Q96DT7 871 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 CALML4Q96GE6 196 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 IFT74Q96LB3 600 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 ZNF396Q96N95 335 aaPredicted RBP4.04□□□□□ -1.76
NUP88-202ENST00000570937 TGS1Q96RS0 853 aaKnown RBP4.04□□□□□ -1.76
NUP88-202ENST00000570937 CDX2Q99626 313 aaPredicted RBP4.04□□□□□ -1.76
NUP88-202ENST00000570937 FUZQ9BT04 418 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 TIPINQ9BVW5 301 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 NFKBIZQ9BYH8 718 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 GPR63Q9BZJ6 419 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 C2orf40Q9H1Z8 148 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 DHX33Q9H6R0 707 aaKnown RBP4.04□□□□□ -1.76
NUP88-202ENST00000570937 C17orf75Q9HAS0 396 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 SMYD2Q9NRG4 433 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 RGS18Q9NS28 235 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 DDX19AQ9NUU7 478 aaKnown RBP4.04□□□□□ -1.76
NUP88-202ENST00000570937 TMEM161AQ9NX61 479 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 MTMR10Q9NXD2 777 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 KCND2Q9NZV8 630 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 CFAP45Q9UL16 551 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 CARD8Q9Y2G2 431 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 NFE2L3Q9Y4A8 694 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 ATP6V1DQ9Y5K8 247 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 NFS1Q9Y697 457 aa4.04□□□□□ -1.76
NUP88-202ENST00000570937 TCF20Q9UGU0 1960 aaKnown RBP4.03□□□□□ -1.76
NUP88-202ENST00000570937 LAMA3Q16787 3333 aa4.03□□□□□ -1.76
NUP88-202ENST00000570937 TMEM150BA6NC51 233 aa4.03□□□□□ -1.76
NUP88-202ENST00000570937 H0YCG3 227 aa4.03□□□□□ -1.76
NUP88-202ENST00000570937 HSPA12AO43301 675 aa4.03□□□□□ -1.76
NUP88-202ENST00000570937 KLK8O60259 260 aa4.03□□□□□ -1.76
NUP88-202ENST00000570937 RB1P06400 928 aa4.03□□□□□ -1.76
NUP88-202ENST00000570937 HEXAP06865 529 aa4.03□□□□□ -1.76
NUP88-202ENST00000570937 MYOGP15173 224 aa4.03□□□□□ -1.76
NUP88-202ENST00000570937 CYP11B2P19099 503 aa4.03□□□□□ -1.76
NUP88-202ENST00000570937 AXLP30530 894 aa4.03□□□□□ -1.76
NUP88-202ENST00000570937 ABCD1P33897 745 aa4.03□□□□□ -1.76
NUP88-202ENST00000570937 ARL2P36404 184 aa4.03□□□□□ -1.76
NUP88-202ENST00000570937 CDH15P55291 814 aa4.03□□□□□ -1.76
NUP88-202ENST00000570937 HDAC4P56524 1084 aa4.03□□□□□ -1.76
NUP88-202ENST00000570937 KRTAP10-7P60409 375 aaPredicted RBP4.03□□□□□ -1.76
NUP88-202ENST00000570937 ERVFC1-1P60608 527 aa4.03□□□□□ -1.76
NUP88-202ENST00000570937 DEFB103AP81534 67 aa4.03□□□□□ -1.76
NUP88-202ENST00000570937 EEF1A2Q05639 463 aaKnown RBP4.03□□□□□ -1.76
NUP88-202ENST00000570937 MYBPHQ13203 477 aa4.03□□□□□ -1.76
NUP88-202ENST00000570937 ZRSR1Q15695 479 aaKnown RBP4.03□□□□□ -1.76
NUP88-202ENST00000570937 ZRSR2Q15696 482 aaKnown RBP4.03□□□□□ -1.76
NUP88-202ENST00000570937 NFIL3Q16649 462 aa4.03□□□□□ -1.76
NUP88-202ENST00000570937 MAPK6Q16659 721 aa4.03□□□□□ -1.76
NUP88-202ENST00000570937 SETMARQ53H47 684 aaPredicted RBP4.03□□□□□ -1.76
NUP88-202ENST00000570937 PPP6R3Q5H9R7 873 aaPredicted RBP4.03□□□□□ -1.76
NUP88-202ENST00000570937 SPOUT1Q5T280 376 aaKnown RBP4.03□□□□□ -1.76
NUP88-202ENST00000570937 ATL3Q6DD88 541 aa4.03□□□□□ -1.76
NUP88-202ENST00000570937 TWF2Q6IBS0 349 aaKnown RBP4.03□□□□□ -1.76
NUP88-202ENST00000570937 CES5AQ6NT32 575 aa4.03□□□□□ -1.76
NUP88-202ENST00000570937 NOTUMQ6P988 496 aa4.03□□□□□ -1.76
NUP88-202ENST00000570937 Q7L0L9 218 aa4.03□□□□□ -1.76
NUP88-202ENST00000570937 SHFQ7M4L6 423 aa4.03□□□□□ -1.76
NUP88-202ENST00000570937 PGBD5Q8N414 524 aa4.03□□□□□ -1.76
NUP88-202ENST00000570937 LILRB1Q8NHL6 650 aaPredicted RBP4.03□□□□□ -1.76
NUP88-202ENST00000570937 ARNTL2Q8WYA1 636 aa4.03□□□□□ -1.76
NUP88-202ENST00000570937 USP13Q92995 863 aaPredicted RBP4.03□□□□□ -1.76
NUP88-202ENST00000570937 CCDC51Q96ER9 411 aa4.03□□□□□ -1.76
NUP88-202ENST00000570937 MRPL9Q9BYD2 267 aaKnown RBP4.03□□□□□ -1.76
NUP88-202ENST00000570937 TRIM6Q9C030 488 aaPredicted RBP4.03□□□□□ -1.76
NUP88-202ENST00000570937 TTYH1Q9H313 450 aaPredicted RBP4.03□□□□□ -1.76
NUP88-202ENST00000570937 UBN1Q9NPG3 1134 aa4.03□□□□□ -1.76
NUP88-202ENST00000570937 SNTG1Q9NSN8 517 aa4.03□□□□□ -1.76
NUP88-202ENST00000570937 WRAP73Q9P2S5 460 aaPredicted RBP4.03□□□□□ -1.76
NUP88-202ENST00000570937 STK39Q9UEW8 545 aa4.03□□□□□ -1.76
NUP88-202ENST00000570937 ADGRA3Q8IWK6 1321 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 TRIOBPQ9H2D6 2365 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 FSD2A1L4K1 749 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 LRRIQ4A6NIV6 560 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 CCDC169A6NNP5 214 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 K7ERI5 159 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 NCAM2O15394 837 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 HOXC11O43248 304 aaPredicted RBP4.02□□□□□ -1.77
NUP88-202ENST00000570937 USO1O60763 962 aaKnown RBP4.02□□□□□ -1.77
NUP88-202ENST00000570937 MED24O75448 989 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 MTA2O94776 668 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 DDIT3P35638 169 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 NAMPTP43490 491 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 COMPP49747 757 aaPredicted RBP4.02□□□□□ -1.77
NUP88-202ENST00000570937 PEX5P50542 639 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 PTENP60484 403 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 CEBPZQ03701 1054 aaKnown RBP4.02□□□□□ -1.77
NUP88-202ENST00000570937 ILF3Q12906 894 aaKnown RBP eCLIP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms