RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 BECN1Q14457 450 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 BOLA3Q53S33 107 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 TCP11X2Q5H9J9 407 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 FAM182AQ5T1J6 154 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 IRAK1BP1Q5VVH5 260 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 TXNRD3NBQ6F5E7 133 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 TIGD7Q6NT04 549 aaPredicted RBP10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 TMEM220Q6QAJ8 160 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 KIRREL2Q6UWL6 708 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 ACBD4Q8NC06 268 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 PROKR1Q8TCW9 393 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 ADAMTS18Q8TE60 1221 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 TEKT4Q8WW24 435 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 FATE1Q969F0 183 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 NACC2Q96BF6 587 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 THOC3Q96J01 351 aaKnown RBP10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 TTC25Q96NG3 672 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 TRIB3Q96RU7 358 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 LMF1Q96S06 567 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 NDC1Q9BTX1 674 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 AP1M1Q9BXS5 423 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 GPR63Q9BZJ6 419 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 PCDH18Q9HCL0 1135 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 FAM60AQ9NP50 221 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 BPIFA1Q9NP55 256 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 SLC22A11Q9NSA0 550 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 SAMSN1Q9NSI8 373 aaKnown RBP10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 SEC14L3Q9UDX4 400 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 HS3ST3B1Q9Y662 390 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 DNMT3AQ9Y6K1 912 aaPredicted RBP10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 AP1M2Q9Y6Q5 423 aa10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 INTS1Q8N201 2190 aaKnown RBP10.08□□□□□ -0.8
CTDNEP1-202ENST00000570380 TMCO5BA8MYB1 307 aa10.07□□□□□ -0.8
CTDNEP1-202ENST00000570380 BTN3A3O00478 584 aa10.07□□□□□ -0.8
CTDNEP1-202ENST00000570380 BTN3A1O00481 513 aa10.07□□□□□ -0.8
CTDNEP1-202ENST00000570380 MAP3K7O43318 606 aa10.07□□□□□ -0.8
CTDNEP1-202ENST00000570380 WISP2O76076 250 aa10.07□□□□□ -0.8
CTDNEP1-202ENST00000570380 PCK1P35558 622 aa10.07□□□□□ -0.8
CTDNEP1-202ENST00000570380 SMSP52788 366 aa10.07□□□□□ -0.8
CTDNEP1-202ENST00000570380 CSNK1G2P78368 415 aa10.07□□□□□ -0.8
CTDNEP1-202ENST00000570380 MMRN1Q13201 1228 aa10.07□□□□□ -0.8
CTDNEP1-202ENST00000570380 IFI16Q16666 785 aaKnown RBP10.07□□□□□ -0.8
CTDNEP1-202ENST00000570380 DEFB110Q30KQ9 67 aa10.07□□□□□ -0.8
CTDNEP1-202ENST00000570380 NKAIN1Q4KMZ8 207 aa10.07□□□□□ -0.8
CTDNEP1-202ENST00000570380 BEND7Q8N7W2 519 aaPredicted RBP10.07□□□□□ -0.8
CTDNEP1-202ENST00000570380 TSGA13Q96PP4 275 aa10.07□□□□□ -0.8
CTDNEP1-202ENST00000570380 SRMSQ9H3Y6 488 aa10.07□□□□□ -0.8
CTDNEP1-202ENST00000570380 GSX1Q9H4S2 264 aaPredicted RBP10.07□□□□□ -0.8
CTDNEP1-202ENST00000570380 PLA2G3Q9NZ20 509 aa10.07□□□□□ -0.8
CTDNEP1-202ENST00000570380 CDC23Q9UJX2 597 aa10.07□□□□□ -0.8
CTDNEP1-202ENST00000570380 PCDHGB6Q9Y5F9 930 aa10.07□□□□□ -0.8
CTDNEP1-202ENST00000570380 COLEC10Q9Y6Z7 277 aa10.07□□□□□ -0.8
CTDNEP1-202ENST00000570380 ABCA4P78363 2273 aa10.07□□□□□ -0.8
CTDNEP1-202ENST00000570380 RTTNQ86VV8 2226 aa10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 GPR39O43194 453 aa10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 UGT1A9O60656 530 aa10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 CD48P09326 243 aa10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 ESRRAP11474 423 aaPredicted RBP10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 UGT1A6P19224 532 aa10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 UGT1A1P22309 533 aa10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 UGT1A4P22310 534 aa10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 NDUFS1P28331 727 aa10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 GABRA4P48169 554 aa10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 TNFSF10P50591 281 aa10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 ARG2P78540 354 aa10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 PAFAH1B3Q15102 231 aaKnown RBP10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 INAQ16352 499 aa10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 C3AR1Q16581 482 aa10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 NCBP2-AS2Q69YL0 99 aa10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 FAAH2Q6GMR7 532 aa10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 MEX3BQ6ZN04 569 aaKnown RBP10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 TGIF2LYQ8IUE0 185 aa10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 ZNF655Q8N720 491 aaPredicted RBP10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 CNTD1Q8N815 330 aa10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 ACVR1CQ8NER5 493 aa10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 CPLX3Q8WVH0 158 aa10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 LCN9Q8WX39 176 aa10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 RMDN2Q96LZ7 410 aa10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 TREX2Q9BQ50 279 aaPredicted RBP10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 TMEM121Q9BTD3 319 aa10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 XPO4Q9C0E2 1151 aaKnown RBP10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 DEF6Q9H4E7 631 aa10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 UGT1A7Q9HAW7 530 aa10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 UGT1A10Q9HAW8 530 aa10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 UGT1A8Q9HAW9 530 aa10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 HAUS2Q9NVX0 235 aa10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 ABI3Q9P2A4 366 aa10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 FAM8A1Q9UBU6 413 aa10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 TINAGQ9UJW2 476 aa10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 ACSL5Q9ULC5 683 aa10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 SPO11Q9Y5K1 396 aa10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 VPS13CQ709C8 3753 aa10.06□□□□□ -0.8
CTDNEP1-202ENST00000570380 AKAP6Q13023 2319 aa10.05□□□□□ -0.8
CTDNEP1-202ENST00000570380 TRAV17A0A0B4J275 112 aa10.05□□□□□ -0.8
CTDNEP1-202ENST00000570380 MGAT4DA6NG13 374 aa10.05□□□□□ -0.8
CTDNEP1-202ENST00000570380 ZSCAN9O15535 394 aaPredicted RBP10.05□□□□□ -0.8
CTDNEP1-202ENST00000570380 SLC19A2O60779 497 aa10.05□□□□□ -0.8
CTDNEP1-202ENST00000570380 MT-CYBP00156 380 aaPredicted RBP10.05□□□□□ -0.8
CTDNEP1-202ENST00000570380 SLC35G4P0C7Q5 338 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms