RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 NUDT17P0C025 328 aa14.16□□□□□ -0.14
COMMD4-225ENST00000569245 FGF3P11487 239 aaPredicted RBP14.16□□□□□ -0.14
COMMD4-225ENST00000569245 UCNP55089 124 aa14.16□□□□□ -0.14
COMMD4-225ENST00000569245 TMPRSS3P57727 454 aa14.16□□□□□ -0.14
COMMD4-225ENST00000569245 CACNG1Q06432 222 aa14.16□□□□□ -0.14
COMMD4-225ENST00000569245 GPR18Q14330 331 aa14.16□□□□□ -0.14
COMMD4-225ENST00000569245 FRG1Q14331 258 aaKnown RBP14.16□□□□□ -0.14
COMMD4-225ENST00000569245 SLC29A2Q14542 456 aa14.16□□□□□ -0.14
COMMD4-225ENST00000569245 RPE65Q16518 533 aa14.16□□□□□ -0.14
COMMD4-225ENST00000569245 BCL7AQ4VC05 210 aa14.16□□□□□ -0.14
COMMD4-225ENST00000569245 SPANXN3Q5MJ09 141 aa14.16□□□□□ -0.14
COMMD4-225ENST00000569245 METRNLQ641Q3 311 aa14.16□□□□□ -0.14
COMMD4-225ENST00000569245 CASC4Q6P4E1 433 aa14.16□□□□□ -0.14
COMMD4-225ENST00000569245 UNC5AQ6ZN44 842 aa14.16□□□□□ -0.14
COMMD4-225ENST00000569245 CYS1Q717R9 158 aa14.16□□□□□ -0.14
COMMD4-225ENST00000569245 SERPINA9Q86WD7 417 aa14.16□□□□□ -0.14
COMMD4-225ENST00000569245 CFAP206Q8IYR0 622 aa14.16□□□□□ -0.14
COMMD4-225ENST00000569245 IQCKQ8N0W5 287 aa14.16□□□□□ -0.14
COMMD4-225ENST00000569245 OR2L2Q8NH16 312 aa14.16□□□□□ -0.14
COMMD4-225ENST00000569245 PEX13Q92968 403 aa14.16□□□□□ -0.14
COMMD4-225ENST00000569245 TGM7Q96PF1 710 aa14.16□□□□□ -0.14
COMMD4-225ENST00000569245 TAAR9Q96RI9 348 aa14.16□□□□□ -0.14
COMMD4-225ENST00000569245 WWP1Q9H0M0 922 aa14.16□□□□□ -0.14
COMMD4-225ENST00000569245 PLAC1Q9HBJ0 212 aa14.16□□□□□ -0.14
COMMD4-225ENST00000569245 CPNE5Q9HCH3 593 aa14.16□□□□□ -0.14
COMMD4-225ENST00000569245 CHRAC1Q9NRG0 131 aa14.16□□□□□ -0.14
COMMD4-225ENST00000569245 IMP3Q9NV31 184 aaKnown RBP14.16□□□□□ -0.14
COMMD4-225ENST00000569245 SLC39A1Q9NY26 324 aa14.16□□□□□ -0.14
COMMD4-225ENST00000569245 ZDHHC3Q9NYG2 299 aa14.16□□□□□ -0.14
COMMD4-225ENST00000569245 ACSL5Q9ULC5 683 aa14.16□□□□□ -0.14
COMMD4-225ENST00000569245 PCDHB11Q9Y5F2 797 aa14.16□□□□□ -0.14
COMMD4-225ENST00000569245 COL27A1Q8IZC6 1860 aaPredicted RBP14.16□□□□□ -0.14
COMMD4-225ENST00000569245 AGAP14A8MT82 685 aa14.15□□□□□ -0.14
COMMD4-225ENST00000569245 C9orf172C9J069 976 aa14.15□□□□□ -0.14
COMMD4-225ENST00000569245 H7C0S8 307 aa14.15□□□□□ -0.14
COMMD4-225ENST00000569245 MAP2K7O14733 419 aa14.15□□□□□ -0.14
COMMD4-225ENST00000569245 ACSL3O95573 720 aa14.15□□□□□ -0.14
COMMD4-225ENST00000569245 SLC35G4P0C7Q5 338 aa14.15□□□□□ -0.14
COMMD4-225ENST00000569245 PRSS56P0CW18 603 aa14.15□□□□□ -0.14
COMMD4-225ENST00000569245 PSMA3P25788 255 aa14.15□□□□□ -0.14
COMMD4-225ENST00000569245 ACRV1P26436 265 aa14.15□□□□□ -0.14
COMMD4-225ENST00000569245 SSTR1P30872 391 aa14.15□□□□□ -0.14
COMMD4-225ENST00000569245 PHBP35232 272 aa14.15□□□□□ -0.14
COMMD4-225ENST00000569245 CLN3Q13286 438 aa14.15□□□□□ -0.14
COMMD4-225ENST00000569245 KRT33BQ14525 404 aa14.15□□□□□ -0.14
COMMD4-225ENST00000569245 PLCL1Q15111 1095 aa14.15□□□□□ -0.14
COMMD4-225ENST00000569245 ANKRD20A4Q4UJ75 823 aa14.15□□□□□ -0.14
COMMD4-225ENST00000569245 UBAP2Q5T6F2 1119 aaKnown RBP14.15□□□□□ -0.14
COMMD4-225ENST00000569245 C3orf62Q6ZUJ4 267 aa14.15□□□□□ -0.14
COMMD4-225ENST00000569245 ZFAND4Q86XD8 727 aa14.15□□□□□ -0.14
COMMD4-225ENST00000569245 GSDMBQ8TAX9 411 aa14.15□□□□□ -0.14
COMMD4-225ENST00000569245 CFAP36Q96G28 342 aa14.15□□□□□ -0.14
COMMD4-225ENST00000569245 PRORYQ9H606 182 aa14.15□□□□□ -0.14
COMMD4-225ENST00000569245 VPS37BQ9H9H4 285 aa14.15□□□□□ -0.14
COMMD4-225ENST00000569245 TREX1Q9NSU2 369 aa14.15□□□□□ -0.14
COMMD4-225ENST00000569245 ZNF446Q9NWS9 450 aa14.15□□□□□ -0.14
COMMD4-225ENST00000569245 OCIAD1Q9NX40 245 aa14.15□□□□□ -0.14
COMMD4-225ENST00000569245 FOXJ2Q9P0K8 574 aa14.15□□□□□ -0.14
COMMD4-225ENST00000569245 PDP2Q9P2J9 529 aa14.15□□□□□ -0.14
COMMD4-225ENST00000569245 CFAP20Q9Y6A4 193 aaKnown RBP14.15□□□□□ -0.14
COMMD4-225ENST00000569245 RPS6KL1Q9Y6S9 549 aa14.15□□□□□ -0.14
COMMD4-225ENST00000569245 FAM169AQ9Y6X4 670 aa14.15□□□□□ -0.14
COMMD4-225ENST00000569245 FAM208BQ5VWN6 2430 aa14.15□□□□□ -0.14
COMMD4-225ENST00000569245 A0A087WUV0 522 aaPredicted RBP14.14□□□□□ -0.15
COMMD4-225ENST00000569245 ZCWPW2A0A1B0GU75 182 aa14.14□□□□□ -0.15
COMMD4-225ENST00000569245 CCDC162PA2VCL2 907 aa14.14□□□□□ -0.15
COMMD4-225ENST00000569245 OR51F1A6NGY5 319 aa14.14□□□□□ -0.15
COMMD4-225ENST00000569245 CAPN5O15484 640 aaPredicted RBP14.14□□□□□ -0.15
COMMD4-225ENST00000569245 RASSF9O75901 435 aa14.14□□□□□ -0.15
COMMD4-225ENST00000569245 MTHFD1P11586 935 aaKnown RBP14.14□□□□□ -0.15
COMMD4-225ENST00000569245 PRLHRP49683 370 aa14.14□□□□□ -0.15
COMMD4-225ENST00000569245 ARSDP51689 593 aa14.14□□□□□ -0.15
COMMD4-225ENST00000569245 ACVR1Q04771 509 aa14.14□□□□□ -0.15
COMMD4-225ENST00000569245 CRYMQ14894 314 aa14.14□□□□□ -0.15
COMMD4-225ENST00000569245 TGIF1Q15583 401 aa14.14□□□□□ -0.15
COMMD4-225ENST00000569245 DCAF12Q5T6F0 453 aa14.14□□□□□ -0.15
COMMD4-225ENST00000569245 TSTD2Q5T7W7 516 aa14.14□□□□□ -0.15
COMMD4-225ENST00000569245 ARHGAP40Q5TG30 622 aa14.14□□□□□ -0.15
COMMD4-225ENST00000569245 ZNF449Q6P9G9 518 aa14.14□□□□□ -0.15
COMMD4-225ENST00000569245 MICALCLQ6ZW33 695 aa14.14□□□□□ -0.15
COMMD4-225ENST00000569245 GPR155Q7Z3F1 870 aa14.14□□□□□ -0.15
COMMD4-225ENST00000569245 PIANPQ8IYJ0 282 aa14.14□□□□□ -0.15
COMMD4-225ENST00000569245 CLDN19Q8N6F1 224 aa14.14□□□□□ -0.15
COMMD4-225ENST00000569245 OR6P1Q8NGX9 317 aa14.14□□□□□ -0.15
COMMD4-225ENST00000569245 JPH3Q8WXH2 748 aaPredicted RBP14.14□□□□□ -0.15
COMMD4-225ENST00000569245 HDAC10Q969S8 669 aa14.14□□□□□ -0.15
COMMD4-225ENST00000569245 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.14□□□□□ -0.15
COMMD4-225ENST00000569245 ZNF669Q96BR6 464 aaPredicted RBP14.14□□□□□ -0.15
COMMD4-225ENST00000569245 MFSD3Q96ES6 412 aa14.14□□□□□ -0.15
COMMD4-225ENST00000569245 LINC00615Q96LM1 132 aaPredicted RBP14.14□□□□□ -0.15
COMMD4-225ENST00000569245 C12orf66Q96MD2 445 aa14.14□□□□□ -0.15
COMMD4-225ENST00000569245 TTC1Q99614 292 aa14.14□□□□□ -0.15
COMMD4-225ENST00000569245 TRIM56Q9BRZ2 755 aaKnown RBP14.14□□□□□ -0.15
COMMD4-225ENST00000569245 CCM2Q9BSQ5 444 aa14.14□□□□□ -0.15
COMMD4-225ENST00000569245 ASPSCR1Q9BZE9 553 aa14.14□□□□□ -0.15
COMMD4-225ENST00000569245 MOCS1Q9NZB8 636 aa14.14□□□□□ -0.15
COMMD4-225ENST00000569245 OGFRQ9NZT2 677 aa14.14□□□□□ -0.15
COMMD4-225ENST00000569245 KIF26BQ2KJY2 2108 aa14.14□□□□□ -0.15
COMMD4-225ENST00000569245 ADAMTS20P59510 1910 aa14.13□□□□□ -0.15
COMMD4-225ENST00000569245 SCN8AQ9UQD0 1980 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms