RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 TEX44Q53QW1 395 aa11.43□□□□□ -0.58
GTF3C1-209ENST00000568569 SLC9A4Q6AI14 798 aa11.43□□□□□ -0.58
GTF3C1-209ENST00000568569 RHBDD2Q6NTF9 364 aa11.43□□□□□ -0.58
GTF3C1-209ENST00000568569 CDHR3Q6ZTQ4 885 aa11.43□□□□□ -0.58
GTF3C1-209ENST00000568569 GLT6D1Q7Z4J2 308 aa11.43□□□□□ -0.58
GTF3C1-209ENST00000568569 PTERQ96BW5 349 aa11.43□□□□□ -0.58
GTF3C1-209ENST00000568569 LINC00615Q96LM1 132 aaPredicted RBP11.43□□□□□ -0.58
GTF3C1-209ENST00000568569 TRAPPC9Q96Q05 1148 aa11.43□□□□□ -0.58
GTF3C1-209ENST00000568569 CCM2Q9BSQ5 444 aa11.43□□□□□ -0.58
GTF3C1-209ENST00000568569 ATP13A2Q9NQ11 1180 aa11.43□□□□□ -0.58
GTF3C1-209ENST00000568569 UBP1Q9NZI7 540 aa11.43□□□□□ -0.58
GTF3C1-209ENST00000568569 IFT80Q9P2H3 777 aaPredicted RBP11.43□□□□□ -0.58
GTF3C1-209ENST00000568569 FAM153AQ9UHL3 310 aa11.43□□□□□ -0.58
GTF3C1-209ENST00000568569 CROCCQ5TZA2 2017 aa11.43□□□□□ -0.58
GTF3C1-209ENST00000568569 CCDC168Q8NDH2 2452 aa11.43□□□□□ -0.58
GTF3C1-209ENST00000568569 CNTRLQ7Z7A1 2325 aa11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 A0A1B0GUH1 482 aa11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 A0A1W2PQJ5 194 aa11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 LRRD1A4D1F6 860 aa11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 AGPSO00116 658 aa11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 BTN3A3O00478 584 aa11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 BTN3A1O00481 513 aa11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 GAPDHSO14556 408 aaPredicted RBP11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 APOL1O14791 398 aa11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 OR2B3O76000 313 aa11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 PRAMEF1O95521 474 aa11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 POLBP06746 335 aa11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 STSP08842 583 aa11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 CBSLP0DN79 551 aa11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 PVRP15151 417 aa11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 CBSP35520 551 aa11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 TSFMP43897 325 aaKnown RBP11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 WNT3AP56704 352 aa11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 DCDP81605 110 aaKnown RBP11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 HIF1AQ16665 826 aa11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 ZXDCQ2QGD7 858 aaPredicted RBP11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 SIRPB2Q5JXA9 342 aa11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 C1orf189Q5VU69 101 aa11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 ALKBH5Q6P6C2 394 aaKnown RBP11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 PPP1R32Q7Z5V6 425 aa11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 HM13Q8TCT9 377 aa11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 ZNF398Q8TD17 642 aa11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 BLOC1S5Q8TDH9 187 aa11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 GRHL3Q8TE85 626 aa11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 FAR1Q8WVX9 515 aa11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 TEKT5Q96M29 485 aa11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 GBP5Q96PP8 586 aa11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 AP1M1Q9BXS5 423 aa11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 MAK16Q9BXY0 300 aaKnown RBP11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 KLHL25Q9H0H3 589 aa11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 CTTNBP2NLQ9P2B4 639 aa11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 UVRAGQ9P2Y5 699 aa11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 COPG2Q9UBF2 871 aa11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 LCMT1Q9UIC8 334 aa11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 CSAG2Q9Y5P2 127 aa11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 AKAP9Q99996 3911 aa11.42□□□□□ -0.58
GTF3C1-209ENST00000568569 A0A087X0T9 212 aa11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 CCDC66A2RUB6 948 aa11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 C2orf74A8MZ97 194 aa11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 MASP2O00187 686 aa11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 ZSCAN9O15535 394 aaPredicted RBP11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 BUD23O43709 281 aaKnown RBP11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 SERPING1P05155 500 aa11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 FAM228BP0C875 321 aa11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 ZFXP17010 805 aaPredicted RBP11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 PTPN3P26045 913 aa11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 CHRNA4P43681 627 aa11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 CDC16Q13042 620 aa11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 ZNF169Q14929 603 aaPredicted RBP11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 NFKBIBQ15653 356 aa11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 FIGNQ5HY92 759 aa11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 IRAK1BP1Q5VVH5 260 aa11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 B3GNTL1Q67FW5 361 aaPredicted RBP11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 SARM1Q6SZW1 724 aa11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 KDELC1Q6UW63 502 aa11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 IGFL2Q6UWQ7 119 aa11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 NPNTQ6UXI9 565 aa11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 GDF7Q7Z4P5 450 aa11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 DAAM2Q86T65 1068 aa11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 ZC3H18Q86VM9 953 aaKnown RBP11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 FJX1Q86VR8 437 aa11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 HOOK3Q86VS8 718 aa11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 AMIGO1Q86WK6 493 aa11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 VSIG1Q86XK7 387 aa11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 CFAP206Q8IYR0 622 aa11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 SLC25A41Q8N5S1 370 aa11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 LILRA3Q8N6C8 439 aaPredicted RBP11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 C19orf47Q8N9M1 422 aaKnown RBP11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 OR52E1Q8NGJ3 308 aa11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 SYN2Q92777 582 aaPredicted RBP11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 NACC2Q96BF6 587 aa11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 FERD3LQ96RJ6 166 aa11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 DEF6Q9H4E7 631 aa11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 TFB2MQ9H5Q4 396 aaKnown RBP11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 LMBRD1Q9NUN5 540 aa11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 TXLNGQ9NUQ3 528 aa11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 ACTR10Q9NZ32 417 aa11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 CDYLQ9Y232 598 aa11.41□□□□□ -0.58
GTF3C1-209ENST00000568569 SETD2Q9BYW2 2564 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms