RNA–Protein interactions for RNA: ENST00000567988.5

FANCA-229, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 915 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-229ENST00000567988 ZNF669Q96BR6 464 aaPredicted RBP11.96□□□□□ -0.49
FANCA-229ENST00000567988 AHCYL2Q96HN2 611 aaKnown RBP11.96□□□□□ -0.49
FANCA-229ENST00000567988 SLC41A2Q96JW4 573 aa11.96□□□□□ -0.49
FANCA-229ENST00000567988 PWWP2AQ96N64 755 aa11.96□□□□□ -0.49
FANCA-229ENST00000567988 KRT12Q99456 494 aa11.96□□□□□ -0.49
FANCA-229ENST00000567988 TTC1Q99614 292 aa11.96□□□□□ -0.49
FANCA-229ENST00000567988 EBNA1BP2Q99848 306 aaKnown RBP11.96□□□□□ -0.49
FANCA-229ENST00000567988 DDA1Q9BW61 102 aa11.96□□□□□ -0.49
FANCA-229ENST00000567988 MVB12BQ9H7P6 319 aa11.96□□□□□ -0.49
FANCA-229ENST00000567988 GRHL1Q9NZI5 618 aa11.96□□□□□ -0.49
FANCA-229ENST00000567988 PISDQ9UG56 409 aa11.96□□□□□ -0.49
FANCA-229ENST00000567988 HEBP2Q9Y5Z4 205 aa11.96□□□□□ -0.49
FANCA-229ENST00000567988 TEX264Q9Y6I9 313 aa11.96□□□□□ -0.49
FANCA-229ENST00000567988 RAD51CO43502 376 aa11.95□□□□□ -0.5
FANCA-229ENST00000567988 PRAMEF10O60809 474 aa11.95□□□□□ -0.5
FANCA-229ENST00000567988 KRT37O76014 449 aa11.95□□□□□ -0.5
FANCA-229ENST00000567988 ESR1P03372 595 aa11.95□□□□□ -0.5
FANCA-229ENST00000567988 PGAM1P18669 254 aa11.95□□□□□ -0.5
FANCA-229ENST00000567988 ITPKBP27987 946 aa11.95□□□□□ -0.5
FANCA-229ENST00000567988 RBMS1P29558 406 aaKnown RBP11.95□□□□□ -0.5
FANCA-229ENST00000567988 CASQ1P31415 396 aa11.95□□□□□ -0.5
FANCA-229ENST00000567988 PPARGP37231 505 aaPredicted RBP11.95□□□□□ -0.5
FANCA-229ENST00000567988 ITGA8P53708 1063 aa11.95□□□□□ -0.5
FANCA-229ENST00000567988 TIAL1Q01085 375 aaKnown RBP eCLIP11.95□□□□□ -0.52e-7■■■□□ 14.8
FANCA-229ENST00000567988 MC2RQ01718 297 aa11.95□□□□□ -0.5
FANCA-229ENST00000567988 CLN3Q13286 438 aa11.95□□□□□ -0.5
FANCA-229ENST00000567988 RNF187Q5TA31 235 aaPredicted RBP11.95□□□□□ -0.5
FANCA-229ENST00000567988 DUPD1Q68J44 220 aa11.95□□□□□ -0.5
FANCA-229ENST00000567988 MRNIPQ6NTE8 343 aa11.95□□□□□ -0.5
FANCA-229ENST00000567988 DENND6AQ8IWF6 608 aa11.95□□□□□ -0.5
FANCA-229ENST00000567988 SPACA3Q8IXA5 215 aa11.95□□□□□ -0.5
FANCA-229ENST00000567988 LMNTD2Q8IXW0 634 aa11.95□□□□□ -0.5
FANCA-229ENST00000567988 ADGRF3Q8IZF5 1079 aa11.95□□□□□ -0.5
FANCA-229ENST00000567988 KRT222Q8N1A0 295 aa11.95□□□□□ -0.5
FANCA-229ENST00000567988 ZNF248Q8NDW4 579 aa11.95□□□□□ -0.5
FANCA-229ENST00000567988 OR52E1Q8NGJ3 308 aa11.95□□□□□ -0.5
FANCA-229ENST00000567988 OR5AR1Q8NGP9 310 aa11.95□□□□□ -0.5
FANCA-229ENST00000567988 OR5K2Q8NHB8 316 aa11.95□□□□□ -0.5
FANCA-229ENST00000567988 SNRNP27Q8WVK2 155 aaKnown RBP11.95□□□□□ -0.5
FANCA-229ENST00000567988 STAMBPL1Q96FJ0 436 aa11.95□□□□□ -0.5
FANCA-229ENST00000567988 PITPNM3Q9BZ71 974 aa11.95□□□□□ -0.5
FANCA-229ENST00000567988 FBXO8Q9NRD0 319 aa11.95□□□□□ -0.5
FANCA-229ENST00000567988 INTS10Q9NVR2 710 aaKnown RBP11.95□□□□□ -0.5
FANCA-229ENST00000567988 SAMD15Q9P1V8 674 aa11.95□□□□□ -0.5
FANCA-229ENST00000567988 GALPQ9UBC7 116 aa11.95□□□□□ -0.5
FANCA-229ENST00000567988 POMT2Q9UKY4 750 aa11.95□□□□□ -0.5
FANCA-229ENST00000567988 ICKQ9UPZ9 632 aa11.95□□□□□ -0.5
FANCA-229ENST00000567988 IGHV5-51A0A0C4DH38 117 aa11.94□□□□□ -0.5
FANCA-229ENST00000567988 FAM187AA6NFU0 413 aa11.94□□□□□ -0.5
FANCA-229ENST00000567988 BTN3A3O00478 584 aa11.94□□□□□ -0.5
FANCA-229ENST00000567988 TTC4O95801 387 aa11.94□□□□□ -0.5
FANCA-229ENST00000567988 F7P08709 466 aaPredicted RBP11.94□□□□□ -0.5
FANCA-229ENST00000567988 JMJD7P0C870 316 aa11.94□□□□□ -0.5
FANCA-229ENST00000567988 NELFEP18615 380 aaKnown RBP11.94□□□□□ -0.5
FANCA-229ENST00000567988 PAMP19021 973 aa11.94□□□□□ -0.5
FANCA-229ENST00000567988 GABRB3P28472 473 aa11.94□□□□□ -0.5
FANCA-229ENST00000567988 ATP5DP30049 168 aa11.94□□□□□ -0.5
FANCA-229ENST00000567988 SLC1A2P43004 574 aa11.94□□□□□ -0.5
FANCA-229ENST00000567988 MAPK9P45984 424 aa11.94□□□□□ -0.5
FANCA-229ENST00000567988 CLCN7P51798 805 aa11.94□□□□□ -0.5
FANCA-229ENST00000567988 KPNA2P52292 529 aaKnown RBP11.94□□□□□ -0.5
FANCA-229ENST00000567988 LONRF1Q17RB8 773 aa11.94□□□□□ -0.5
FANCA-229ENST00000567988 PLEKHS1Q5SXH7 462 aa11.94□□□□□ -0.5
FANCA-229ENST00000567988 ZNF470Q6ECI4 717 aa11.94□□□□□ -0.5
FANCA-229ENST00000567988 CASC4Q6P4E1 433 aa11.94□□□□□ -0.5
FANCA-229ENST00000567988 GALNT7Q86SF2 657 aa11.94□□□□□ -0.5
FANCA-229ENST00000567988 TBC1D21Q8IYX1 336 aa11.94□□□□□ -0.5
FANCA-229ENST00000567988 CARFQ8N187 725 aa11.94□□□□□ -0.5
FANCA-229ENST00000567988 PHC3Q8NDX5 983 aa11.94□□□□□ -0.5
FANCA-229ENST00000567988 GIMAP7Q8NHV1 300 aa11.94□□□□□ -0.5
FANCA-229ENST00000567988 ASZ1Q8WWH4 475 aa11.94□□□□□ -0.5
FANCA-229ENST00000567988 SEC14L1Q92503 715 aa11.94□□□□□ -0.5
FANCA-229ENST00000567988 USP7Q93009 1102 aa11.94□□□□□ -0.5
FANCA-229ENST00000567988 LRRC39Q96DD0 335 aa11.94□□□□□ -0.5
FANCA-229ENST00000567988 SNF8Q96H20 258 aa11.94□□□□□ -0.5
FANCA-229ENST00000567988 TGM7Q96PF1 710 aa11.94□□□□□ -0.5
FANCA-229ENST00000567988 TAAR9Q96RI9 348 aa11.94□□□□□ -0.5
FANCA-229ENST00000567988 CD180Q99467 661 aa11.94□□□□□ -0.5
FANCA-229ENST00000567988 ERP44Q9BS26 406 aa11.94□□□□□ -0.5
FANCA-229ENST00000567988 NAT9Q9BTE0 207 aa11.94□□□□□ -0.5
FANCA-229ENST00000567988 DPH1Q9BZG8 443 aa11.94□□□□□ -0.5
FANCA-229ENST00000567988 GNPTGQ9UJJ9 305 aa11.94□□□□□ -0.5
FANCA-229ENST00000567988 ANAPC5Q9UJX4 755 aa11.94□□□□□ -0.5
FANCA-229ENST00000567988 B3GALT1Q9Y5Z6 326 aa11.94□□□□□ -0.5
FANCA-229ENST00000567988 COLEC10Q9Y6Z7 277 aa11.94□□□□□ -0.5
FANCA-229ENST00000567988 SDK2Q58EX2 2172 aa11.94□□□□□ -0.5
FANCA-229ENST00000567988 CACNA1GO43497 2377 aa11.93□□□□□ -0.5
FANCA-229ENST00000567988 TLCD2A6NGC4 264 aa11.93□□□□□ -0.5
FANCA-229ENST00000567988 EFCAB7A8K855 629 aa11.93□□□□□ -0.5
FANCA-229ENST00000567988 IFRD1O00458 451 aaPredicted RBP11.93□□□□□ -0.5
FANCA-229ENST00000567988 BTN3A1O00481 513 aa11.93□□□□□ -0.5
FANCA-229ENST00000567988 EFSO43281 561 aa11.93□□□□□ -0.5
FANCA-229ENST00000567988 NIPSNAP2O75323 286 aa11.93□□□□□ -0.5
FANCA-229ENST00000567988 NDUFS3O75489 264 aa11.93□□□□□ -0.5
FANCA-229ENST00000567988 C1QAP02745 245 aa11.93□□□□□ -0.5
FANCA-229ENST00000567988 AMD1P17707 334 aa11.93□□□□□ -0.5
FANCA-229ENST00000567988 ITGB6P18564 788 aa11.93□□□□□ -0.5
FANCA-229ENST00000567988 CD82P27701 267 aa11.93□□□□□ -0.5
FANCA-229ENST00000567988 PEBP1P30086 187 aaKnown RBP11.93□□□□□ -0.5
FANCA-229ENST00000567988 CSTF2P33240 577 aaKnown RBP eCLIP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms