RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 SIDT2Q8NBJ9 832 aaKnown RBP12.21□□□□□ -0.45
CSPG4P13-202ENST00000567704 TMEM169Q96HH4 297 aa12.21□□□□□ -0.45
CSPG4P13-202ENST00000567704 SLC45A3Q96JT2 553 aa12.21□□□□□ -0.45
CSPG4P13-202ENST00000567704 ATG10Q9H0Y0 220 aa12.21□□□□□ -0.45
CSPG4P13-202ENST00000567704 PAQR5Q9NXK6 330 aaPredicted RBP12.21□□□□□ -0.45
CSPG4P13-202ENST00000567704 TVP23BQ9NYZ1 205 aa12.21□□□□□ -0.45
CSPG4P13-202ENST00000567704 ST3GAL5Q9UNP4 418 aa12.21□□□□□ -0.45
CSPG4P13-202ENST00000567704 LTBP4Q8N2S1 1624 aa12.21□□□□□ -0.45
CSPG4P13-202ENST00000567704 SDHDO14521 159 aa12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 DNAJA1P31689 397 aaKnown RBP12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 TGFBR2P37173 567 aa12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 CD97P48960 835 aa12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 CXCR3P49682 368 aa12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 HMGCS1Q01581 520 aa12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 MFSD10Q14728 455 aa12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 CRYBG2Q8N1P7 616 aa12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 OR6K2Q8NGY2 324 aa12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 ERMAPQ96PL5 475 aaPredicted RBP12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 BARD1Q99728 777 aaKnown RBP12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 PDGFDQ9GZP0 370 aaPredicted RBP12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 MMP27Q9H306 513 aa12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 ADAMTS10Q9H324 1103 aa12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 AKAP7Q9P0M2 348 aaPredicted RBP12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 GALPQ9UBC7 116 aa12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 ABT1Q9ULW3 272 aaKnown RBP12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 N6AMT1Q9Y5N5 214 aa12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 TLR5O60602 858 aa12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 ERN1O75460 977 aaKnown RBP12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 LRG1P02750 347 aa12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 ALDH2P05091 517 aa12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 MAP2K4P45985 399 aa12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 TAS2R41P59536 307 aa12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 ARF5P84085 180 aa12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 MS4A2Q01362 244 aa12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 FOXM1Q08050 763 aa12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 MAB21L1Q13394 359 aa12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 PAQR3Q6TCH7 311 aa12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 CATSPERGQ6ZRH7 1159 aa12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 HJURPQ8NCD3 748 aaPredicted RBP12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 OR10G2Q8NGC3 310 aa12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 XAGE5Q8WWM1 108 aa12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 GAB3Q8WWW8 586 aa12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 TTYH2Q9BSA4 534 aa12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 C14orf119Q9NWQ9 140 aa12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 TAS2R7Q9NYW3 318 aa12.21□□□□□ -0.46
CSPG4P13-202ENST00000567704 SMIM28A0A1B0GU29 152 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 GSAPA4D1B5 854 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 CHST10O43529 356 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 GADD45GO95257 159 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 IFNA7P01567 189 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 DSC3Q14574 896 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 RFTN1Q14699 578 aaPredicted RBP12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 IFI44LQ53G44 452 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 SLC39A4Q6P5W5 647 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 PLEKHH3Q7Z736 793 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 DENND1CQ8IV53 801 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 KAT2AQ92830 837 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 LPPQ93052 612 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 C8orf48Q96LL4 319 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 FUNDC2Q9BWH2 189 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 SGK2Q9HBY8 427 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 RDH8Q9NYR8 311 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 SLC2A6Q9UGQ3 507 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 E9PAM4 449 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 ANXA4P09525 319 aaPredicted RBP12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 CYP3A5P20815 502 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 CD72P21854 359 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 ADORA2AP29274 412 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 SLC9A3P48764 834 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 RUNDC3AQ59EK9 446 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 FKBP1CQ5VVH2 108 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 PQLC3Q8N755 202 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 CNIH3Q8TBE1 160 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 TNFAIP8L1Q8WVP5 186 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 UBE2E3Q969T4 207 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 KCNA7Q96RP8 456 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 PEBP4Q96S96 227 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 C2orf49Q9BVC5 232 aaPredicted RBP12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 ZCCHC2Q9C0B9 1178 aaKnown RBP12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 PAK1IP1Q9NWT1 392 aaPredicted RBP12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 MAN2B2Q9Y2E5 1009 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 GIT1Q9Y2X7 761 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 RFPL2O75678 378 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 PRPS2P11908 318 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 ANXA8P13928 327 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 LMO2P25791 158 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 CASP9P55211 416 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 CSTF1Q05048 431 aaKnown RBP12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 IDNKQ5T6J7 187 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 SLC37A3Q8NCC5 494 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 C9orf43Q8TAL5 461 aaPredicted RBP12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 GPR152Q8TDT2 470 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 CLP1Q92989 425 aaKnown RBP12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 SLC7A5P2Q9GIP4 190 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 ZDHHC6Q9H6R6 413 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 BRD9Q9H8M2 597 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 BCL9LQ86UU0 1499 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 H0YAE9 185 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 RASAL1O95294 804 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 202.6 ms