RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 CAPN13Q6MZZ7 669 aaPredicted RBP15.41■□□□□ 0.06
COMMD4-215ENST00000566843 SVOPQ8N4V2 548 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 C3orf58Q8NDZ4 430 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 OR6J1Q8NGC5 347 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 BLOC1S5Q8TDH9 187 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 NUDT8Q8WV74 236 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 GTF2H4Q92759 462 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 FAM162AQ96A26 154 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 TBC1D20Q96BZ9 403 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 LGALS12Q96DT0 336 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 PKMYT1Q99640 499 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 SP110Q9HB58 689 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 HECAQ9UBI9 543 aaPredicted RBP15.41■□□□□ 0.06
COMMD4-215ENST00000566843 EIF2B4Q9UI10 523 aaKnown RBP15.41■□□□□ 0.06
COMMD4-215ENST00000566843 ASB1Q9Y576 335 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 CLDN24A6NM45 220 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 BTN3A1O00481 513 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 RGS13O14921 159 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 TSPAN12O95859 305 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 EPOP01588 193 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 PRSS56P0CW18 603 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 FMO4P31512 558 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 FMO3P31513 532 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 HTR6P50406 440 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 SCNN1GP51170 649 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 HABP4Q5JVS0 413 aaKnown RBP15.41■□□□□ 0.06
COMMD4-215ENST00000566843 MSRB3Q8IXL7 192 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 PLPP6Q8IY26 295 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 MICU2Q8IYU8 434 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 SLC13A3Q8WWT9 602 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 CDKN2AIPNLQ96HQ2 116 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 YME1L1Q96TA2 773 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 GPR21Q99679 349 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 KAT8Q9H7Z6 458 aaKnown RBP15.41■□□□□ 0.06
COMMD4-215ENST00000566843 TMEM248Q9NWD8 314 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 SCN3BQ9NY72 215 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 SLCO3A1Q9UIG8 710 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 FAM50BQ9Y247 325 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 TESMINQ9Y4I5 508 aa15.41■□□□□ 0.06
COMMD4-215ENST00000566843 DOCK4Q8N1I0 1966 aa15.4■□□□□ 0.06
COMMD4-215ENST00000566843 PABPN1LA6NDY0 278 aaKnown RBP15.4■□□□□ 0.06
COMMD4-215ENST00000566843 NCF1BA6NI72 391 aaPredicted RBP15.4■□□□□ 0.06
COMMD4-215ENST00000566843 SAGE2PA6NJ88 616 aa15.4■□□□□ 0.06
COMMD4-215ENST00000566843 NCF1CA8MVU1 366 aaPredicted RBP15.4■□□□□ 0.06
COMMD4-215ENST00000566843 RFPL2O75678 378 aa15.4■□□□□ 0.06
COMMD4-215ENST00000566843 MOCS2O96007 188 aaPredicted RBP15.4■□□□□ 0.06
COMMD4-215ENST00000566843 FTH1P02794 183 aa15.4■□□□□ 0.06
COMMD4-215ENST00000566843 MT-ND2P03891 347 aa15.4■□□□□ 0.06
COMMD4-215ENST00000566843 NCF1P14598 390 aaPredicted RBP15.4■□□□□ 0.06
COMMD4-215ENST00000566843 UGT2B10P36537 528 aa15.4■□□□□ 0.06
COMMD4-215ENST00000566843 TGFBR2P37173 567 aa15.4■□□□□ 0.06
COMMD4-215ENST00000566843 PGFP49763 221 aa15.4■□□□□ 0.06
COMMD4-215ENST00000566843 CLCNKBP51801 687 aa15.4■□□□□ 0.06
COMMD4-215ENST00000566843 FCGRTP55899 365 aa15.4■□□□□ 0.06
COMMD4-215ENST00000566843 GBX1Q14549 363 aa15.4■□□□□ 0.06
COMMD4-215ENST00000566843 AAK1Q2M2I8 961 aa15.4■□□□□ 0.06
COMMD4-215ENST00000566843 RUNDC3AQ59EK9 446 aa15.4■□□□□ 0.06
COMMD4-215ENST00000566843 LETMD1Q6P1Q0 360 aa15.4■□□□□ 0.06
COMMD4-215ENST00000566843 SHQ1Q6PI26 577 aaKnown RBP15.4■□□□□ 0.06
COMMD4-215ENST00000566843 SCD5Q86SK9 330 aa15.4■□□□□ 0.06
COMMD4-215ENST00000566843 MMAAQ8IVH4 418 aaKnown RBP15.4■□□□□ 0.06
COMMD4-215ENST00000566843 PSMA8Q8TAA3 256 aa15.4■□□□□ 0.06
COMMD4-215ENST00000566843 PSMG2Q969U7 264 aa15.4■□□□□ 0.06
COMMD4-215ENST00000566843 ACBD6Q9BR61 282 aa15.4■□□□□ 0.06
COMMD4-215ENST00000566843 IKZF5Q9H5V7 419 aa15.4■□□□□ 0.06
COMMD4-215ENST00000566843 ACOT13Q9NPJ3 140 aa15.4■□□□□ 0.06
COMMD4-215ENST00000566843 TMLHEQ9NVH6 421 aa15.4■□□□□ 0.06
COMMD4-215ENST00000566843 UBA6A0AVT1 1052 aaPredicted RBP15.4■□□□□ 0.06
COMMD4-215ENST00000566843 CD9P21926 228 aa15.4■□□□□ 0.06
COMMD4-215ENST00000566843 PSMB9P28065 219 aa15.4■□□□□ 0.06
COMMD4-215ENST00000566843 ADAM17P78536 824 aa15.4■□□□□ 0.06
COMMD4-215ENST00000566843 PPP1R8Q12972 351 aaKnown RBP15.4■□□□□ 0.06
COMMD4-215ENST00000566843 RGMBQ6NW40 437 aa15.4■□□□□ 0.06
COMMD4-215ENST00000566843 OR52B6Q8NGF0 335 aa15.4■□□□□ 0.06
COMMD4-215ENST00000566843 MCFD2Q8NI22 146 aa15.4■□□□□ 0.06
COMMD4-215ENST00000566843 SH3GL1Q99961 368 aa15.4■□□□□ 0.06
COMMD4-215ENST00000566843 THUMPD3Q9BV44 507 aaKnown RBP15.4■□□□□ 0.06
COMMD4-215ENST00000566843 MMP27Q9H306 513 aa15.4■□□□□ 0.06
COMMD4-215ENST00000566843 CCNB1IP1Q9NPC3 277 aa15.4■□□□□ 0.06
COMMD4-215ENST00000566843 NLE1Q9NVX2 485 aaPredicted RBP15.4■□□□□ 0.06
COMMD4-215ENST00000566843 ABT1Q9ULW3 272 aaKnown RBP15.4■□□□□ 0.06
COMMD4-215ENST00000566843 POLR3HQ9Y535 204 aaPredicted RBP15.4■□□□□ 0.06
COMMD4-215ENST00000566843 MN1Q10571 1320 aaPredicted RBP15.39■□□□□ 0.05
COMMD4-215ENST00000566843 PTPRDP23468 1912 aa15.39■□□□□ 0.05
COMMD4-215ENST00000566843 MITFO75030 526 aaPredicted RBP15.39■□□□□ 0.05
COMMD4-215ENST00000566843 CREG1O75629 220 aa15.39■□□□□ 0.05
COMMD4-215ENST00000566843 KCNK2O95069 426 aa15.39■□□□□ 0.05
COMMD4-215ENST00000566843 CLK3P49761 638 aaKnown RBP15.39■□□□□ 0.05
COMMD4-215ENST00000566843 SLC13A2Q13183 592 aa15.39■□□□□ 0.05
COMMD4-215ENST00000566843 TRIP4Q15650 581 aaPredicted RBP15.39■□□□□ 0.05
COMMD4-215ENST00000566843 AP5B1Q2VPB7 878 aa15.39■□□□□ 0.05
COMMD4-215ENST00000566843 PLEKHG6Q3KR16 790 aa15.39■□□□□ 0.05
COMMD4-215ENST00000566843 IL27RAQ6UWB1 636 aa15.39■□□□□ 0.05
COMMD4-215ENST00000566843 ZNF467Q7Z7K2 595 aaPredicted RBP15.39■□□□□ 0.05
COMMD4-215ENST00000566843 CYP4Z1Q86W10 505 aa15.39■□□□□ 0.05
COMMD4-215ENST00000566843 CALHM3Q86XJ0 350 aa15.39■□□□□ 0.05
COMMD4-215ENST00000566843 GPSM1Q86YR5 675 aa15.39■□□□□ 0.05
COMMD4-215ENST00000566843 CHCHD4Q8N4Q1 142 aa15.39■□□□□ 0.05
COMMD4-215ENST00000566843 ESAMQ96AP7 390 aa15.39■□□□□ 0.05
COMMD4-215ENST00000566843 ZNF486Q96H40 463 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms