RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 CTAGE8P0CG41 777 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 ITGB6P18564 788 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 PDHA2P29803 388 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 SLC5A2P31639 672 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 CCR7P32248 378 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 ETV5P41161 510 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 PREPP48147 710 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 MAPK10P53779 464 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 SLC7A5Q01650 507 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 PLOD1Q02809 727 aaPredicted RBP13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 PDIA2Q13087 525 aaKnown RBP13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 KRT33BQ14525 404 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 TRADDQ15628 312 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 SPANXN3Q5MJ09 141 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 TMEM164Q5U3C3 297 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 ZNF470Q6ECI4 717 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 KLHL35Q6PF15 583 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 NAPRTQ6XQN6 538 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 CTAGE6Q86UF2 777 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 LRRC6Q86X45 466 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 DENND6AQ8IWF6 608 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 CTAGE4Q8IX94 777 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 LMNTD2Q8IXW0 634 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 NOA1Q8NC60 698 aaKnown RBP13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 HNRNPLLQ8WVV9 542 aaKnown RBP13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 ELMO1Q92556 727 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 LPGAT1Q92604 370 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 ART4Q93070 314 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 RMDN2Q96LZ7 410 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 BIRC8Q96P09 236 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 CARD6Q9BX69 1037 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 B3GNT4Q9C0J1 378 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 RAB33BQ9H082 229 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 EPHA6Q9UF33 1036 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 ZC3H7BQ9UGR2 993 aaKnown RBP13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 KLHL3Q9UH77 587 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 PTPRQQ9UMZ3 2332 aa13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 UBA6A0AVT1 1052 aaPredicted RBP13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 SLC5A10A0PJK1 596 aa13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 PFDN6O15212 129 aa13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 TOX3O15405 576 aaPredicted RBP13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 S1PR4O95977 384 aa13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 F7P08709 466 aaPredicted RBP13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 FGF3P11487 239 aaPredicted RBP13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 CCL4P13236 92 aa13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 FMO4P31512 558 aa13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 SLC1A2P43004 574 aa13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 CAPZBP47756 277 aa13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 GFERP55789 205 aa13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 EIF3BP55884 814 aaKnown RBP13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 CTBP1Q13363 440 aa13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 FASTKD3Q14CZ7 662 aaKnown RBP13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 BRD3Q15059 726 aa13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 PLCL1Q15111 1095 aa13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 HSP90AA5PQ58FG0 334 aa13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 ZNF789Q5FWF6 425 aa13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 CTSL3PQ5NE16 218 aa13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 RNF187Q5TA31 235 aaPredicted RBP13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 STEAP4Q687X5 459 aa13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 PTRHD1Q6GMV3 140 aaKnown RBP13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 DUS1LQ6P1R4 473 aaKnown RBP13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 ZDHHC24Q6UX98 284 aa13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 UNC5AQ6ZN44 842 aa13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 KCNMB4Q86W47 210 aa13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 ANKMY2Q8IV38 441 aa13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 KRT222Q8N1A0 295 aa13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 CALML6Q8TD86 181 aa13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 KCNE4Q8WWG9 221 aa13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 RSC1A1Q92681 617 aa13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 USP7Q93009 1102 aa13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 CFAP36Q96G28 342 aa13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 ZDHHC12Q96GR4 267 aa13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 C9orf72Q96LT7 481 aa13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 TAAR9Q96RI9 348 aa13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 FERD3LQ96RJ6 166 aa13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 TSSK1BQ9BXA7 367 aa13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 DPH1Q9BZG8 443 aa13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 KIR3DX1Q9H7L2 352 aa13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 IARS2Q9NSE4 1012 aaKnown RBP13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 INTS10Q9NVR2 710 aaKnown RBP13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 SLC24A2Q9UI40 661 aa13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 GNPTGQ9UJJ9 305 aa13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 FBXO5Q9UKT4 447 aa13.48□□□□□ -0.25
HERPUD1-210ENST00000565966 EFCAB7A8K855 629 aa13.47□□□□□ -0.25
HERPUD1-210ENST00000565966 B4E171 279 aa13.47□□□□□ -0.25
HERPUD1-210ENST00000565966 BHMG1C9JSJ3 638 aaPredicted RBP13.47□□□□□ -0.25
HERPUD1-210ENST00000565966 SNRNP200O75643 2136 aaKnown RBP13.47□□□□□ -0.25
HERPUD1-210ENST00000565966 KRT37O76014 449 aa13.47□□□□□ -0.25
HERPUD1-210ENST00000565966 ANKRD34CP0C6C1 535 aa13.47□□□□□ -0.25
HERPUD1-210ENST00000565966 ERVK-10P10266 1014 aa13.47□□□□□ -0.25
HERPUD1-210ENST00000565966 TSPAN7P41732 249 aa13.47□□□□□ -0.25
HERPUD1-210ENST00000565966 ABCG1P45844 678 aa13.47□□□□□ -0.25
HERPUD1-210ENST00000565966 PLTPP55058 493 aa13.47□□□□□ -0.25
HERPUD1-210ENST00000565966 ADARP55265 1226 aaKnown RBP13.47□□□□□ -0.25
HERPUD1-210ENST00000565966 CAV1Q03135 178 aa13.47□□□□□ -0.25
HERPUD1-210ENST00000565966 BOP1Q14137 746 aaKnown RBP13.47□□□□□ -0.25
HERPUD1-210ENST00000565966 PDZD3Q86UT5 571 aa13.47□□□□□ -0.25
HERPUD1-210ENST00000565966 FBXO36Q8NEA4 188 aa13.47□□□□□ -0.25
HERPUD1-210ENST00000565966 ACVR1CQ8NER5 493 aa13.47□□□□□ -0.25
HERPUD1-210ENST00000565966 FBXO25Q8TCJ0 367 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms