RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 DDX31Q9H8H2 851 aaKnown RBP4.46□□□□□ -1.7
LINC00560-201ENST00000564593 KLHL1Q9NR64 748 aa4.46□□□□□ -1.7
LINC00560-201ENST00000564593 TEX13DA0A0J9YY54 714 aaPredicted RBP4.45□□□□□ -1.7
LINC00560-201ENST00000564593 MED19A0JLT2 244 aaPredicted RBP4.45□□□□□ -1.7
LINC00560-201ENST00000564593 FEZF1A0PJY2 475 aa4.45□□□□□ -1.7
LINC00560-201ENST00000564593 TRIM77I1YAP6 450 aa4.45□□□□□ -1.7
LINC00560-201ENST00000564593 OR52Z1P0C646 297 aa4.45□□□□□ -1.7
LINC00560-201ENST00000564593 TPD52P55327 224 aaPredicted RBP4.45□□□□□ -1.7
LINC00560-201ENST00000564593 PPARDQ03181 441 aa4.45□□□□□ -1.7
LINC00560-201ENST00000564593 PNRC1Q12796 327 aaPredicted RBP4.45□□□□□ -1.7
LINC00560-201ENST00000564593 DUOXA1Q1HG43 343 aa4.45□□□□□ -1.7
LINC00560-201ENST00000564593 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.45□□□□□ -1.7
LINC00560-201ENST00000564593 TMPRSS11FQ6ZWK6 438 aa4.45□□□□□ -1.7
LINC00560-201ENST00000564593 ERN2Q76MJ5 926 aaKnown RBP4.45□□□□□ -1.7
LINC00560-201ENST00000564593 DET1Q7L5Y6 550 aa4.45□□□□□ -1.7
LINC00560-201ENST00000564593 PIWIL4Q7Z3Z4 852 aaKnown RBP4.45□□□□□ -1.7
LINC00560-201ENST00000564593 GALNTL5Q7Z4T8 443 aa4.45□□□□□ -1.7
LINC00560-201ENST00000564593 ADCK2Q7Z695 626 aa4.45□□□□□ -1.7
LINC00560-201ENST00000564593 RBM23Q86U06 439 aaKnown RBP4.45□□□□□ -1.7
LINC00560-201ENST00000564593 LONP2Q86WA8 852 aa4.45□□□□□ -1.7
LINC00560-201ENST00000564593 CEP57L1Q8IYX8 460 aa4.45□□□□□ -1.7
LINC00560-201ENST00000564593 L3MBTL4Q8NA19 623 aa4.45□□□□□ -1.7
LINC00560-201ENST00000564593 SECTM1Q8WVN6 248 aa4.45□□□□□ -1.7
LINC00560-201ENST00000564593 MARK4Q96L34 752 aa4.45□□□□□ -1.7
LINC00560-201ENST00000564593 GBP5Q96PP8 586 aa4.45□□□□□ -1.7
LINC00560-201ENST00000564593 MRGBPQ9NV56 204 aa4.45□□□□□ -1.7
LINC00560-201ENST00000564593 PADI2Q9Y2J8 665 aa4.45□□□□□ -1.7
LINC00560-201ENST00000564593 NME7Q9Y5B8 376 aa4.45□□□□□ -1.7
LINC00560-201ENST00000564593 PCDHGB1Q9Y5G3 927 aa4.45□□□□□ -1.7
LINC00560-201ENST00000564593 SCRIBQ14160 1630 aa4.45□□□□□ -1.7
LINC00560-201ENST00000564593 CTAGE9A4FU28 777 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 TMEM221A6NGB7 291 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 TULP2O00295 520 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 PENKP01210 267 aaPredicted RBP4.44□□□□□ -1.7
LINC00560-201ENST00000564593 CTAGE8P0CG41 777 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 HSPA4P34932 840 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 ZNF132P52740 706 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 RPL24P83731 157 aaKnown RBP4.44□□□□□ -1.7
LINC00560-201ENST00000564593 EEF1A2Q05639 463 aaKnown RBP4.44□□□□□ -1.7
LINC00560-201ENST00000564593 ALDH1L2Q3SY69 923 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 ZNF585BQ52M93 769 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 GRTP1Q5TC63 336 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 ZNF324BQ6AW86 544 aaPredicted RBP4.44□□□□□ -1.7
LINC00560-201ENST00000564593 KCTD8Q6ZWB6 473 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 SLC9B2Q86UD5 537 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 CTAGE4Q8IX94 777 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 MAML2Q8IZL2 1156 aaPredicted RBP4.44□□□□□ -1.7
LINC00560-201ENST00000564593 LMO3Q8TAP4 145 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 RB1CC1Q8TDY2 1594 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 HYKKA2RU49 373 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 PRAC2D3DTV9 90 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 SYNGR3O43761 229 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 OR10H2O60403 315 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 PDE9AO76083 593 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 ACP2P11117 423 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 IFNAR1P17181 557 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 CKMT2P17540 419 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 CBLP22681 906 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 ACSM1Q08AH1 577 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 COASYQ13057 564 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 MDH1BQ5I0G3 518 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 HECTD3Q5T447 861 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 SUSD1Q6UWL2 747 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 ZNF517Q6ZMY9 492 aaPredicted RBP4.44□□□□□ -1.7
LINC00560-201ENST00000564593 DGLUCYQ7Z3D6 616 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 DSG4Q86SJ6 1040 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 COMMD2Q86X83 199 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 DCP1BQ8IZD4 617 aaKnown RBP4.44□□□□□ -1.7
LINC00560-201ENST00000564593 CRYBG2Q8N1P7 616 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 PPFIBP2Q8ND30 876 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 SPATA20Q8TB22 786 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 ROBO4Q8WZ75 1007 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 ADPGKQ9BRR6 497 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 BTBD10Q9BSF8 475 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 LRRC1Q9BTT6 524 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 EVA1AQ9H8M9 152 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 ACKR4Q9NPB9 350 aa4.44□□□□□ -1.7
LINC00560-201ENST00000564593 A0A1W2PS18 150 aa4.43□□□□□ -1.7
LINC00560-201ENST00000564593 DENND3A2RUS2 1198 aa4.43□□□□□ -1.7
LINC00560-201ENST00000564593 SNRNP70P08621 437 aaKnown RBP4.43□□□□□ -1.7
LINC00560-201ENST00000564593 RAB40ALP0C0E4 278 aa4.43□□□□□ -1.7
LINC00560-201ENST00000564593 FGF3P11487 239 aaPredicted RBP4.43□□□□□ -1.7
LINC00560-201ENST00000564593 EEF1B2P24534 225 aaKnown RBP4.43□□□□□ -1.7
LINC00560-201ENST00000564593 GP5P40197 560 aa4.43□□□□□ -1.7
LINC00560-201ENST00000564593 NPY4RP50391 375 aa4.43□□□□□ -1.7
LINC00560-201ENST00000564593 RPS18P62269 152 aaKnown RBP4.43□□□□□ -1.7
LINC00560-201ENST00000564593 MBTD1Q05BQ5 628 aa4.43□□□□□ -1.7
LINC00560-201ENST00000564593 PPIGQ13427 754 aaKnown RBP eCLIP4.43□□□□□ -1.7
LINC00560-201ENST00000564593 ZNF273Q14593 569 aa4.43□□□□□ -1.7
LINC00560-201ENST00000564593 SIRPB2Q5JXA9 342 aa4.43□□□□□ -1.7
LINC00560-201ENST00000564593 PDSS1Q5T2R2 415 aa4.43□□□□□ -1.7
LINC00560-201ENST00000564593 SPSB3Q6PJ21 355 aa4.43□□□□□ -1.7
LINC00560-201ENST00000564593 PPP1R21Q6ZMI0 780 aa4.43□□□□□ -1.7
LINC00560-201ENST00000564593 METTL23Q86XA0 190 aa4.43□□□□□ -1.7
LINC00560-201ENST00000564593 GPALPP1Q8IXQ4 340 aa4.43□□□□□ -1.7
LINC00560-201ENST00000564593 IQUBQ8NA54 791 aa4.43□□□□□ -1.7
LINC00560-201ENST00000564593 SETD6Q8TBK2 473 aa4.43□□□□□ -1.7
LINC00560-201ENST00000564593 RNF128Q8TEB7 428 aa4.43□□□□□ -1.7
LINC00560-201ENST00000564593 SPAG5Q96R06 1193 aa4.43□□□□□ -1.7
LINC00560-201ENST00000564593 MYNNQ9NPC7 610 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms