RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 HEXIM1O94992 359 aaKnown RBP10.14□□□□□ -0.79
HDGFL3-204ENST00000563790 BMP15O95972 392 aa10.14□□□□□ -0.79
HDGFL3-204ENST00000563790 CD46P15529 392 aa10.14□□□□□ -0.79
HDGFL3-204ENST00000563790 NSG1P42857 185 aa10.14□□□□□ -0.79
HDGFL3-204ENST00000563790 ZNF33BQ06732 778 aa10.14□□□□□ -0.79
HDGFL3-204ENST00000563790 C8orf34Q49A92 452 aa10.14□□□□□ -0.79
HDGFL3-204ENST00000563790 TXNRD3NBQ6F5E7 133 aa10.14□□□□□ -0.79
HDGFL3-204ENST00000563790 SHISA2Q6UWI4 295 aa10.14□□□□□ -0.79
HDGFL3-204ENST00000563790 NDUFAF7Q7L592 441 aa10.14□□□□□ -0.79
HDGFL3-204ENST00000563790 EPM2AIP1Q7L775 607 aaPredicted RBP10.14□□□□□ -0.79
HDGFL3-204ENST00000563790 OVCH1Q7RTY7 1134 aa10.14□□□□□ -0.79
HDGFL3-204ENST00000563790 NUP43Q8NFH3 380 aa10.14□□□□□ -0.79
HDGFL3-204ENST00000563790 RASSF8Q8NHQ8 419 aa10.14□□□□□ -0.79
HDGFL3-204ENST00000563790 C1orf74Q96LT6 269 aa10.14□□□□□ -0.79
HDGFL3-204ENST00000563790 DACH2Q96NX9 599 aa10.14□□□□□ -0.79
HDGFL3-204ENST00000563790 CLIC6Q96NY7 704 aa10.14□□□□□ -0.79
HDGFL3-204ENST00000563790 SP110Q9HB58 689 aa10.14□□□□□ -0.79
HDGFL3-204ENST00000563790 TFIP11Q9UBB9 837 aaKnown RBP10.14□□□□□ -0.79
HDGFL3-204ENST00000563790 TEKT2Q9UIF3 430 aa10.14□□□□□ -0.79
HDGFL3-204ENST00000563790 PSMD11O00231 422 aa10.13□□□□□ -0.79
HDGFL3-204ENST00000563790 PRMT3O60678 531 aa10.13□□□□□ -0.79
HDGFL3-204ENST00000563790 TMCC2O75069 709 aa10.13□□□□□ -0.79
HDGFL3-204ENST00000563790 ATP1A1P05023 1023 aaKnown RBP10.13□□□□□ -0.79
HDGFL3-204ENST00000563790 CELA2AP08217 269 aa10.13□□□□□ -0.79
HDGFL3-204ENST00000563790 ITGAMP11215 1152 aa10.13□□□□□ -0.79
HDGFL3-204ENST00000563790 COX6A1P12074 109 aa10.13□□□□□ -0.79
HDGFL3-204ENST00000563790 TFEBP19484 476 aa10.13□□□□□ -0.79
HDGFL3-204ENST00000563790 IGFBP5P24593 272 aa10.13□□□□□ -0.79
HDGFL3-204ENST00000563790 SERPINA4P29622 427 aa10.13□□□□□ -0.79
HDGFL3-204ENST00000563790 TUBA3CQ13748 450 aa10.13□□□□□ -0.79
HDGFL3-204ENST00000563790 TMEM249Q2WGJ8 235 aa10.13□□□□□ -0.79
HDGFL3-204ENST00000563790 TFDP3Q5H9I0 405 aa10.13□□□□□ -0.79
HDGFL3-204ENST00000563790 C1orf220Q5T0J3 134 aa10.13□□□□□ -0.79
HDGFL3-204ENST00000563790 DENND2CQ68D51 928 aa10.13□□□□□ -0.79
HDGFL3-204ENST00000563790 RTL6Q6ICC9 239 aa10.13□□□□□ -0.79
HDGFL3-204ENST00000563790 TUBA3EQ6PEY2 450 aa10.13□□□□□ -0.79
HDGFL3-204ENST00000563790 BRAPQ7Z569 592 aa10.13□□□□□ -0.79
HDGFL3-204ENST00000563790 ZNF747Q9BV97 191 aa10.13□□□□□ -0.79
HDGFL3-204ENST00000563790 TXLNGQ9NUQ3 528 aa10.13□□□□□ -0.79
HDGFL3-204ENST00000563790 NXT1Q9UKK6 140 aaKnown RBP10.13□□□□□ -0.79
HDGFL3-204ENST00000563790 KIAA1257Q9ULG3 409 aa10.13□□□□□ -0.79
HDGFL3-204ENST00000563790 MORC2Q9Y6X9 1032 aaPredicted RBP10.13□□□□□ -0.79
HDGFL3-204ENST00000563790 A0A1W2PQ72 361 aa10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 PDZK1P1A8MUH7 402 aa10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 FAM47E-STBD1D6RA91 191 aa10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 M0QYV0 167 aa10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 TFECO14948 347 aaPredicted RBP10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 KDELR3O43731 214 aa10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 CDC40O60508 579 aaKnown RBP eCLIP10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 LMX1BO60663 402 aa10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 OR2B3O76000 313 aa10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 PYGLP06737 847 aa10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 SP1P08047 785 aa10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 VLDLRP98155 873 aa10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 APBA1Q02410 837 aa10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 NME3Q13232 169 aa10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 MESDQ14696 234 aa10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 OR1C1Q15619 314 aa10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 SLC5A12Q1EHB4 618 aa10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 GXYLT1Q4G148 440 aa10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 FAM120AOSQ5T036 256 aa10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 ACBD5Q5T8D3 534 aaPredicted RBP10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 CNSTQ6PJW8 725 aa10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 WASH2PQ6VEQ5 465 aa10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 SHISA6Q6ZSJ9 500 aa10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 SV2BQ7L1I2 683 aa10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 OOSP2Q86WS3 158 aa10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 AMER3Q8N944 861 aa10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 CCDC150Q8NCX0 1101 aa10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 EXD1Q8NHP7 514 aa10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 C8orf44Q96CB5 159 aa10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 ZYG11BQ9C0D3 744 aa10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 MAGEH1Q9H213 219 aa10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 THAP9Q9H5L6 903 aa10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 CXorf56Q9H5V9 222 aa10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 SOX17Q9H6I2 414 aaPredicted RBP10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 ATP13A3Q9H7F0 1226 aa10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 PNPLA3Q9NST1 481 aa10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 SPTLC3Q9NUV7 552 aa10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 ZFATQ9P243 1243 aa10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 CGNQ9P2M7 1197 aaKnown RBP10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 MTRF1LQ9UGC7 380 aaKnown RBP10.12□□□□□ -0.79
HDGFL3-204ENST00000563790 PLCE1Q9P212 2302 aa10.11□□□□□ -0.79
HDGFL3-204ENST00000563790 HYKKA2RU49 373 aa10.11□□□□□ -0.79
HDGFL3-204ENST00000563790 GOLGA8SH3BPF8 625 aa10.11□□□□□ -0.79
HDGFL3-204ENST00000563790 H3BQV1 296 aa10.11□□□□□ -0.79
HDGFL3-204ENST00000563790 UBFD1O14562 309 aaKnown RBP10.11□□□□□ -0.79
HDGFL3-204ENST00000563790 ITGAXP20702 1163 aa10.11□□□□□ -0.79
HDGFL3-204ENST00000563790 CDH3P22223 829 aa10.11□□□□□ -0.79
HDGFL3-204ENST00000563790 LMAN1P49257 510 aa10.11□□□□□ -0.79
HDGFL3-204ENST00000563790 RAB28P51157 221 aa10.11□□□□□ -0.79
HDGFL3-204ENST00000563790 AP2B1P63010 937 aa10.11□□□□□ -0.79
HDGFL3-204ENST00000563790 CMPK2Q5EBM0 449 aa10.11□□□□□ -0.79
HDGFL3-204ENST00000563790 BRMS1LQ5PSV4 323 aa10.11□□□□□ -0.79
HDGFL3-204ENST00000563790 RIPPLY2Q5TAB7 128 aa10.11□□□□□ -0.79
HDGFL3-204ENST00000563790 RRAGBQ5VZM2 374 aa10.11□□□□□ -0.79
HDGFL3-204ENST00000563790 FAM173BQ6P4H8 233 aa10.11□□□□□ -0.79
HDGFL3-204ENST00000563790 UNC5DQ6UXZ4 953 aa10.11□□□□□ -0.79
HDGFL3-204ENST00000563790 DNM1P46Q6ZS02 220 aa10.11□□□□□ -0.79
HDGFL3-204ENST00000563790 GPR150Q8NGU9 434 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms