RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 DAAM2Q86T65 1068 aa18.11■□□□□ 0.49
NME3-204ENST00000563498 ZC3H18Q86VM9 953 aaKnown RBP18.11■□□□□ 0.49
NME3-204ENST00000563498 LILRA3Q8N6C8 439 aaPredicted RBP18.11■□□□□ 0.49
NME3-204ENST00000563498 OR4K2Q8NGD2 314 aa18.11■□□□□ 0.49
NME3-204ENST00000563498 HEXDCQ8WVB3 486 aa18.11■□□□□ 0.49
NME3-204ENST00000563498 ULK4Q96C45 1275 aa18.11■□□□□ 0.49
NME3-204ENST00000563498 SNRNP40Q96DI7 357 aaKnown RBP18.11■□□□□ 0.49
NME3-204ENST00000563498 DCUN1D1Q96GG9 259 aa18.11■□□□□ 0.49
NME3-204ENST00000563498 QKIQ96PU8 341 aaKnown RBP eCLIP18.11■□□□□ 0.49
NME3-204ENST00000563498 C19orf43Q9BQ61 176 aa18.11■□□□□ 0.49
NME3-204ENST00000563498 SLC7A5P2Q9GIP4 190 aa18.11■□□□□ 0.49
NME3-204ENST00000563498 ZNHIT6Q9NWK9 470 aaKnown RBP18.11■□□□□ 0.49
NME3-204ENST00000563498 RSPH14Q9UHP6 348 aa18.11■□□□□ 0.49
NME3-204ENST00000563498 ERRFI1Q9UJM3 462 aaPredicted RBP18.11■□□□□ 0.49
NME3-204ENST00000563498 B3GNT3Q9Y2A9 372 aa18.11■□□□□ 0.49
NME3-204ENST00000563498 CENPEQ02224 2701 aa18.11■□□□□ 0.49
NME3-204ENST00000563498 PCSK5Q92824 1860 aa18.1■□□□□ 0.49
NME3-204ENST00000563498 BTN3A3O00478 584 aa18.1■□□□□ 0.49
NME3-204ENST00000563498 BTN3A1O00481 513 aa18.1■□□□□ 0.49
NME3-204ENST00000563498 ZNF749O43361 778 aa18.1■□□□□ 0.49
NME3-204ENST00000563498 PSTPIP1O43586 416 aa18.1■□□□□ 0.49
NME3-204ENST00000563498 SPOPO43791 374 aa18.1■□□□□ 0.49
NME3-204ENST00000563498 AGTP01019 485 aa18.1■□□□□ 0.49
NME3-204ENST00000563498 IGHEP01854 428 aa18.1■□□□□ 0.49
NME3-204ENST00000563498 ALPPP05187 535 aa18.1■□□□□ 0.49
NME3-204ENST00000563498 TPM3P06753 285 aa18.1■□□□□ 0.49
NME3-204ENST00000563498 TNNT1P13805 278 aa18.1■□□□□ 0.49
NME3-204ENST00000563498 CD151P48509 253 aa18.1■□□□□ 0.49
NME3-204ENST00000563498 XIAPP98170 497 aa18.1■□□□□ 0.49
NME3-204ENST00000563498 SSPNQ14714 243 aa18.1■□□□□ 0.49
NME3-204ENST00000563498 PLEKHN1Q494U1 663 aaPredicted RBP18.1■□□□□ 0.49
NME3-204ENST00000563498 TFDP3Q5H9I0 405 aa18.1■□□□□ 0.49
NME3-204ENST00000563498 KAZNQ674X7 775 aa18.1■□□□□ 0.49
NME3-204ENST00000563498 RANBP10Q6VN20 620 aa18.1■□□□□ 0.49
NME3-204ENST00000563498 MRGPREQ86SM8 312 aa18.1■□□□□ 0.49
NME3-204ENST00000563498 NAT14Q8WUY8 206 aa18.1■□□□□ 0.49
NME3-204ENST00000563498 C19orf60Q96EN9 201 aa18.1■□□□□ 0.49
NME3-204ENST00000563498 TCTN2Q96GX1 697 aa18.1■□□□□ 0.49
NME3-204ENST00000563498 FER1L6-AS2Q96M78 137 aa18.1■□□□□ 0.49
NME3-204ENST00000563498 TRAPPC9Q96Q05 1148 aa18.1■□□□□ 0.49
NME3-204ENST00000563498 FERD3LQ96RJ6 166 aa18.1■□□□□ 0.49
NME3-204ENST00000563498 OR52A5Q9H2C5 316 aa18.1■□□□□ 0.49
NME3-204ENST00000563498 MVB12BQ9H7P6 319 aa18.1■□□□□ 0.49
NME3-204ENST00000563498 FKBPLQ9UIM3 349 aa18.1■□□□□ 0.49
NME3-204ENST00000563498 CRLS1Q9UJA2 301 aa18.1■□□□□ 0.49
NME3-204ENST00000563498 HYOU1Q9Y4L1 999 aa18.1■□□□□ 0.49
NME3-204ENST00000563498 CREBBPQ92793 2442 aa18.09■□□□□ 0.49
NME3-204ENST00000563498 C2orf74A8MZ97 194 aa18.09■□□□□ 0.49
NME3-204ENST00000563498 CFAP99D6REC4 459 aa18.09■□□□□ 0.49
NME3-204ENST00000563498 IFRD1O00458 451 aaPredicted RBP18.09■□□□□ 0.49
NME3-204ENST00000563498 KRT86O43790 486 aa18.09■□□□□ 0.49
NME3-204ENST00000563498 ANXA9O76027 345 aa18.09■□□□□ 0.49
NME3-204ENST00000563498 CLDN1O95832 211 aa18.09■□□□□ 0.49
NME3-204ENST00000563498 CD63P08962 238 aa18.09■□□□□ 0.49
NME3-204ENST00000563498 SPTBP11277 2137 aa18.09■□□□□ 0.49
NME3-204ENST00000563498 DCTP40126 519 aa18.09■□□□□ 0.49
NME3-204ENST00000563498 LMAN1P49257 510 aa18.09■□□□□ 0.49
NME3-204ENST00000563498 GEMP55040 296 aa18.09■□□□□ 0.49
NME3-204ENST00000563498 TRIM14Q14142 442 aa18.09■□□□□ 0.49
NME3-204ENST00000563498 NR6A1Q15406 480 aa18.09■□□□□ 0.49
NME3-204ENST00000563498 SARM1Q6SZW1 724 aa18.09■□□□□ 0.49
NME3-204ENST00000563498 CDHR3Q6ZTQ4 885 aa18.09■□□□□ 0.49
NME3-204ENST00000563498 NXPE1Q8N323 547 aa18.09■□□□□ 0.49
NME3-204ENST00000563498 CLEC1AQ8NC01 280 aa18.09■□□□□ 0.49
NME3-204ENST00000563498 COPS8Q99627 209 aa18.09■□□□□ 0.49
NME3-204ENST00000563498 FICDQ9BVA6 458 aa18.09■□□□□ 0.49
NME3-204ENST00000563498 GBA3Q9H227 469 aa18.09■□□□□ 0.49
NME3-204ENST00000563498 COG4Q9H9E3 785 aa18.09■□□□□ 0.49
NME3-204ENST00000563498 SPTLC3Q9NUV7 552 aa18.09■□□□□ 0.49
NME3-204ENST00000563498 ASF1BQ9NVP2 202 aa18.09■□□□□ 0.49
NME3-204ENST00000563498 INTUQ9ULD6 942 aa18.09■□□□□ 0.49
NME3-204ENST00000563498 SLC5A6Q9Y289 635 aa18.09■□□□□ 0.49
NME3-204ENST00000563498 AP1M2Q9Y6Q5 423 aa18.09■□□□□ 0.49
NME3-204ENST00000563498 hCG_1818297A0A087WSY0 165 aa18.08■□□□□ 0.48
NME3-204ENST00000563498 SYCE3A1L190 88 aa18.08■□□□□ 0.48
NME3-204ENST00000563498 CCDC66A2RUB6 948 aa18.08■□□□□ 0.48
NME3-204ENST00000563498 ATP1B2P14415 290 aaPredicted RBP18.08■□□□□ 0.48
NME3-204ENST00000563498 OTX2P32243 289 aa18.08■□□□□ 0.48
NME3-204ENST00000563498 ADRA1AP35348 466 aa18.08■□□□□ 0.48
NME3-204ENST00000563498 RPA4Q13156 261 aa18.08■□□□□ 0.48
NME3-204ENST00000563498 RAPSNQ13702 412 aa18.08■□□□□ 0.48
NME3-204ENST00000563498 MYBPC3Q14896 1274 aa18.08■□□□□ 0.48
NME3-204ENST00000563498 LLGL1Q15334 1064 aa18.08■□□□□ 0.48
NME3-204ENST00000563498 ZNF658BQ4V348 819 aaPredicted RBP18.08■□□□□ 0.48
NME3-204ENST00000563498 ZRANB3Q5FWF4 1079 aa18.08■□□□□ 0.48
NME3-204ENST00000563498 DCAF10Q5QP82 559 aa18.08■□□□□ 0.48
NME3-204ENST00000563498 LYPLAL1Q5VWZ2 237 aa18.08■□□□□ 0.48
NME3-204ENST00000563498 ZNF787Q6DD87 383 aa18.08■□□□□ 0.48
NME3-204ENST00000563498 ITPRIPL1Q6GPH6 555 aa18.08■□□□□ 0.48
NME3-204ENST00000563498 AMIGO1Q86WK6 493 aa18.08■□□□□ 0.48
NME3-204ENST00000563498 GPR135Q8IZ08 494 aa18.08■□□□□ 0.48
NME3-204ENST00000563498 OR52E1Q8NGJ3 308 aa18.08■□□□□ 0.48
NME3-204ENST00000563498 RBM41Q96IZ5 413 aaKnown RBP18.08■□□□□ 0.48
NME3-204ENST00000563498 CCDC42Q96M95 316 aa18.08■□□□□ 0.48
NME3-204ENST00000563498 C5orf34Q96MH7 638 aa18.08■□□□□ 0.48
NME3-204ENST00000563498 BARD1Q99728 777 aaKnown RBP18.08■□□□□ 0.48
NME3-204ENST00000563498 GORASP1Q9BQQ3 440 aa18.08■□□□□ 0.48
NME3-204ENST00000563498 CHRNA10Q9GZZ6 450 aa18.08■□□□□ 0.48
NME3-204ENST00000563498 VPS37BQ9H9H4 285 aa18.08■□□□□ 0.48
NME3-204ENST00000563498 NHEJ1Q9H9Q4 299 aaPredicted RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms