RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 ASB11Q8WXH4 323 aa18.72■□□□□ 0.59
SMPD3-203ENST00000563226 ELMO1Q92556 727 aa18.72■□□□□ 0.59
SMPD3-203ENST00000563226 ERLEC1Q96DZ1 483 aa18.72■□□□□ 0.59
SMPD3-203ENST00000563226 SAMD11Q96NU1 681 aa18.72■□□□□ 0.59
SMPD3-203ENST00000563226 ZSCAN5AQ9BUG6 496 aa18.72■□□□□ 0.59
SMPD3-203ENST00000563226 SLC12A9Q9BXP2 914 aa18.72■□□□□ 0.59
SMPD3-203ENST00000563226 TRIM8Q9BZR9 551 aa18.72■□□□□ 0.59
SMPD3-203ENST00000563226 SFXN1Q9H9B4 322 aa18.72■□□□□ 0.59
SMPD3-203ENST00000563226 ZDHHC4Q9NPG8 344 aa18.72■□□□□ 0.59
SMPD3-203ENST00000563226 HPS4Q9NQG7 708 aa18.72■□□□□ 0.59
SMPD3-203ENST00000563226 NFKBIL1Q9UBC1 381 aaPredicted RBP18.72■□□□□ 0.59
SMPD3-203ENST00000563226 COQ6Q9Y2Z9 468 aa18.72■□□□□ 0.59
SMPD3-203ENST00000563226 EIF3FO00303 357 aaPredicted RBP18.71■□□□□ 0.59
SMPD3-203ENST00000563226 NME4O00746 187 aa18.71■□□□□ 0.59
SMPD3-203ENST00000563226 SLC22A3O75751 556 aa18.71■□□□□ 0.59
SMPD3-203ENST00000563226 CTSCP53634 463 aa18.71■□□□□ 0.59
SMPD3-203ENST00000563226 ACOX1Q15067 660 aa18.71■□□□□ 0.59
SMPD3-203ENST00000563226 TRIP10Q15642 601 aa18.71■□□□□ 0.59
SMPD3-203ENST00000563226 AAK1Q2M2I8 961 aa18.71■□□□□ 0.59
SMPD3-203ENST00000563226 RFTN2Q52LD8 501 aaPredicted RBP18.71■□□□□ 0.59
SMPD3-203ENST00000563226 SFT2D3Q587I9 215 aa18.71■□□□□ 0.59
SMPD3-203ENST00000563226 PAGE3Q5JUK9 113 aa18.71■□□□□ 0.59
SMPD3-203ENST00000563226 HABP4Q5JVS0 413 aaKnown RBP18.71■□□□□ 0.59
SMPD3-203ENST00000563226 PLEKHS1Q5SXH7 462 aa18.71■□□□□ 0.59
SMPD3-203ENST00000563226 C9orf64Q5T6V5 341 aa18.71■□□□□ 0.59
SMPD3-203ENST00000563226 ANO7Q6IWH7 933 aa18.71■□□□□ 0.59
SMPD3-203ENST00000563226 PQLC1Q8N2U9 271 aa18.71■□□□□ 0.59
SMPD3-203ENST00000563226 PROKR1Q8TCW9 393 aa18.71■□□□□ 0.59
SMPD3-203ENST00000563226 ARRDC3Q96B67 414 aa18.71■□□□□ 0.59
SMPD3-203ENST00000563226 FAM83CQ9BQN1 747 aa18.71■□□□□ 0.59
SMPD3-203ENST00000563226 PARVBQ9HBI1 364 aa18.71■□□□□ 0.59
SMPD3-203ENST00000563226 DEC1Q9P2X7 70 aa18.71■□□□□ 0.59
SMPD3-203ENST00000563226 KLQ9UEF7 1012 aa18.71■□□□□ 0.59
SMPD3-203ENST00000563226 CFAP99D6REC4 459 aa18.7■□□□□ 0.58
SMPD3-203ENST00000563226 MPC1LP0DKB6 136 aa18.7■□□□□ 0.58
SMPD3-203ENST00000563226 EPB42P16452 691 aa18.7■□□□□ 0.58
SMPD3-203ENST00000563226 FCARP24071 287 aa18.7■□□□□ 0.58
SMPD3-203ENST00000563226 CLNS1AP54105 237 aaKnown RBP18.7■□□□□ 0.58
SMPD3-203ENST00000563226 KCNK10P57789 538 aa18.7■□□□□ 0.58
SMPD3-203ENST00000563226 GRIK2Q13002 908 aa18.7■□□□□ 0.58
SMPD3-203ENST00000563226 ZNF284Q2VY69 593 aa18.7■□□□□ 0.58
SMPD3-203ENST00000563226 SAMD4BQ5PRF9 694 aaKnown RBP18.7■□□□□ 0.58
SMPD3-203ENST00000563226 LILRA2Q8N149 483 aa18.7■□□□□ 0.58
SMPD3-203ENST00000563226 BTN2A2Q8WVV5 523 aa18.7■□□□□ 0.58
SMPD3-203ENST00000563226 P2RY13Q9BPV8 354 aa18.7■□□□□ 0.58
SMPD3-203ENST00000563226 NTMT1Q9BV86 223 aa18.7■□□□□ 0.58
SMPD3-203ENST00000563226 ACTL8Q9H568 366 aa18.7■□□□□ 0.58
SMPD3-203ENST00000563226 HEBP1Q9NRV9 189 aa18.7■□□□□ 0.58
SMPD3-203ENST00000563226 LRCH1Q9Y2L9 728 aa18.7■□□□□ 0.58
SMPD3-203ENST00000563226 POLR3HQ9Y535 204 aaPredicted RBP18.7■□□□□ 0.58
SMPD3-203ENST00000563226 A0A1W2PP18 115 aa18.7■□□□□ 0.58
SMPD3-203ENST00000563226 EPOPA6NHQ4 379 aa18.7■□□□□ 0.58
SMPD3-203ENST00000563226 CASQ2O14958 399 aaPredicted RBP18.7■□□□□ 0.58
SMPD3-203ENST00000563226 INPP4BO15327 924 aa18.7■□□□□ 0.58
SMPD3-203ENST00000563226 PAPLNO95428 1278 aa18.7■□□□□ 0.58
SMPD3-203ENST00000563226 C8GP07360 202 aa18.7■□□□□ 0.58
SMPD3-203ENST00000563226 G6PDP11413 515 aa18.7■□□□□ 0.58
SMPD3-203ENST00000563226 NFKBIAP25963 317 aa18.7■□□□□ 0.58
SMPD3-203ENST00000563226 POLR2JP52435 117 aaKnown RBP18.7■□□□□ 0.58
SMPD3-203ENST00000563226 AP5B1Q2VPB7 878 aa18.7■□□□□ 0.58
SMPD3-203ENST00000563226 TIGD2Q4W5G0 525 aa18.7■□□□□ 0.58
SMPD3-203ENST00000563226 ERAP2Q6P179 960 aa18.7■□□□□ 0.58
SMPD3-203ENST00000563226 LILRA3Q8N6C8 439 aaPredicted RBP18.7■□□□□ 0.58
SMPD3-203ENST00000563226 RASGEF1AQ8N9B8 481 aa18.7■□□□□ 0.58
SMPD3-203ENST00000563226 HCAR2Q8TDS4 363 aa18.7■□□□□ 0.58
SMPD3-203ENST00000563226 AP2M1Q96CW1 435 aa18.7■□□□□ 0.58
SMPD3-203ENST00000563226 LRRC58Q96CX6 371 aa18.7■□□□□ 0.58
SMPD3-203ENST00000563226 ZIM2Q9NZV7 527 aa18.7■□□□□ 0.58
SMPD3-203ENST00000563226 ABCD2Q9UBJ2 740 aa18.7■□□□□ 0.58
SMPD3-203ENST00000563226 BCAP29Q9UHQ4 241 aa18.7■□□□□ 0.58
SMPD3-203ENST00000563226 GFYI3L273 518 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 TSPAN6O43657 245 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 EBLN1P0CF75 366 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 IRX1P78414 480 aaPredicted RBP18.69■□□□□ 0.58
SMPD3-203ENST00000563226 HMGCS1Q01581 520 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 EMX2Q04743 252 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 HNRNPA1L2Q32P51 320 aaKnown RBP18.69■□□□□ 0.58
SMPD3-203ENST00000563226 PLA2G4EQ3MJ16 856 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 SGO1Q5FBB7 561 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 IL23RQ5VWK5 629 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 TANGO2Q6ICL3 276 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 CYP2R1Q6VVX0 501 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 SLC15A3Q8IY34 581 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 KIAA1958Q8N8K9 716 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 PIP4K2CQ8TBX8 421 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 UCMAQ8WVF2 138 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 FOXJ1Q92949 421 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 GLYATL1Q969I3 302 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 PYCR2Q96C36 320 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 IGFLR1Q9H665 355 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 COPS7BQ9H9Q2 264 aaPredicted RBP18.69■□□□□ 0.58
SMPD3-203ENST00000563226 MRPL40Q9NQ50 206 aaKnown RBP18.69■□□□□ 0.58
SMPD3-203ENST00000563226 CMTM6Q9NX76 183 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 TRPS1Q9UHF7 1281 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 UNC80Q8N2C7 3258 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 XIRP2A4UGR9 3374 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 PRSS51A0A1B0GVH4 220 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 RSL1D1O76021 490 aaKnown RBP18.69■□□□□ 0.58
SMPD3-203ENST00000563226 AP2A2O94973 939 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 PRNPP04156 253 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms