RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 CCDC28BQ9BUN5 200 aa17.66■□□□□ 0.42
COMMD4-208ENST00000563220 CD244Q9BZW8 370 aa17.66■□□□□ 0.42
COMMD4-208ENST00000563220 ARL15Q9NXU5 204 aa17.66■□□□□ 0.42
COMMD4-208ENST00000563220 WWOXQ9NZC7 414 aa17.66■□□□□ 0.42
COMMD4-208ENST00000563220 DUSP12Q9UNI6 340 aa17.66■□□□□ 0.42
COMMD4-208ENST00000563220 NCKAP1Q9Y2A7 1128 aa17.66■□□□□ 0.42
COMMD4-208ENST00000563220 PRKAB1Q9Y478 270 aa17.66■□□□□ 0.42
COMMD4-208ENST00000563220 OR1A2Q9Y585 309 aa17.66■□□□□ 0.42
COMMD4-208ENST00000563220 NUMA1Q14980 2115 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 ANKRD12Q6UB98 2062 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 KRT87PA6NCN2 255 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 MAN2B1O00754 1011 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 ANXA5P08758 320 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 ENO2P09104 434 aaPredicted RBP17.65■□□□□ 0.42
COMMD4-208ENST00000563220 CHRNB1P11230 501 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 ACADMP11310 421 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 GABRG2P18507 467 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 INHBCP55103 352 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 PPP2CBP62714 309 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 PPP2CAP67775 309 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 SP140Q13342 867 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 RBBP7Q16576 425 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 METTL21CQ5VZV1 264 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 KANK2Q63ZY3 851 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 ACAD11Q709F0 780 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 KBTBD6Q86V97 674 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 SLC22A15Q8IZD6 547 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 KIRREL3Q8IZU9 778 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 ZNF687Q8N1G0 1237 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 TEX9Q8N6V9 391 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 OR52B6Q8NGF0 335 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 CFAP61Q8NHU2 1237 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 UBTD2Q8WUN7 234 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 PTCD3Q96EY7 689 aaKnown RBP17.65■□□□□ 0.42
COMMD4-208ENST00000563220 NSL1Q96IY1 281 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 NOL11Q9H8H0 719 aaKnown RBP17.65■□□□□ 0.42
COMMD4-208ENST00000563220 PREBQ9HCU5 417 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 TXLNGQ9NUQ3 528 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 CA14Q9ULX7 337 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 SORCS3Q9UPU3 1222 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 CFAP73A6NFT4 308 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 OR7A17O14581 309 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 CHUKO15111 745 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 CCNT2O60583 730 aaKnown RBP17.65■□□□□ 0.42
COMMD4-208ENST00000563220 ATP5HO75947 161 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 ESRRBO95718 433 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 TEAD1P28347 426 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 CDKL1Q00532 357 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 GTF2H2Q13888 395 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 MAP7D1Q3KQU3 841 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 TMEM31Q5JXX7 168 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 CDKL4Q5MAI5 379 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 TMEM198Q66K66 360 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 NXNQ6DKJ4 435 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 GTF2H2CQ6P1K8 395 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 ZNF852Q6ZMS4 543 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 DCBLD1Q8N8Z6 715 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 FLCNQ8NFG4 579 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 SLC7A6OSQ96CW6 309 aaPredicted RBP17.65■□□□□ 0.42
COMMD4-208ENST00000563220 C3orf30Q96M34 536 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 CDK15Q96Q40 435 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 TRIM54Q9BYV2 358 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 TIMM22Q9Y584 194 aa17.65■□□□□ 0.42
COMMD4-208ENST00000563220 C17orf113A0A1B0GUU1 675 aa17.64■□□□□ 0.41
COMMD4-208ENST00000563220 LIN7AO14910 233 aaPredicted RBP17.64■□□□□ 0.41
COMMD4-208ENST00000563220 PSIP1O75475 530 aaKnown RBP17.64■□□□□ 0.41
COMMD4-208ENST00000563220 GSTM1P09488 218 aa17.64■□□□□ 0.41
COMMD4-208ENST00000563220 HIST1H2AGP0C0S8 130 aaPredicted RBP17.64■□□□□ 0.41
COMMD4-208ENST00000563220 HIST1H2ADP20671 130 aa17.64■□□□□ 0.41
COMMD4-208ENST00000563220 ACSL1P33121 698 aa17.64■□□□□ 0.41
COMMD4-208ENST00000563220 TPMTP51580 245 aa17.64■□□□□ 0.41
COMMD4-208ENST00000563220 ERVPABLB-1P60509 514 aa17.64■□□□□ 0.41
COMMD4-208ENST00000563220 GSTM4Q03013 218 aa17.64■□□□□ 0.41
COMMD4-208ENST00000563220 PLA2G4EQ3MJ16 856 aa17.64■□□□□ 0.41
COMMD4-208ENST00000563220 CYB5D1Q6P9G0 228 aa17.64■□□□□ 0.41
COMMD4-208ENST00000563220 ASRGL1Q7L266 308 aa17.64■□□□□ 0.41
COMMD4-208ENST00000563220 OR2L2Q8NH16 312 aa17.64■□□□□ 0.41
COMMD4-208ENST00000563220 MCOLN3Q8TDD5 553 aa17.64■□□□□ 0.41
COMMD4-208ENST00000563220 HIST1H2AHQ96KK5 128 aa17.64■□□□□ 0.41
COMMD4-208ENST00000563220 ZNF382Q96SR6 550 aa17.64■□□□□ 0.41
COMMD4-208ENST00000563220 HIST1H2AJQ99878 128 aa17.64■□□□□ 0.41
COMMD4-208ENST00000563220 H2AFJQ9BTM1 129 aa17.64■□□□□ 0.41
COMMD4-208ENST00000563220 TUBB1Q9H4B7 451 aa17.64■□□□□ 0.41
COMMD4-208ENST00000563220 WDR26Q9H7D7 661 aa17.64■□□□□ 0.41
COMMD4-208ENST00000563220 FZD3Q9NPG1 666 aa17.64■□□□□ 0.41
COMMD4-208ENST00000563220 PTGDR2Q9Y5Y4 395 aa17.64■□□□□ 0.41
COMMD4-208ENST00000563220 ARHGEF33A8MVX0 844 aa17.63■□□□□ 0.41
COMMD4-208ENST00000563220 SLC31A1O15431 190 aa17.63■□□□□ 0.41
COMMD4-208ENST00000563220 OR4F21O95013 312 aa17.63■□□□□ 0.41
COMMD4-208ENST00000563220 ENO1P06733 434 aaKnown RBP17.63■□□□□ 0.41
COMMD4-208ENST00000563220 CYP2A7P20853 494 aa17.63■□□□□ 0.41
COMMD4-208ENST00000563220 IGFALSP35858 605 aa17.63■□□□□ 0.41
COMMD4-208ENST00000563220 GGT5P36269 586 aa17.63■□□□□ 0.41
COMMD4-208ENST00000563220 NFE2L1Q14494 772 aa17.63■□□□□ 0.41
COMMD4-208ENST00000563220 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.63■□□□□ 0.41
COMMD4-208ENST00000563220 NEK5Q6P3R8 708 aa17.63■□□□□ 0.41
COMMD4-208ENST00000563220 FAM83HQ6ZRV2 1179 aaPredicted RBP17.63■□□□□ 0.41
COMMD4-208ENST00000563220 GPRIN3Q6ZVF9 776 aa17.63■□□□□ 0.41
COMMD4-208ENST00000563220 CEP70Q8NHQ1 597 aa17.63■□□□□ 0.41
COMMD4-208ENST00000563220 MAGEC3Q8TD91 643 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms