RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 PRAMEP78395 509 aa16.39■□□□□ 0.21
CLK3-210ENST00000563112 PLOD1Q02809 727 aaPredicted RBP16.39■□□□□ 0.21
CLK3-210ENST00000563112 KCNAB1Q14722 419 aa16.39■□□□□ 0.21
CLK3-210ENST00000563112 FASTKD1Q53R41 847 aaKnown RBP16.39■□□□□ 0.21
CLK3-210ENST00000563112 PACS1Q6VY07 963 aa16.39■□□□□ 0.21
CLK3-210ENST00000563112 PRUNE1Q86TP1 453 aa16.39■□□□□ 0.21
CLK3-210ENST00000563112 D2HGDHQ8N465 521 aa16.39■□□□□ 0.21
CLK3-210ENST00000563112 PHC3Q8NDX5 983 aa16.39■□□□□ 0.21
CLK3-210ENST00000563112 OR13J1Q8NGT2 312 aa16.39■□□□□ 0.21
CLK3-210ENST00000563112 OR4L1Q8NH43 312 aa16.39■□□□□ 0.21
CLK3-210ENST00000563112 ELMO1Q92556 727 aa16.39■□□□□ 0.21
CLK3-210ENST00000563112 TFGQ92734 400 aaPredicted RBP16.39■□□□□ 0.21
CLK3-210ENST00000563112 PEX13Q92968 403 aa16.39■□□□□ 0.21
CLK3-210ENST00000563112 TFB2MQ9H5Q4 396 aaKnown RBP16.39■□□□□ 0.21
CLK3-210ENST00000563112 FGF21Q9NSA1 209 aa16.39■□□□□ 0.21
CLK3-210ENST00000563112 SOHLH2Q9NX45 425 aa16.39■□□□□ 0.21
CLK3-210ENST00000563112 IL17BQ9UHF5 180 aa16.39■□□□□ 0.21
CLK3-210ENST00000563112 ANAPC5Q9UJX4 755 aa16.39■□□□□ 0.21
CLK3-210ENST00000563112 PADI1Q9ULC6 663 aa16.39■□□□□ 0.21
CLK3-210ENST00000563112 PCDHB3Q9Y5E6 796 aa16.39■□□□□ 0.21
CLK3-210ENST00000563112 HEMK1Q9Y5R4 338 aaPredicted RBP16.39■□□□□ 0.21
CLK3-210ENST00000563112 PRSS21Q9Y6M0 314 aa16.39■□□□□ 0.21
CLK3-210ENST00000563112 GSAPA4D1B5 854 aa16.38■□□□□ 0.21
CLK3-210ENST00000563112 GOT2P00505 430 aaKnown RBP16.38■□□□□ 0.21
CLK3-210ENST00000563112 ZSCAN5DPP0CG00 497 aa16.38■□□□□ 0.21
CLK3-210ENST00000563112 PRKAR1AP10644 381 aa16.38■□□□□ 0.21
CLK3-210ENST00000563112 PLA2G2AP14555 144 aa16.38■□□□□ 0.21
CLK3-210ENST00000563112 DLSTP36957 453 aa16.38■□□□□ 0.21
CLK3-210ENST00000563112 KPNA2P52292 529 aaKnown RBP16.38■□□□□ 0.21
CLK3-210ENST00000563112 TUBB4BP68371 445 aa16.38■□□□□ 0.21
CLK3-210ENST00000563112 TUBB2AQ13885 445 aa16.38■□□□□ 0.21
CLK3-210ENST00000563112 SIX1Q15475 284 aaPredicted RBP16.38■□□□□ 0.21
CLK3-210ENST00000563112 ZNF658BQ4V348 819 aaPredicted RBP16.38■□□□□ 0.21
CLK3-210ENST00000563112 SYTL3Q4VX76 610 aa16.38■□□□□ 0.21
CLK3-210ENST00000563112 PCID2Q5JVF3 399 aa16.38■□□□□ 0.21
CLK3-210ENST00000563112 MICALCLQ6ZW33 695 aa16.38■□□□□ 0.21
CLK3-210ENST00000563112 GLIS1Q8NBF1 620 aa16.38■□□□□ 0.21
CLK3-210ENST00000563112 OR8K5Q8NH50 307 aa16.38■□□□□ 0.21
CLK3-210ENST00000563112 STARD8Q92502 1023 aa16.38■□□□□ 0.21
CLK3-210ENST00000563112 RNF31Q96EP0 1072 aa16.38■□□□□ 0.21
CLK3-210ENST00000563112 TUBB2BQ9BVA1 445 aa16.38■□□□□ 0.21
CLK3-210ENST00000563112 TSSK1BQ9BXA7 367 aa16.38■□□□□ 0.21
CLK3-210ENST00000563112 TLR10Q9BXR5 811 aa16.38■□□□□ 0.21
CLK3-210ENST00000563112 FAM117AQ9C073 453 aa16.38■□□□□ 0.21
CLK3-210ENST00000563112 ADNPQ9H2P0 1102 aa16.38■□□□□ 0.21
CLK3-210ENST00000563112 EIF2B3Q9NR50 452 aaKnown RBP16.38■□□□□ 0.21
CLK3-210ENST00000563112 C1GALT1Q9NS00 363 aa16.38■□□□□ 0.21
CLK3-210ENST00000563112 SLC2A6Q9UGQ3 507 aa16.38■□□□□ 0.21
CLK3-210ENST00000563112 KCND3Q9UK17 655 aa16.38■□□□□ 0.21
CLK3-210ENST00000563112 POMT2Q9UKY4 750 aa16.38■□□□□ 0.21
CLK3-210ENST00000563112 PPP2R2CQ9Y2T4 447 aa16.38■□□□□ 0.21
CLK3-210ENST00000563112 TCAF1Q9Y4C2 921 aa16.38■□□□□ 0.21
CLK3-210ENST00000563112 KATNA1O75449 491 aa16.37■□□□□ 0.21
CLK3-210ENST00000563112 BASP1P80723 227 aaKnown RBP16.37■□□□□ 0.21
CLK3-210ENST00000563112 CCZ1BP86790 482 aa16.37■□□□□ 0.21
CLK3-210ENST00000563112 CCZ1P86791 482 aaPredicted RBP16.37■□□□□ 0.21
CLK3-210ENST00000563112 ACVR1Q04771 509 aa16.37■□□□□ 0.21
CLK3-210ENST00000563112 CDC20Q12834 499 aa16.37■□□□□ 0.21
CLK3-210ENST00000563112 NFATC3Q12968 1075 aa16.37■□□□□ 0.21
CLK3-210ENST00000563112 PRKG2Q13237 762 aa16.37■□□□□ 0.21
CLK3-210ENST00000563112 BOP1Q14137 746 aaKnown RBP16.37■□□□□ 0.21
CLK3-210ENST00000563112 CRTC2Q53ET0 693 aaPredicted RBP16.37■□□□□ 0.21
CLK3-210ENST00000563112 AARS2Q5JTZ9 985 aaKnown RBP16.37■□□□□ 0.21
CLK3-210ENST00000563112 PWWP2BQ6NUJ5 590 aa16.37■□□□□ 0.21
CLK3-210ENST00000563112 C16orf46Q6P387 395 aa16.37■□□□□ 0.21
CLK3-210ENST00000563112 AMIGO1Q86WK6 493 aa16.37■□□□□ 0.21
CLK3-210ENST00000563112 OR52E1Q8NGJ3 308 aa16.37■□□□□ 0.21
CLK3-210ENST00000563112 FANCEQ9HB96 536 aa16.37■□□□□ 0.21
CLK3-210ENST00000563112 KCND1Q9NSA2 647 aa16.37■□□□□ 0.21
CLK3-210ENST00000563112 GEMIN8Q9NWZ8 242 aaKnown RBP16.37■□□□□ 0.21
CLK3-210ENST00000563112 BFARQ9NZS9 450 aa16.37■□□□□ 0.21
CLK3-210ENST00000563112 CROTQ9UKG9 612 aa16.37■□□□□ 0.21
CLK3-210ENST00000563112 ASF1AQ9Y294 204 aa16.37■□□□□ 0.21
CLK3-210ENST00000563112 BTRCQ9Y297 605 aa16.37■□□□□ 0.21
CLK3-210ENST00000563112 SLC9B1P1A6NJY1 282 aa16.36■□□□□ 0.21
CLK3-210ENST00000563112 C2orf74A8MZ97 194 aa16.36■□□□□ 0.21
CLK3-210ENST00000563112 KDM1AO60341 852 aa16.36■□□□□ 0.21
CLK3-210ENST00000563112 PRDX3P30048 256 aaKnown RBP16.36■□□□□ 0.21
CLK3-210ENST00000563112 NPY2RP49146 381 aa16.36■□□□□ 0.21
CLK3-210ENST00000563112 SESN2P58004 480 aaPredicted RBP16.36■□□□□ 0.21
CLK3-210ENST00000563112 BRD3Q15059 726 aa16.36■□□□□ 0.21
CLK3-210ENST00000563112 HOOK3Q86VS8 718 aa16.36■□□□□ 0.21
CLK3-210ENST00000563112 TMEM126BQ8IUX1 230 aa16.36■□□□□ 0.21
CLK3-210ENST00000563112 SGSM3Q96HU1 749 aa16.36■□□□□ 0.21
CLK3-210ENST00000563112 ZNF778Q96MU6 729 aa16.36■□□□□ 0.21
CLK3-210ENST00000563112 HGH1Q9BTY7 390 aa16.36■□□□□ 0.21
CLK3-210ENST00000563112 IL22Q9GZX6 179 aa16.36■□□□□ 0.21
CLK3-210ENST00000563112 SYTL2Q9HCH5 934 aa16.36■□□□□ 0.21
CLK3-210ENST00000563112 LHX9Q9NQ69 397 aa16.36■□□□□ 0.21
CLK3-210ENST00000563112 POLG2Q9UHN1 485 aa16.36■□□□□ 0.21
CLK3-210ENST00000563112 BTN3A3O00478 584 aa16.35■□□□□ 0.21
CLK3-210ENST00000563112 BTN3A1O00481 513 aa16.35■□□□□ 0.21
CLK3-210ENST00000563112 OR1I1O60431 355 aa16.35■□□□□ 0.21
CLK3-210ENST00000563112 SCRG1O75711 98 aa16.35■□□□□ 0.21
CLK3-210ENST00000563112 TIAF1O95411 115 aa16.35■□□□□ 0.21
CLK3-210ENST00000563112 NTRK1P04629 796 aa16.35■□□□□ 0.21
CLK3-210ENST00000563112 CXCR5P32302 372 aa16.35■□□□□ 0.21
CLK3-210ENST00000563112 KCNJ1P48048 391 aa16.35■□□□□ 0.21
CLK3-210ENST00000563112 POLE2P56282 527 aa16.35■□□□□ 0.21
CLK3-210ENST00000563112 GPR19Q15760 415 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms