RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 PDE10AQ9Y233 779 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 POLR3HQ9Y535 204 aaPredicted RBP9.61□□□□□ -0.87
SMG1-205ENST00000561947 LAMA2P24043 3122 aaKnown RBP9.61□□□□□ -0.87
SMG1-205ENST00000561947 DPPA5A6NC42 116 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 GRXCR2A6NFK2 248 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 LOC730098B7Z3J9 87 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 CFAP99D6REC4 459 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 SLC28A1O00337 649 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 FFAR3O14843 346 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 PER2O15055 1255 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 GPR42O15529 346 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 RGS14O43566 566 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 ASLP04424 464 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 G6PDP11413 515 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 ADH5P11766 374 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 SYN1P17600 705 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 GGT5P36269 586 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 DGKGP49619 791 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 YBX1P67809 324 aaKnown RBP9.61□□□□□ -0.87
SMG1-205ENST00000561947 CREB5Q02930 508 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 HSPA14Q0VDF9 509 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 SMU1Q2TAY7 513 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 ZNF805Q5CZA5 627 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 PLEKHS1Q5SXH7 462 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 Q6ZVL8 140 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 DPPA4Q7L190 304 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 UBE2Q1Q7Z7E8 422 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 TCAIMQ8N3R3 496 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 TRAM1L1Q8N609 369 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 ITFG1Q8TB96 612 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 WFIKKN2Q8TEU8 576 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 MIEF2Q96C03 454 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 LRIG1Q96JA1 1093 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 LRRC3BQ96PB8 259 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 UHRF1Q96T88 793 aaPredicted RBP9.61□□□□□ -0.87
SMG1-205ENST00000561947 MTG2Q9H4K7 406 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 ACTL8Q9H568 366 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 SLC32A1Q9H598 525 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 PARVBQ9HBI1 364 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 DUS2Q9NX74 493 aaKnown RBP9.61□□□□□ -0.87
SMG1-205ENST00000561947 DKK3Q9UBP4 350 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 KLQ9UEF7 1012 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 DPP7Q9UHL4 492 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 RNF11Q9Y3C5 154 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 PDE4DIPQ5VU43 2346 aa9.61□□□□□ -0.87
SMG1-205ENST00000561947 MANBAO00462 879 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 ANKRD28O15084 1053 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 KPNA5O15131 536 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 MTX2O75431 263 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 AP2A2O94973 939 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 RB1P06400 928 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 XPAP23025 273 aaPredicted RBP9.6□□□□□ -0.87
SMG1-205ENST00000561947 ETV3P41162 512 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 RPL38P63173 70 aaKnown RBP9.6□□□□□ -0.87
SMG1-205ENST00000561947 FOLH1Q04609 750 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 SP140Q13342 867 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 BOP1Q14137 746 aaKnown RBP9.6□□□□□ -0.87
SMG1-205ENST00000561947 RFTN2Q52LD8 501 aaPredicted RBP9.6□□□□□ -0.87
SMG1-205ENST00000561947 TCEAL5Q5H9L2 206 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 HENMT1Q5T8I9 393 aaKnown RBP9.6□□□□□ -0.87
SMG1-205ENST00000561947 LCN8Q6JVE9 175 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 SERPINA13PQ6UXR4 307 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 LRRC70Q7Z2Q7 622 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 VRK3Q8IV63 474 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 HCAR2Q8TDS4 363 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 ASB11Q8WXH4 323 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 EFHD1Q9BUP0 239 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 SLC29A3Q9BZD2 475 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 CNOT6Q9ULM6 557 aaKnown RBP9.6□□□□□ -0.87
SMG1-205ENST00000561947 PRRC2BQ5JSZ5 2229 aaKnown RBP9.6□□□□□ -0.87
SMG1-205ENST00000561947 AQP12BA6NM10 295 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 ZNF839A8K0R7 811 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 IFRD1O00458 451 aaPredicted RBP9.6□□□□□ -0.87
SMG1-205ENST00000561947 SLC16A5O15375 505 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 HOXC11O43248 304 aaPredicted RBP9.6□□□□□ -0.87
SMG1-205ENST00000561947 SGTAO43765 313 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 ULK1O75385 1050 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 NPPAP01160 153 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 SLC2A4P14672 509 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 JAK1P23458 1154 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 GRIA3P42263 894 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 HABP4Q5JVS0 413 aaKnown RBP9.6□□□□□ -0.87
SMG1-205ENST00000561947 CAPRIN2Q6IMN6 1127 aaKnown RBP9.6□□□□□ -0.87
SMG1-205ENST00000561947 NEK10Q6ZWH5 1172 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 TRIM46Q7Z4K8 759 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 C12orf40Q86WS4 652 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 APLFQ8IW19 511 aaPredicted RBP9.6□□□□□ -0.87
SMG1-205ENST00000561947 AQP12AQ8IXF9 295 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 DPP10Q8N608 796 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 DDHD1Q8NEL9 900 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 DNAJB14Q8TBM8 379 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 OSCP1Q8WVF1 389 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 SKA2Q8WVK7 121 aaPredicted RBP9.6□□□□□ -0.87
SMG1-205ENST00000561947 LRTOMTQ8WZ04 291 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 TIFAQ96CG3 184 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 RSPRY1Q96DX4 576 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 ZSCAN5AQ9BUG6 496 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 RIOK2Q9BVS4 552 aaKnown RBP9.6□□□□□ -0.87
SMG1-205ENST00000561947 MUC13Q9H3R2 512 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 PIDD1Q9HB75 910 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms