RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 E5RI56 91 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 KPNA3O00505 521 aaPredicted RBP6.41□□□□□ -1.38
CAPN3-210ENST00000561817 E2F3O00716 465 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 WNT9AO14904 365 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 TAPBPO15533 448 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 AP1G1O43747 822 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 NUAK1O60285 661 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 LILRB5O75023 590 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 GPC4O75487 556 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 AP2A2O94973 939 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 RASGRP1O95267 797 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 TRIM16O95361 564 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 APODP05090 189 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 KRT16P08779 473 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 CBSLP0DN79 551 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 BMP4P12644 408 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 ATP1B2P14415 290 aaPredicted RBP6.41□□□□□ -1.38
CAPN3-210ENST00000561817 NQO1P15559 274 aaKnown RBP6.41□□□□□ -1.38
CAPN3-210ENST00000561817 TSPAN8P19075 237 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 DGKAP23743 735 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 EEF1DP29692 281 aaKnown RBP6.41□□□□□ -1.38
CAPN3-210ENST00000561817 CBSP35520 551 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 P2RY2P41231 377 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 ALDH18A1P54886 795 aaKnown RBP6.41□□□□□ -1.38
CAPN3-210ENST00000561817 CDH13P55290 713 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 TAS2R38P59533 333 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 ARHGAP8P85298 464 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 SATB1Q01826 763 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 ZBTB16Q05516 673 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 BTKQ06187 659 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 DPTQ07507 201 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 CNTN1Q12860 1018 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 UBAP2LQ14157 1087 aaKnown RBP6.41□□□□□ -1.38
CAPN3-210ENST00000561817 NAA25Q14CX7 972 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 PCBP2Q15366 365 aaKnown RBP eCLIP6.41□□□□□ -1.38
CAPN3-210ENST00000561817 TGFBIQ15582 683 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 PHKG1Q16816 387 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 ZXDCQ2QGD7 858 aaPredicted RBP6.41□□□□□ -1.38
CAPN3-210ENST00000561817 C18orf21Q32NC0 220 aaPredicted RBP6.41□□□□□ -1.38
CAPN3-210ENST00000561817 LSM12Q3MHD2 195 aaKnown RBP6.41□□□□□ -1.38
CAPN3-210ENST00000561817 CFAP157Q5JU67 520 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 SH2D4BQ5SQS7 431 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 ZNF648Q5T619 568 aaPredicted RBP6.41□□□□□ -1.38
CAPN3-210ENST00000561817 AGBL4Q5VU57 503 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 METTL21CQ5VZV1 264 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 SEL1L3Q68CR1 1132 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 CHSY3Q70JA7 882 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 MTSS1LQ765P7 747 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 ERN2Q76MJ5 926 aaKnown RBP6.41□□□□□ -1.38
CAPN3-210ENST00000561817 ADAMTSL2Q86TH1 951 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 GPSM1Q86YR5 675 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 VRK3Q8IV63 474 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 FBXO39Q8N4B4 442 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 AADATQ8N5Z0 425 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 RASGEF1AQ8N9B8 481 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 FBXO27Q8NI29 283 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 ACTRT2Q8TDY3 377 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 AGAP11Q8TF27 550 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 UBTD2Q8WUN7 234 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 UCMAQ8WVF2 138 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 EDARADDQ8WWZ3 215 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 GLYATL1Q969I3 302 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 FAR2Q96K12 515 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 NECTIN4Q96NY8 510 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 ASB2Q96Q27 587 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 TUBB6Q9BUF5 446 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 ZSCAN5AQ9BUG6 496 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 SPATA16Q9BXB7 569 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 NUF2Q9BZD4 464 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 TUBB1Q9H4B7 451 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 WDR55Q9H6Y2 383 aaPredicted RBP6.41□□□□□ -1.38
CAPN3-210ENST00000561817 MEAF6Q9HAF1 191 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 RDH14Q9HBH5 336 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 SLC40A1Q9NP59 571 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 SARS2Q9NP81 518 aaKnown RBP6.41□□□□□ -1.38
CAPN3-210ENST00000561817 TRPV5Q9NQA5 729 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 KCTD5Q9NXV2 234 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 NUDT4Q9NZJ9 180 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 GULP1Q9UBP9 304 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 PTBP2Q9UKA9 531 aaKnown RBP6.41□□□□□ -1.38
CAPN3-210ENST00000561817 RNF112Q9ULX5 631 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 GTF2A1LQ9UNN4 478 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 TRAF6Q9Y4K3 522 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 OARD1Q9Y530 152 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 FADS3Q9Y5Q0 445 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 CAPN7Q9Y6W3 813 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 ANKRD12Q6UB98 2062 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 MYO10Q9HD67 2058 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 XIRP2A4UGR9 3374 aa6.41□□□□□ -1.38
CAPN3-210ENST00000561817 UNC80Q8N2C7 3258 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 A0A1W2PQF6 199 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 SLC5A10A0PJK1 596 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 TMEM202A6NGA9 273 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 SUPT3HB4E1H0 165 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 C2CD4DB7Z1M9 353 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 C10orf142B7Z368 130 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 SHISA8B8ZZ34 492 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 GFYI3L273 518 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 K7ESM1 405 aa6.4□□□□□ -1.38
CAPN3-210ENST00000561817 NPC1O15118 1278 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms