RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 TNFSF14O43557 240 aa2.02□□□□□ -2.09
SPG11-222ENST00000560435 DFFBO76075 338 aa2.02□□□□□ -2.09
SPG11-222ENST00000560435 PSMC4P43686 418 aa2.02□□□□□ -2.09
SPG11-222ENST00000560435 F2RL1P55085 397 aa2.02□□□□□ -2.09
SPG11-222ENST00000560435 EIF3BP55884 814 aaKnown RBP2.02□□□□□ -2.09
SPG11-222ENST00000560435 HERV-K104P61576 105 aa2.02□□□□□ -2.09
SPG11-222ENST00000560435 NDPQ00604 133 aa2.02□□□□□ -2.09
SPG11-222ENST00000560435 PTP4A2Q12974 167 aa2.02□□□□□ -2.09
SPG11-222ENST00000560435 C3AR1Q16581 482 aa2.02□□□□□ -2.09
SPG11-222ENST00000560435 MTHFSDQ2M296 383 aaKnown RBP2.02□□□□□ -2.09
SPG11-222ENST00000560435 LYSMD4Q5XG99 296 aa2.02□□□□□ -2.09
SPG11-222ENST00000560435 KIF6Q6ZMV9 814 aa2.02□□□□□ -2.09
SPG11-222ENST00000560435 ZNF841Q6ZN19 808 aa2.02□□□□□ -2.09
SPG11-222ENST00000560435 SEPT14Q6ZU15 432 aa2.02□□□□□ -2.09
SPG11-222ENST00000560435 TSPAN33Q86UF1 283 aa2.02□□□□□ -2.09
SPG11-222ENST00000560435 RTN4RL2Q86UN3 420 aa2.02□□□□□ -2.09
SPG11-222ENST00000560435 SLC25A42Q86VD7 318 aa2.02□□□□□ -2.09
SPG11-222ENST00000560435 CPOQ8IVL8 374 aa2.02□□□□□ -2.09
SPG11-222ENST00000560435 MAPKAPK5-AS1Q8N8E1 139 aa2.02□□□□□ -2.09
SPG11-222ENST00000560435 CHPT1Q8WUD6 406 aa2.02□□□□□ -2.09
SPG11-222ENST00000560435 SAAL1Q96ER3 474 aa2.02□□□□□ -2.09
SPG11-222ENST00000560435 MMABQ96EY8 250 aaPredicted RBP2.02□□□□□ -2.09
SPG11-222ENST00000560435 APOPT1Q96IL0 206 aa2.02□□□□□ -2.09
SPG11-222ENST00000560435 B3GALT6Q96L58 329 aa2.02□□□□□ -2.09
SPG11-222ENST00000560435 SEPT5Q99719 369 aaPredicted RBP2.02□□□□□ -2.09
SPG11-222ENST00000560435 ZNF577Q9BSK1 485 aa2.02□□□□□ -2.09
SPG11-222ENST00000560435 GPR63Q9BZJ6 419 aa2.02□□□□□ -2.09
SPG11-222ENST00000560435 MED20Q9H944 212 aa2.02□□□□□ -2.09
SPG11-222ENST00000560435 RIC8AQ9NPQ8 531 aa2.02□□□□□ -2.09
SPG11-222ENST00000560435 CNOT8Q9UFF9 292 aaKnown RBP2.02□□□□□ -2.09
SPG11-222ENST00000560435 VSIG4Q9Y279 399 aa2.02□□□□□ -2.09
SPG11-222ENST00000560435 FAM220BPB1ANY3 271 aa2.01□□□□□ -2.09
SPG11-222ENST00000560435 SMAD9O15198 467 aaKnown RBP2.01□□□□□ -2.09
SPG11-222ENST00000560435 THEGLP0DJG4 465 aa2.01□□□□□ -2.09
SPG11-222ENST00000560435 GPR68Q15743 365 aa2.01□□□□□ -2.09
SPG11-222ENST00000560435 ADIPOQQ15848 244 aa2.01□□□□□ -2.09
SPG11-222ENST00000560435 KLHL26Q53HC5 615 aa2.01□□□□□ -2.09
SPG11-222ENST00000560435 XKR3Q5GH77 459 aa2.01□□□□□ -2.09
SPG11-222ENST00000560435 RSBN1Q5VWQ0 802 aaPredicted RBP2.01□□□□□ -2.09
SPG11-222ENST00000560435 LINGO4Q6UY18 593 aa2.01□□□□□ -2.09
SPG11-222ENST00000560435 GALNT13Q8IUC8 556 aa2.01□□□□□ -2.09
SPG11-222ENST00000560435 CEP97Q8IW35 865 aa2.01□□□□□ -2.09
SPG11-222ENST00000560435 RNF168Q8IYW5 571 aaPredicted RBP2.01□□□□□ -2.09
SPG11-222ENST00000560435 KIRREL3Q8IZU9 778 aa2.01□□□□□ -2.09
SPG11-222ENST00000560435 GSDMBQ8TAX9 411 aa2.01□□□□□ -2.09
SPG11-222ENST00000560435 DAZLQ92904 295 aaKnown RBP2.01□□□□□ -2.09
SPG11-222ENST00000560435 STRA6Q9BX79 667 aa2.01□□□□□ -2.09
SPG11-222ENST00000560435 SLA2Q9H6Q3 261 aa2.01□□□□□ -2.09
SPG11-222ENST00000560435 SDR39U1Q9NRG7 319 aaPredicted RBP2.01□□□□□ -2.09
SPG11-222ENST00000560435 TAGLN3Q9UI15 199 aa2.01□□□□□ -2.09
SPG11-222ENST00000560435 CAMK2AQ9UQM7 478 aa2.01□□□□□ -2.09
SPG11-222ENST00000560435 E9PI62 339 aa2□□□□□ -2.09
SPG11-222ENST00000560435 TMCC2O75069 709 aa2□□□□□ -2.09
SPG11-222ENST00000560435 HPP00738 406 aa2□□□□□ -2.09
SPG11-222ENST00000560435 MGMTP16455 207 aa2□□□□□ -2.09
SPG11-222ENST00000560435 MORC3Q14149 939 aa2□□□□□ -2.09
SPG11-222ENST00000560435 MEP1AQ16819 746 aa2□□□□□ -2.09
SPG11-222ENST00000560435 LRIF1Q5T3J3 769 aa2□□□□□ -2.09
SPG11-222ENST00000560435 CDC73Q6P1J9 531 aa2□□□□□ -2.09
SPG11-222ENST00000560435 CPSF7Q8N684 471 aaKnown RBP2□□□□□ -2.09
SPG11-222ENST00000560435 OR8K5Q8NH50 307 aa2□□□□□ -2.09
SPG11-222ENST00000560435 VANGL1Q8TAA9 524 aaPredicted RBP2□□□□□ -2.09
SPG11-222ENST00000560435 TRPC4APQ8TEL6 797 aa2□□□□□ -2.09
SPG11-222ENST00000560435 ZNF582Q96NG8 517 aaPredicted RBP2□□□□□ -2.09
SPG11-222ENST00000560435 PSMB7Q99436 277 aa2□□□□□ -2.09
SPG11-222ENST00000560435 HEXA-AS1Q9H8Q6 139 aa2□□□□□ -2.09
SPG11-222ENST00000560435 RANGRFQ9HD47 186 aaPredicted RBP2□□□□□ -2.09
SPG11-222ENST00000560435 A4GALTQ9NPC4 353 aa2□□□□□ -2.09
SPG11-222ENST00000560435 TSPYL4Q9UJ04 414 aa2□□□□□ -2.09
SPG11-222ENST00000560435 DBNLQ9UJU6 430 aaKnown RBP2□□□□□ -2.09
SPG11-222ENST00000560435 SPIN1Q9Y657 262 aaPredicted RBP2□□□□□ -2.09
SPG11-222ENST00000560435 UMODL1Q5DID0 1318 aa1.99□□□□□ -2.09
SPG11-222ENST00000560435 TMEM8BA6NDV4 472 aa1.99□□□□□ -2.09
SPG11-222ENST00000560435 SHISA7A6NL88 538 aa1.99□□□□□ -2.09
SPG11-222ENST00000560435 A8MXK9 166 aa1.99□□□□□ -2.09
SPG11-222ENST00000560435 PAGE4O60829 102 aa1.99□□□□□ -2.09
SPG11-222ENST00000560435 SLC25A12O75746 678 aa1.99□□□□□ -2.09
SPG11-222ENST00000560435 B3GALT5-AS1P59052 145 aa1.99□□□□□ -2.09
SPG11-222ENST00000560435 GALNT2Q10471 571 aa1.99□□□□□ -2.09
SPG11-222ENST00000560435 GCNT6Q5T4J0 391 aa1.99□□□□□ -2.09
SPG11-222ENST00000560435 ADALQ6DHV7 355 aa1.99□□□□□ -2.09
SPG11-222ENST00000560435 INTS8Q75QN2 995 aaKnown RBP1.99□□□□□ -2.09
SPG11-222ENST00000560435 BTN2A1Q7KYR7 527 aa1.99□□□□□ -2.09
SPG11-222ENST00000560435 GALNT5Q7Z7M9 940 aa1.99□□□□□ -2.09
SPG11-222ENST00000560435 MYRIPQ8NFW9 859 aa1.99□□□□□ -2.09
SPG11-222ENST00000560435 OR6S1Q8NH40 331 aa1.99□□□□□ -2.09
SPG11-222ENST00000560435 MAPK15Q8TD08 544 aa1.99□□□□□ -2.09
SPG11-222ENST00000560435 CCT6BQ92526 530 aa1.99□□□□□ -2.09
SPG11-222ENST00000560435 ZNF486Q96H40 463 aaPredicted RBP1.99□□□□□ -2.09
SPG11-222ENST00000560435 SLC22A12Q96S37 553 aa1.99□□□□□ -2.09
SPG11-222ENST00000560435 TUBB1Q9H4B7 451 aa1.99□□□□□ -2.09
SPG11-222ENST00000560435 TBX20Q9UMR3 447 aa1.99□□□□□ -2.09
SPG11-222ENST00000560435 ARHGEF40Q8TER5 1519 aa1.99□□□□□ -2.09
SPG11-222ENST00000560435 LOC105371242A0A075B767 164 aa1.98□□□□□ -2.09
SPG11-222ENST00000560435 ELOVL7A1L3X0 281 aa1.98□□□□□ -2.09
SPG11-222ENST00000560435 ZNF840PA6NDX5 716 aa1.98□□□□□ -2.09
SPG11-222ENST00000560435 SHISA9B4DS77 424 aa1.98□□□□□ -2.09
SPG11-222ENST00000560435 PI4K2BG5E9Z4 385 aa1.98□□□□□ -2.09
SPG11-222ENST00000560435 SLCO2B1O94956 709 aa1.98□□□□□ -2.09
SPG11-222ENST00000560435 CAPGP40121 348 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms