RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 CLPTM1O96005 669 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 KRT6AP02538 564 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 KRT6BP04259 564 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 LINC00271P0C7V0 271 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 CHRM1P11229 460 aaPredicted RBP7.93□□□□□ -1.14
SMAD3-212ENST00000559937 PRPS2P11908 318 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 PABPC1P11940 636 aaKnown RBP7.93□□□□□ -1.14
SMAD3-212ENST00000559937 PRPH2P23942 346 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 AOAHP28039 575 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 HOXA9P31269 272 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 AKT1P31749 480 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 CA5AP35218 305 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 ARL1P40616 181 aaPredicted RBP7.93□□□□□ -1.14
SMAD3-212ENST00000559937 GRIA2P42262 883 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 KRT6CP48668 564 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 HNMTP50135 292 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 CCNHP51946 323 aaPredicted RBP7.93□□□□□ -1.14
SMAD3-212ENST00000559937 AP1S2P56377 157 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 MYBPC1Q00872 1141 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 APOFQ13790 326 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 BOP1Q14137 746 aaKnown RBP7.93□□□□□ -1.14
SMAD3-212ENST00000559937 CAPRIN1Q14444 709 aaKnown RBP7.93□□□□□ -1.14
SMAD3-212ENST00000559937 ATP6AP1Q15904 470 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 PHKG1Q16816 387 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 FUT11Q495W5 492 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 TIGD2Q4W5G0 525 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 CACHD1Q5VU97 1274 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 LRRC66Q68CR7 880 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 NANOGP8Q6NSW7 305 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 FAM117BQ6P1L5 589 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 BORAQ6PGQ7 559 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 SCIMPQ6UWF3 145 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 DLEU7Q6UYE1 221 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 GDPD4Q6W3E5 623 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 MSANTD1Q6ZTZ1 278 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 SPRED1Q7Z699 444 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 CARM1Q86X55 608 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 ZSWIM9Q86XI8 627 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 RASGRP3Q8IV61 690 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 RAVER1Q8IY67 606 aaKnown RBP7.93□□□□□ -1.14
SMAD3-212ENST00000559937 KIAA2013Q8IYS2 634 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 ALDH16A1Q8IZ83 802 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 CMTM8Q8IZV2 173 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 GALNT15Q8N3T1 639 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 GALNT4Q8N4A0 578 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 CLDN19Q8N6F1 224 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 OR52E4Q8NGH9 312 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 OR6K2Q8NGY2 324 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 HM13Q8TCT9 377 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 HCAR2Q8TDS4 363 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 USP7Q93009 1102 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 VPS33AQ96AX1 596 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 PPWD1Q96BP3 646 aaKnown RBP7.93□□□□□ -1.14
SMAD3-212ENST00000559937 TEX37Q96LM6 180 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 CNBD2Q96M20 576 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 CGREF1Q99674 301 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 FAM83CQ9BQN1 747 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 HAUS8Q9BT25 410 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 SLC12A9Q9BXP2 914 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 SLC46A2Q9BY10 475 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 TNKS2Q9H2K2 1166 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 ACTL8Q9H568 366 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 BRD9Q9H8M2 597 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 NANOGQ9H9S0 305 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 ELOVL2Q9NXB9 296 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 MARK1Q9P0L2 795 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 CLEC4EQ9ULY5 219 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 POLR3HQ9Y535 204 aaPredicted RBP7.93□□□□□ -1.14
SMAD3-212ENST00000559937 COMMD3-BMI1R4GMX3 469 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 KIF26AQ9ULI4 1882 aaPredicted RBP7.93□□□□□ -1.14
SMAD3-212ENST00000559937 LRRK1Q38SD2 2015 aa7.93□□□□□ -1.14
SMAD3-212ENST00000559937 PABPN1LA6NDY0 278 aaKnown RBP7.92□□□□□ -1.14
SMAD3-212ENST00000559937 ULK1O75385 1050 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 RSL1D1O76021 490 aaKnown RBP7.92□□□□□ -1.14
SMAD3-212ENST00000559937 CSPG5O95196 566 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 KCNH1O95259 989 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 CLDN9O95484 217 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 GUCA1CO95843 209 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 IL6P05231 212 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 POU2F2P09086 479 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 C1SP09871 688 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 SPATA31D3P0C874 917 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 G6PDP11413 515 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 CDH1P12830 882 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 SLC2A4P14672 509 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 CSF2RAP15509 400 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 PTPN2P17706 415 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 ITGB6P18564 788 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 CYP2A7P20853 494 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 MYF6P23409 242 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 MAPK1P28482 360 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 HLA-FP30511 346 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 GKP32189 559 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 VIPR1P32241 457 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 MAPK9P45984 424 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 RECQLP46063 649 aaPredicted RBP7.92□□□□□ -1.14
SMAD3-212ENST00000559937 GNPDA1P46926 289 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 SLC6A12P48065 614 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 SPINT3P49223 89 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 STK19P49842 368 aaPredicted RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms